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Properties
| Property Name | Value |
|---|
| Product | Ubiquitin-associated/translation elongation factor EF1B |
| Orig transcript id | gnl|cribi|Naga_100002g33.4832.mrna |
| Orig protein id | gnl|cribi|Naga_100002g33.4832 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:623799..625639 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1985 ID=rna1985|Name=rna1985|organism=Nannochloropsis gaditana|type=mRNA|length=1014bp
ATGCTCCAACGCGAAATCTCGAAAGGCTTGCGGTTTATCCGCAGACGGGT
CCTTTTTTTGGTCTATATCTGCTTTTTTACGTGTAATTTACATGGCATGG
CTTTCTTATTGCGGGCTGGTGTCAAAGCACGAAAAGAGTACCTGTGGCAT
GACAGTATACCTCATCTCTCTAGCGGTGGGCTTAAAAGTAGATGCTTGTG
TGCAGGGCCTCAACGGGAAGGCGGCAAGAAGGAATACACCGACATACACG
CATTACAGGACGGTAATGAGGCCTTGTGCGCGGAGGACTCGATTGAAAAT
GGCGGGATGCGGTCAGAGCAAAACAAGACACTGTCATCTCGTGCTGGTGC
AAAGAAAAAATTGAGGGCCATCCGGCAGCATGTCAACCCGCTATCCTCGC
TCTATCAGAGACCTGCGAATATATCTGCGAAATGGGTCGAGGACGCTTTT
GCGAACCCCAGTCTCCCGTTTCATATCGACATTGGCTCGGCTCGAGGCCG
ATTTTGTATATATATGGCAAGAGAACACCCTGACATGAATTTTTTGGGAC
TGGAAATTCGTCGCCCCTGCGTGGAGGAGTCCTTCAAGAAAATGGAGAAA
TACAGGGTCAAGGACAACGTGCACTTTTTAGCGCTGAACGTCAATGTTGA
TCTGGAGCGGATTGTAGCGGATGTGCGAAAGCACAGCGAGATTGTGCGAT
ATAGTGTACAATTTCCAGATCCCCACTTCAAGACCAAGCATAAAAAGCGA
CGTGTCATACAACCCGCCCTCGTCGCTTGCATGTGCAGTAGCCTTAAGTC
CGATGGAGGGGAGATCTTCATCCAGTCGGACGTGGAGGAGGTCGCAGTCT
CCATGCGTGATGCTTTCAAAGAGTCCACTCTCGTCGCAGACGCGAGCGCG
TCCGGCGCGTGGATGGAGGAAAACCCACTCAAGGTGCCGACTGAACGGGA
GGTGCTGACGCTCTCTAGAGGAGACCCCGTTTACCGGACAGTTTTTTGCC
GGGACAACCATTGA back to topprotein sequence of rna1985 >rna1985-protein ID=rna1985-protein|Name=rna1985|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGF
PPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQ
QIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVP
VTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIAD
CVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVA
IEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQ
FPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALL
HARETNHQNFGEYKSS back to topmRNA from alignment at CM002458.1:623799..625639+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1985 ID=rna1985|Name=rna1985|organism=Nannochloropsis gaditana|type=mRNA|length=1841bp|location=Sequence derived from alignment at CM002458.1:623799..625639+ (Nannochloropsis gaditana)
CGCCGCGGCATAAAACATGCTCGTGAAATGGGAGCAGTAAGGACGGCTTA
GCAGCTGTAGTAGGTGCCAGTACCTGCACTGTCGGCGGCGACAAGGCAAG
GGCAACAGGGGCTTGGAGACCAGTTGAGGATAACAAGGGATGCGCGGCCT
GCACGCCGCACAAATGTCCATCATCGATCTTCCTTAACGTAGTCGGAATT
CCAGCCTGCTGTCGATATCAGGCATTTTGTTGTGGTTTACCTAGTGCTCC
CGGCATACTCTGTGACCCCCTCATTTTCATCGAGGACCAGCTTTCCTAAC
TTTGATTCCTTGTAACGTCCAGGCAGCTCACGTCCAGTGCGTACCAATCC
CGCGCCCCGTCCAGAGTGCGAAGCACAACGGCCGACAAAAACAAGGTGGC
ACGCAATATTTGGAAATGAATACAGAGGGAAATCTTGGCTTGCGTGGGGT
TCGTCGCCCGCAAATTATCGGGGACGCCCTTGATGTCTTTTTCGTGAAGC
TGAGGAGGCTTCTTGTCTCATGTTTTCGCATCGTTCTTAGATATACACGA
GAAATTGACTTTAAACTCCTTGATATTCTCACAGCATGCCATTGACATTG
AAAGTCAATGGCCCGGGTGGAAAAAGTGCTATTTTAAAGGGTTTGAAGGA
TTCGGCAACGCTGCAGCAGCTTCAAATAAAAATCGAGGAGCTCTTGGGGG
TCCCAATGGCTCAGCAGAAGCTCCGGGCGGGATTCCCCCCCAAAGACATG
ACATTGCAGGATTTAACAGCTGAATTGACTTCTTTAGGGATTCAGACCGG
GAGCGCAATAACAGTCGTCAAAGAAGACACACAGTTTACTTCGGGTGATA
AGGCTCCCATTCCTGTCACGTTGCCTGGGGCCCAGCAAATAATCGACATG
GGGTTTTCTGTTGCCGTAGCATTGAAAGCTCTAGAGGTATCCCATGGGGA
AGTTGAAAATGCTCTGGATCTATGCGTGAACGGTATTATCACAGATGAGT
CCCTGGAACATGTTCCGACAGCGCCCCCCGTTCCGGTCACTTCGCACGGT
GGGATGACCACGGCGAACAGAGTAATGGTTAGGCGTGTAATAGATGCAGA
CAATAGTTGTCTATTTAATGCCGTGGGTTACTGCATGGAGAAGAATCGGA
GAATAGGTCCTAAGCTGCGGAAAATCATTGCAGATTGCGTGCGAAACTCG
CCCGATGTGTACACAGAGGCAGTGCTCGGAAAAGCACCCAAACAGTACTC
AGATTGGATTCAAGACCCTGCTCAATGGGGCGGCGAAATAGAGTTGTTCA
TCCTCTCGCAATATTATGGCTGCGAAGTTGTAGCAATTGAGATTAAAAGT
GCACACGCTTATGTgtatggggaggggaaaaactATTCACGCCGCATATA
TTTGCTGTATGATGGGGTGCACTACGATGCTTTGGCCATGGCGGCGGGAT
CTCCCACTGCGCCCGAGTCATTGGACATGACTCAGTTTCCTGCAGGGGAC
GAAAGCAGCAAGCAGGCAGCCCTGGCGGTGGCCGCCGAGTTAAAAGAGGG
TCGACAATTTGTTGATCTGCTTGGCTGCACCTTGCGGTGTATGGTGTGCA
ATAAGGGCCTTtcagggcaggaggaagcacTGCTCCATGCTCGTGAAACG
AATCATCAGAATTTTGGTGAATACAAGTCGTCATGAACATGGACAAGTGA
TTTGCACTTGTCATACCACAAAATATGAATGCTGTACAGGAGAGAGCATC
TTTCCAGCAAAATACCATGTTTGCAAGTCATAGAAAGTTAAGAGCAATAA
ATTTAAGTATGTGATTGATATATGAACGGTTGATGTATCGG back to topCoding sequence (CDS) from alignment at CM002458.1:623799..625639+ >rna1985 ID=rna1985|Name=rna1985|organism=Nannochloropsis gaditana|type=CDS|length=1101bp|location=Sequence derived from alignment at CM002458.1:623799..625639+ (Nannochloropsis gaditana)
ATGCCATTGACATTGAAAGTCAATGGCCCGGGTGGAAAAAGTGCTATTTT
AAAGGGTTTGAAGGATTCGGCAACGCTGCAGCAGCTTCAAATAAAAATCG
AGGAGCTCTTGGGGGTCCCAATGGCTCAGCAGAAGCTCCGGGCGGGATTC
CCCCCCAAAGACATGACATTGCAGGATTTAACAGCTGAATTGACTTCTTT
AGGGATTCAGACCGGGAGCGCAATAACAGTCGTCAAAGAAGACACACAGT
TTACTTCGGGTGATAAGGCTCCCATTCCTGTCACGTTGCCTGGGGCCCAG
CAAATAATCGACATGGGGTTTTCTGTTGCCGTAGCATTGAAAGCTCTAGA
GGTATCCCATGGGGAAGTTGAAAATGCTCTGGATCTATGCGTGAACGGTA
TTATCACAGATGAGTCCCTGGAACATGTTCCGACAGCGCCCCCCGTTCCG
GTCACTTCGCACGGTGGGATGACCACGGCGAACAGAGTAATGGTTAGGCG
TGTAATAGATGCAGACAATAGTTGTCTATTTAATGCCGTGGGTTACTGCA
TGGAGAAGAATCGGAGAATAGGTCCTAAGCTGCGGAAAATCATTGCAGAT
TGCGTGCGAAACTCGCCCGATGTGTACACAGAGGCAGTGCTCGGAAAAGC
ACCCAAACAGTACTCAGATTGGATTCAAGACCCTGCTCAATGGGGCGGCG
AAATAGAGTTGTTCATCCTCTCGCAATATTATGGCTGCGAAGTTGTAGCA
ATTGAGATTAAAAGTGCACACGCTTATGTgtatggggaggggaaaaactA
TTCACGCCGCATATATTTGCTGTATGATGGGGTGCACTACGATGCTTTGG
CCATGGCGGCGGGATCTCCCACTGCGCCCGAGTCATTGGACATGACTCAG
TTTCCTGCAGGGGACGAAAGCAGCAAGCAGGCAGCCCTGGCGGTGGCCGC
CGAGTTAAAAGAGGGTCGACAATTTGTTGATCTGCTTGGCTGCACCTTGC
GGTGTATGGTGTGCAATAAGGGCCTTtcagggcaggaggaagcacTGCTC
CATGCTCGTGAAACGAATCATCAGAATTTTGGTGAATACAAGTCGTCATG
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