EWM28782.1, cds1965 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|585111205|gb|EWM28782.1| (rna (guanine-9-)-methyltransferase domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 Query: 1 MEPKRSANSAAEAVRDASEDTLSIPAPPSASAPSSSTPVKGGNLFLFRKPSRVKDVSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNEPAVNKDS 332 MEPKRSANSAAEAVRDASEDTLSIPAPPSASAPSSSTPVKGGNLFLFRKPSRVKDVSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNEPAVNKDS Sbjct: 1 MEPKRSANSAAEAVRDASEDTLSIPAPPSASAPSSSTPVKGGNLFLFRKPSRVKDVSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNEPAVNKDS 332
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|1214710777|gb|OWZ21837.1| (RNA (guanine-9-)-methyltransferase [Phytophthora megakarya]) HSP 1 Score: 192.2 bits (487), Expect = 4.449e-56 Identity = 103/271 (38.01%), Postives = 157/271 (57.93%), Query Frame = 0 Query: 56 VSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSP-VLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNE 325 +SK +K R+ W+ +K KK KR Q + +G + L++ + +LR++ R K + A+L EEG +VVIDCGF+ +MTEKE +SL QQ+M+ Y N+R+ P +I L I++ L ++G WQ F + +++ + +++ LVYLT+DSPN +++L +Y+IGGIVDRNRLK TY KA+ +GI TA+ PL V+LGS+ VL VNHVF+IL +F DW LP+RK ++ + Sbjct: 10 LSKRALRKEKRRMQWEERKVEKKL-KRQENQRVKKANGLIPPPKELDMS-------EEAVLRRKERAMAKRE------AYLMAAEEGVKVVIDCGFEENMTEKEKRSLSQQIMFSYGVNRRSPTPMNTYITSLHGDIKKNLEKISGFHEWQAFTGSSNSYLDLF--KKESLVYLTADSPNTISKLSRDKVYIIGGIVDRNRLKGITYQKAVEEGIETAKLPLDAVVELGSATRVLTVNHVFEILAQFSEIKDWAQATLATLPSRKGAQLKQ 264
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|1173949772|gb|OQR97776.1| (RNA (guanine-9-)-methyltransferase domain-containing protein [Achlya hypogyna]) HSP 1 Score: 192.2 bits (487), Expect = 7.930e-56 Identity = 105/271 (38.75%), Postives = 152/271 (56.09%), Query Frame = 0 Query: 54 KDVSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLG-SSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKV 323 K+ K ++ RQE+W K K+A K AR + V L++ A ++ ++ + K+ +FL EG +VIDCGF+ M+ KE KSL QQ+M+ Y NKR +P TV + L + L + G W F+ T+ +M+T+ ++ LVYLT+DSPNV+ +L +Y+IGGIVDRNRLK ATY KA+AQGIATA+ PL + V++G ++ VL VNHVF IL+++Q DW LP RK + Sbjct: 28 KNSGKRALRRAKRQEIWVSVKERKRAKKEEARAARPKAPEPV-----LDMSEAAVLARRERTIAKRE-------------SFLMAANEGPTIVIDCGFEEDMSSKEKKSLSQQIMFSYGINKRCESPATVFLTSLHGETEANLQKIGGFSEWLAFDATTKCYMDTF--RKESLVYLTADSPNVIEELSSDKVYIIGGIVDRNRLKGATYEKAVAQGIATAKLPLDKVVEMGQATRVLTVNHVFQILVDYQTKQDWTQATMSALPARKGAHI 278
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|953499128|emb|CEG39440.1| (rna (guanine-9-)-methyltransferase domain-containing [Plasmopara halstedii]) HSP 1 Score: 187.193 bits (474), Expect = 7.823e-54 Identity = 96/211 (45.50%), Postives = 133/211 (63.03%), Query Frame = 0 Query: 119 QRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSP-VLAVNHVFDILLEFQYTNDW-RATFAKVLPNRKSVKVNEPA 327 +RRE+ +R MA EEG++VVIDC FD M+EKE KSL QQ+M+ Y N+R+ P V+I L +++ L ++G WQ F + +M+ + +++ LVYLT+DSPN +T+L +Y+IGGIVDRNRLK TY KA+ QGI TA+ PL V +GS+ VL VNHVF+IL F +W +AT A LP+RK V E + Sbjct: 84 RRRERNIAKRETLLMA----AEEGSKVVIDCAFDDKMSEKEKKSLSQQIMFSYGVNRRSSMPMNVYITSLHGDVRKNLEKISGFHEWQTFAESSLSYMDIF--KKESLVYLTADSPNTITKLCRDKVYIIGGIVDRNRLKGITYEKAIKQGIETAKLPLDAVVDMGSATRVLTVNHVFEILTHFSKVKNWAQATLA-TLPSRKGVHFKETS 287
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|695376083|ref|XP_009515698.1| (hypothetical protein PHYSODRAFT_477148 [Phytophthora sojae] >gi|348688609|gb|EGZ28423.1| hypothetical protein PHYSODRAFT_477148 [Phytophthora sojae]) HSP 1 Score: 186.037 bits (471), Expect = 3.006e-53 Identity = 109/271 (40.22%), Postives = 159/271 (58.67%), Query Frame = 0 Query: 56 VSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSP-VLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNE 325 +SK +K + W+ +KA+KK KR +Q + SGE+ L++ + +LR++ R K + AFL EEG +VVIDC F+ MTEKE KSL QQ+M+ Y N+R+ P + +I L IQ+ L ++G WQ F + +++ + +++ LVYLT+DSPN +T+L +Y+IGGIVDRNRLK TY KA+ QGI TA+ PL V++GS+ VL VNHVF+IL +F DW LP+RK ++ E Sbjct: 42 LSKRAKRKQKHRMQWEERKASKKL-KRQEQQRLKKASGEIPPPKELDMS-------EEAVLRRKERALAKRE------AFLMAAEEGVKVVIDCEFEEEMTEKEKKSLSQQIMFSYGVNRRSRTPMSAYITSLHGDIQKNLEKISGFHEWQAFTGSQKSYIDLF--KKESLVYLTADSPNTITKLSRDKVYIIGGIVDRNRLKGITYQKAVEQGIETAKLPLDTVVEMGSATRVLTVNHVFEILAQFSEVKDWAQATLSTLPSRKGAQLKE 296
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|669144700|ref|XP_008607912.1| (hypothetical protein SDRG_04039 [Saprolegnia diclina VS20] >gi|530740078|gb|EQC38320.1| hypothetical protein SDRG_04039 [Saprolegnia diclina VS20]) HSP 1 Score: 183.341 bits (464), Expect = 2.723e-52 Identity = 89/210 (42.38%), Postives = 129/210 (61.43%), Query Frame = 0 Query: 115 LLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLG-SSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKV 323 L+RK+R ++ +FL EG +VIDCGF+ MT KE KSL QQ+M+ Y NKR+ P VH+ + + L+ + G +W F+ + +M+ + ++ LVYLT+DSPNV+ +L +Y+IGGIVDRNRLK TY KA+AQGIATA+ PL + +++G ++ VL VNHVF IL+ ++ DW LP RK +V Sbjct: 84 LMRKERAIAKRE-------SFLMAASEGPTIVIDCGFEEAMTSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVF--RKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVLEMGQATRVLTVNHVFQILVNYRTAQDWTQATLSALPARKGAQV 284
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|813218974|ref|XP_012210864.1| (hypothetical protein SPRG_16203 [Saprolegnia parasitica CBS 223.65] >gi|641523656|gb|KDO18434.1| hypothetical protein SPRG_16203 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 182.185 bits (461), Expect = 6.941e-52 Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = 0 Query: 115 LLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLG-SSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKV 323 L+RK+R ++ +FL EG +VIDCGF+ M+ KE KSL QQ+M+ Y NKR+ P VH+ + + L+ + G +W F+ + +M+ + ++ LVYLT+DSPNV+ +L +Y+IGGIVDRNRLK TY KA+AQGIATA+ PL + +++G ++ VL VNHVF IL+ ++ DW LP RK +V Sbjct: 75 LMRKERAIAKRE-------SFLMAASEGPTIVIDCGFEEAMSSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVF--RKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVLEMGQATRVLTVNHVFQILVNYRTAQDWTQATLSALPARKGAQV 275
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|301117816|ref|XP_002906636.1| (RNA (guanine-9-)-methyltransferase domain-containing protein, putative [Phytophthora infestans T30-4] >gi|262107985|gb|EEY66037.1| RNA (guanine-9-)-methyltransferase domain-containing protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 180.644 bits (457), Expect = 1.213e-51 Identity = 89/203 (43.84%), Postives = 127/203 (62.56%), Query Frame = 0 Query: 120 RREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPC--TVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSP-VLAVNHVFDILLEFQYTNDWRATFAKVLPNRK 319 RR++R N + EA +L EEG +VVIDC F+ MT+KE KSL QQ+M+ Y N+++ P V+I L + L + G W F ++ +M+ + +++ LVYLT+DSPN++T+L +Y+IGGIVDRNRLK TY KA+ QGI TA+ PL V++G++ VL VNHVF+IL +F DW LP+RK Sbjct: 49 RRKERANAKREA---YLMAAEEGVKVVIDCEFEEKMTDKEKKSLSQQIMFSYGVNRKSRTPMKYVVYITSLHGDTRNNLENICGFHEWLAFTESSKSYMDFF--KKESLVYLTADSPNIITKLSRDKVYIIGGIVDRNRLKGITYEKAVEQGIETAKLPLDAVVEMGAATRVLTVNHVFEILAQFSEIKDWAQATLATLPSRK 246
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|1013946622|gb|KYR00297.1| (putative RNaseIII [Dictyostelium lacteum]) HSP 1 Score: 183.341 bits (464), Expect = 1.587e-51 Identity = 101/273 (37.00%), Postives = 152/273 (55.68%), Query Frame = 0 Query: 56 VSKSVAKKLWRQEMWKVKKATKKAAKRAARQETNRQSGEVGQDDNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAER-DKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNEPA 327 +SK+ KKL R E W +KA KK + +++ ++ E+ +++N A + +K +R + + + V+ID M E+E KSL Q+ ++Y +N+ A P + ++ + I+ + + G +NW G +R ++ + + Y+ +R LVYL+SDSPNV+T LDP IY+IGG+VD NRLK TYNKA QGI TA+ P+ E +QL S VLAVNHVFDIL + NDW+ F V+P R K NE A Sbjct: 46 LSKNQQKKLIRSEKWAKQKAEKKDELKQRQKDNKKKRKEMMTPEDINKLAEIN---------------KKKKRDPSHLQY------SGTVLIDLEECDKMAEREQKSLVTQVQFLYGTNRLAEKPFHIELSGFQSQIKDKFERMVGFENWTGIDRYSQSYFDKYSKDRLQDLVYLSSDSPNVITTLDPSKIYIIGGLVDHNRLKGLTYNKATTQGIYTAKLPISEFIQLQSRKVLAVNHVFDILSHYTECNDWKKAFETVIPLR---KFNESA 294
BLAST of EWM28782.1 vs. NCBI_GenBank
Match: gi|1109210024|ref|XP_019179453.1| (PREDICTED: tRNA (guanine(9)-N1)-methyltransferase isoform X3 [Ipomoea nil]) HSP 1 Score: 183.726 bits (465), Expect = 2.514e-51 Identity = 115/340 (33.82%), Postives = 177/340 (52.06%), Query Frame = 0 Query: 1 MEPKRSANSAAEAVRDASEDTLSIP------APPSASAPSSSTPVKGGNLFLFRKPSRVKDVSKSVAKKLWRQEMWKVKKATKKAAKRAARQ-ETNRQSGEVGQD-DNLNLQAATSESKNDQLLRKQRREQRKNQRHEAQMAFLRRCEEGARVVIDCGFDSHMTEKELKSLGQQLMYVYASNKRALAPCTVHIAELGAGIQQRLSCVAGVQNWQGFNRETRPFMETYAAERDKLVYLTSDSPNVLTQLDPGLIYVIGGIVDRNRLKHATYNKALAQGIATARFPLREHVQLGSSPVLAVNHVFDILLEFQYTNDWRATFAKVLPNRKSVKVNEPAVNKDS 332 + P S++ A+ S+D S P PP+ SAP P+ SK KKL +Q+ ++ KKA KKA + +Q E R+ E + ++ + + + +R++R E+R ++ + R E G +ID F MT EL SL QQ+MY YA N R +P + +A +Q L G W +E+RP++E + +++ LVYLT+DS NVL +LDP +Y+IGG+VDRNR K T KA QGI TA+ P+ ++++ SS VL VN V +ILL+F DW+A+F +V+P RK + V+ ++ Sbjct: 32 LHPFASSHCLLVAMESNSDDHQSPPLATATSPPPATSAPDQQPPL-----------------SKRAQKKLLKQQRFEAKKAEKKAQLKEHKQREAERKRREWAERLAGMSEEEKLKLIEERKSVRRERMEKRSEEKGKKIERLTRAKESGQNFIIDLEFSDLMTSNELHSLVQQIMYCYAVNGRCASPAHLWLAGYQGEMQNLLEKTPGYDKWL-IEKESRPYIEAFEDQKEDLVYLTADSVNVLDELDPKKLYIIGGLVDRNRWKGITMKKAEEQGIQTAKLPIGNYLKMSSSQVLTVNQVVEILLKFLELRDWKASFFEVIPQRKRCGADSEDVDDEA 353 The following BLAST results are available for this feature:
BLAST of EWM28782.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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