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Properties
| Property Name | Value |
|---|
| Product | 16s rrna methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100002g37.4899.mrna |
| Orig protein id | gnl|cribi|Naga_100002g37.4899 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:618416..619886 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1981 ID=rna1981|Name=rna1981|organism=Nannochloropsis gaditana|type=mRNA|length=2106bp
ACCTGCGTGAACCATACAAAGTACAGTGACGCACAGAGTGGCTTATCTTT
AAGTACGTCGCACTGCCGGAATGCTGTGTTGATCATTCATTTTCCTCTTC
TCTTACGTCTCTCAATCCGGCCGAAGTCAGACCCCGGGAAATGAAGGCCA
TGGCTCCAATACTACTCGCATGCTGCATGTCTGGGGCTAGCGCTGCCGCT
GCAGCTGACGGCTTCATGACCCGTTGTACCCGTGCCTTTGTTTGGCCAAT
GGCTCCCAAAATGACGTCGTTCGCGGCTCGTCGTACATTTTGTACAAGAC
ATGCCCTGATATCGGCGGCTTCGACTGTAGCTGAAGGCAAAGCACTTGAT
GGACGTGTGCACACGGAGCATCCAATGAACAATGTGCCCGTAACCCTTTC
CGGAAAAATTGGTCGGGACTTGCATCGGAACCCTAGCCATCCTCTAGGTA
TCATCAAGGACCGCATCGAGGGATACTTTAAAGAGCGCGCCGCCACCACG
GGCGTGGCGGTGGAGTGCTTCGACAACCTTTTTCCCGTCGTCCCGATCGT
CAATAATTTTGACGATTTGCTGATTCCGCCTGACCACGTATCTCGGTCAC
CCATAGATACCTACTATGTGGATGACAAGCAAGTGCTCCGCACGCACACG
AGCGCGCATCAAAGTACCATGCTGGGAAAGGGGTTGGAGGCTTTCCTAGT
CACAGGAGACGTTTATCGACGCGACGAGATTGACAGGACACATTATCCTG
TTTTCCATCAGATGGAGGGCGTGCGGATCTTCCCAGGTCTGCTTGAAAGC
CGCGGGAGTCGGGAGGAGGGGGTGAAGGAAGTGGAGAAGGACCTAAAGGA
GGCCTTGGAGGGGATGGTGGTGACGCTCTTTGGCGATGTTGAGCGGCGAT
GGGTGGACACGTATTTTCCTTTTACAGACCCCTCGTTTGAGCTTGAGATC
TTCTACAACGACGAGTGGTTGGAGGTTTTAGGCTGTGGAGTGATGCAGCA
AGAAATCGTCCGACGAGCGGGGAAGGGAGAGACGCTGGGATGGGCCTTTG
GGCTGGGGTTGGAGCGTCTGGCCATGGTTTTGTTCCAAATTCCTGATATC
CGACTGTTCTGGTCGACAGATGAACGCTTCACTAAACAGTTCGAGGCGGG
AAAGATCACTACATTCGCTCCTTTCAGCAAGTATCCTCCCTGCTATAAAG
ACGTGTCTTTTTGGATAGATAAGGTGGCAGGATTCAACAACAATGATTTT
TTTGAGATCGTCAGGGGAGTGGGCGGAGATTTGGTCGAGTCCGTTGTGCT
AGTGGATGAGTTCGTGCATCCGAAAACGGGGCGGGCGAGCAAATGCTTTA
GGGTCAACTACCGGTCGATGGAGCGCTCTTTGACGAACGAGGAGATAGAT
GTCTTACAGGAGGAGGTTCGCACTCAAATGTCAGATGCGTTGAAAGTCGA
GTTACGGTAAAACGGCGGTGACATGCAGTCCCCATCATCAGGAGCGGCTA
TTGGCTGTGGCCAGTATTGTCCGCTCCTTAGTTTGGCATCGTGGCCCTCG
TCAGGTCTGAGAGATGGTCAGCGGGGACATGCCGGGGTTGGAAGCGAGCT
CATGCAGGGCAGCAGGCAAGTCTCACATACGGTGACGCCCCAAAAATTGC
TCCAGCTAAAGACGTAGTCCGGGAGGAAGAACATTGAAAAGTATGTTGTG
GCTACAACAAAAATGGGAGTGCGACGGTAAATTGATTGGAAAGAGGTAAT
AAGACAGGTGTTTATGACAGTATAGCACTAGGTCGGCGGGTATAGTCAAG
GTTTCAAATACAAAAGCACTGACCAAGGTTCTTGAGGCAACCCACGACGG
TAGTGGTGAGGGCGCTATTGTGATGCGTGCAGAGGAATGTGGCATAGTTC
AATAATGAGCCCGTCCCTGCTGCGAGAAAGAAGACAATCAGAAATGTGGG
ATCTTTCAAAGAGGGGAAATTCTTGATTGCTTGCAGCTCCCTCGGACGAC
AGAAGAGTAGAGTAGTCATGAAAACAGCTCTGTACGTGGCGAAATGGAAA
GTTATTGAATTGTAAAGAGATAAGAGGACAATTTTATTGAAGTTCAAATA
TAAACG back to topprotein sequence of rna1981 >rna1981-protein ID=rna1981-protein|Name=rna1981|organism=Nannochloropsis gaditana|type=polypeptide|length=295bp
MKGGDEIALDSTMPSTGRKEAKDTKRKKRKRTKITEQETPEEVSAARDPQ
KQIPVSRAGFTAQAKARFPELTPVQWERLERLGALVQEWNCKVNVISRKD
VENVLSHHVLPCMGISKLLSKAAEGTKVMDVGTGGGFPGLPLAICCPQVK
FWLVDSIGKKVRVVGDMAVRLGLQNVRVRHTRVEEVRERFNFVTGRSVTA
MPRFVGWVKDKLHAAPSAPLKGVPDDGILYIKGGVSDETQEEDLGGWMPT
GRYPIGELIGGDVYGGDKSVLHFSVQDLRRGPDANAKGRGGNVRR back to topmRNA from alignment at CM002458.1:618416..619886+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1981 ID=rna1981|Name=rna1981|organism=Nannochloropsis gaditana|type=mRNA|length=1471bp|location=Sequence derived from alignment at CM002458.1:618416..619886+ (Nannochloropsis gaditana)
atgaatGATCAACACAGCATTCCGGCAGTGCGACGTACTTAAAGATAAGC
CACTCTGTGCGTCACTGTACTTTGTATGGTTCACGCAGGTCGTCCAGGCG
CATCGGCGCCGCCTTCCGTCTAGGGGGTACGTGTCTCGCAGGCAGGTATC
CtccgaggcgggggcggtggctcCCGCAGGGGCACGACGGCGAGCGCAGG
CGAGCACTCCCACCTAACTACGCGTCGTCCTAAGCTATTCAATCGCGTGA
AACTCATCAAGTGCCCTATTGGACTACCTATTTGTTCGTTTCAACACTTA
GAAAACACTGGGGAAAATCACAGCGAAAATAAAGGCGTGGCACGGGCATA
GAGAAGGCGAAATCTGAAGCCCGAGAACGAGACCTGAACAGGGACTTCAA
GcacgcagcagcagcaggcgaaCAGCTCCCTGAGTGTCCTCCTATCGTGT
ATGCTCTGTATGTCCTTCTGAGTGTTCCCTCTGCATTATATTCTTGTACA
AGCCGAAATGAAGGGCGGGGATGAGATCGCCCTTGATAGCACGATGCCGA
GTACAGGCAGGAAAGAAGCAAAGGAcacgaaaaggaagaagagaaagcgg
aCCAAGATCACTGAGCAGGAGACGCCAGAGGAGGTCTCTGCTGCTCGAGA
TCCCCAAAAACAAATACCGGTGTCACGTGCGGGGTTCACGGCGCAGGCGA
AAGCTCGGTTTCCGGAGCTGACGCCTGTTCAGTGGGAGAGGCTCGAGCGC
CTCGGAGCCCTCGTACAAGAGTGGAACTGTAAGGTGAACGTCATCAGCAG
AAAAGACGTGGAGAATGTGCTTTCACACCACGTGCTTCCCTGCATGGGGA
TATCAAAACTTTTGTCCAAGGCAGCAGAGGGCACAAAAGTGATGGACGtt
gggacgggggggggcttcccgggcctccccctggccaTTTGCTGTCCGCA
AGTCAAGTTCTGGCTGGTGGATTCGATAGGGAAGAAGGTGCGAGTCGTTG
GTGACATGGCTGTCCGCCTGGGTCTCCAAAACGTGAGGGTGCGGCACACT
CGGGTGGAAGAAGTCCGCGAGAGATTCAATTTCGTTACGGGCCGCTCCGT
GACGGCCATGCCTCGCTTCGTCGGCTGGGTGAAGGACAAGCTTCATGCAG
CACCTTCCGCGCCTTTAAAAGGGGTTCCAGACGATGGTATCTTGTATATC
AAGGGCGGTGTCAGCGACGAGACCCAGGAAGAAGACTTAGGCGGGTGGAT
GCCGACGGGGAGGTATCCAATCGGCGAGTTGATTGGCGGGGACGTCTACG
GTGGGGACAAGAGCGTCCTACATTTCTCTGTGCAGGACTTACGCCGCGGA
CCCGATGCGAATGCAAAAGGGCGGGGTGGAAACGTTCGTAGATAAGAGCT
GGTTGAGAAGCGTGGAAGGAACGTAACCAAGGAGTCGTTGCTAGCCCAAG
TACCCGAGCATCGGCATCACC back to topCoding sequence (CDS) from alignment at CM002458.1:618416..619886+ >rna1981 ID=rna1981|Name=rna1981|organism=Nannochloropsis gaditana|type=CDS|length=888bp|location=Sequence derived from alignment at CM002458.1:618416..619886+ (Nannochloropsis gaditana)
ATGAAGGGCGGGGATGAGATCGCCCTTGATAGCACGATGCCGAGTACAGG
CAGGAAAGAAGCAAAGGAcacgaaaaggaagaagagaaagcggaCCAAGA
TCACTGAGCAGGAGACGCCAGAGGAGGTCTCTGCTGCTCGAGATCCCCAA
AAACAAATACCGGTGTCACGTGCGGGGTTCACGGCGCAGGCGAAAGCTCG
GTTTCCGGAGCTGACGCCTGTTCAGTGGGAGAGGCTCGAGCGCCTCGGAG
CCCTCGTACAAGAGTGGAACTGTAAGGTGAACGTCATCAGCAGAAAAGAC
GTGGAGAATGTGCTTTCACACCACGTGCTTCCCTGCATGGGGATATCAAA
ACTTTTGTCCAAGGCAGCAGAGGGCACAAAAGTGATGGACGttgggacgg
gggggggcttcccgggcctccccctggccaTTTGCTGTCCGCAAGTCAAG
TTCTGGCTGGTGGATTCGATAGGGAAGAAGGTGCGAGTCGTTGGTGACAT
GGCTGTCCGCCTGGGTCTCCAAAACGTGAGGGTGCGGCACACTCGGGTGG
AAGAAGTCCGCGAGAGATTCAATTTCGTTACGGGCCGCTCCGTGACGGCC
ATGCCTCGCTTCGTCGGCTGGGTGAAGGACAAGCTTCATGCAGCACCTTC
CGCGCCTTTAAAAGGGGTTCCAGACGATGGTATCTTGTATATCAAGGGCG
GTGTCAGCGACGAGACCCAGGAAGAAGACTTAGGCGGGTGGATGCCGACG
GGGAGGTATCCAATCGGCGAGTTGATTGGCGGGGACGTCTACGGTGGGGA
CAAGAGCGTCCTACATTTCTCTGTGCAGGACTTACGCCGCGGACCCGATG
CGAATGCAAAAGGGCGGGGTGGAAACGTTCGTAGATAA back to top
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