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Properties
Property Name | Value |
Product | elongation factor ts |
Orig transcript id | gnl|cribi|Naga_100002g92.4797.mrna |
Orig protein id | gnl|cribi|Naga_100002g92.4797 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:482859..484394 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=mRNA|length=1092bp ATGTTGCCACGCACAAGGCTGGCGCTGATATCAGCGTTGCTGGGCATCAT AGTGCATCCCTTTCCCGGAGAAGCAGCGAATCCCAAGCTCCCCCACACGC ATAGAGGCATGCTCGAGAAATATGAGCTTAAGGTGCCAAGACTGGCGCTA GACATGGCGGCTGTCGAGCGCCTCGAAAGGGGATACCCGGTCAAAAAGCA GATTCAAGCAGCAGGGCGGGCGGGAGGGAGAGGCATTGTGGTCCAGGACG TGCATGCCCCGGCCTCAGTGGTAATGGGCCGTATTTTAGACTTCGATAAT TATAACAAGATGGTACCCAACGTGGCGCAGTGTGGAAATTACGCTAAGCG CAAGCTAATGCACGGGGACGTGGAGCTAAGGACACGCTACGTCCTCTCCA TCGTCGGGTTCAAGCTCGAGTACTTCGTGAGGCACCTCTACCGGCCCTCC ATACGCACGCTGACATGGACCCTGGACTATGACAGACAGTCAGACCTGGA AGACACGGCGGGTTACTGGTCCGTGGTGCCGCTGGACAAGGAAGGGAATG CGAGGGACTGGTCCCGTGTCTTCTACTCCGTCGACCTCCGCATCCCCGCC TGGGTGCCCCAGCTGGTGGTGAACATCCTCAACACGCAGGCGCTCACGAC TGCGACTGCTTGGGTCAAAACACAGAGTGAGAGGGCGTACCAGACGACGC CGACGTCTGGGAAAAGAAGGCGACCCGATGCCCGGGCTTCAGGACGGACG GGCTCCTCGAGCCTGGCCGACGAGATTGCCAAGTCGGCAGCTGAGTCGAG GAGTAATATTTACGGAGGGGGAGACTTGTGGGAAGAATTTGTGCAAGAAT TTTCCGACATAATTGACACTGCAAAGTACGCCAGTCAAGTTAAGGAGCGG ATGCAAAAACGGGAAGAGAGGGCGAAGAGCGCCAGGCGGAAGAAAGGAGA GACGGAAGCAGGGGCGGGCCCTAACGATTCGCGAAACATCCTTCGTGTTT TGTGGATGACCATATTATTTTACAGTATCACCCAATTATGGATTACGAAG GCAGAGCGCCGAGTTGTGAAGGGCTCTGGTATTGGAAAATAA back to topprotein sequence of rna1927 >rna1927-protein ID=rna1927-protein|Name=rna1927|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp MTFWKFTSRLHAAQIILLPEHFGGRVSVSARSYAAAPLALVKELRSASGA PITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNNRAANEGLVGIAVE GQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSV LADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPG AKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVV AAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFL GEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEGL GGEMPAEGLK back to topmRNA from alignment at CM002458.1:482859..484394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=mRNA|length=1536bp|location=Sequence derived from alignment at CM002458.1:482859..484394+ (Nannochloropsis gaditana) CCGCGCATCCTCGCCTCAGGAGTAGCTATAAGTACTATGCACACATTCCC
CAAACAACGGgttttttttaaatggaTTTGGTTACATACATGGGTTTCAC
TATTTAGAAATTGATTATTTGCTGGTCTTACAAGGCAGGGGCCCGCGAAT
GCCCCAGGCAAGTTCAGCACGCTTATGGTCTATGCAACCCTTTCATTCCA
CACGCAGGCCGCCAGGGCACCATGACATTCTGGAAGTTTACTTCCCGACT
ACATGCTGCACAAATAATTCTTTTACCGGAACATTTTGGCGGAAGAGTAA
GTGTAAGTGCTCGCTCGTATGCCGCTGCTCCGCTGGCATTGGTCAAGGAG
CTTCGGAGTGCTTCTGGTGCTCCTATCACGGACTGCAaaaaggccttgga
ggccgagGGCGTGGATGGAGACATAGCCAAAGCATTTGAATGGCTTCGAA
AAAAGGGCCAGGCGACTGTTATGAAGAACAATAGGGCAGCAAATGAAGGA
CTGGTCGGCATCGCAGTAGAGGGCCAGGCTGGCGTAATAGTGGAGGTGAA
CAGTGAGACAGATTTCGTGGCGAGGAACGCAGATTTTCAGGCCTTCGTGA
AGGACCTTGCGGGAGCAATCCTTCGGATGCCGCCAACCGTCGGCATGGAT
GGTGGGCCGGCTCCATCTGTTCTCGCAGACAAACTGGACATTCCCAGGCT
TCTCGGACAgggtgcgggaggaaggggattcCCTCTCAGTCAAGATTTGA
AAGATCTAGTGGCTAAGATTCGAGAAAACATTTCTGTGAGACGGATAGCG
CGactggccctccctcctggggCCAAGGGCTTTGTGGGCAGTTACGTGCA
CAACGCCTTGAATCCGTCAAtgggcgcggcggcgggatTGGTGGCAGTCC
AGTGCGATAAGCTGCCCTCCCAGATGCCTGCATTGGACTCATTTGGAAAG
CGTCTGGCGATGCATGTTGTCGCAGCCAagccccgcttcctctctcctgc
aTCAGTTCCGCCCTCAGTCCTGGAATACGAGCGGGAGCTCATCCAGGCTC
AGGCGGCGGGCTCCCAGAAACCCCCTGCCATCGTGGCCAAGATgacagag
gggaggctgCGGAAATTTCTGGGTGAGATCTCGCTTTTAGAACAGCCTCA
TATGATTGAGGAAGGAAATCCCACCGTCGCAGAAGTGGCTGCGCgcctgg
ggaaggaggccgggTGCGTTGTCGATGTGGTTGGCTTTGTTCGATACAAG
TGTGGGGAAGTggaagggctgggaggggagatgccAGCGGAGGGACTAAA
GTAACTCATTCCGGAGATCTTTATGAGAGGACGCTGCACTCATGATACGC
GTTTTGTACTTTTCTTTGAAGATACCGCAGTTGCCTGTGTCGGAAGCACG
AGCAGGAGAAGATCAGAGCACTAGACACGAGTCCCTTCAGGCCGCTAATT
ATCCTGAATTTGACTCCATGGTTGGCTTTTGGATGATGCTGTGAAAGGGG
TAGACGATAGATTGTCTAACGAGAATGCCCATCATC back to topCoding sequence (CDS) from alignment at CM002458.1:482859..484394+ >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=CDS|length=1083bp|location=Sequence derived from alignment at CM002458.1:482859..484394+ (Nannochloropsis gaditana) ATGACATTCTGGAAGTTTACTTCCCGACTACATGCTGCACAAATAATTCT TTTACCGGAACATTTTGGCGGAAGAGTAAGTGTAAGTGCTCGCTCGTATG CCGCTGCTCCGCTGGCATTGGTCAAGGAGCTTCGGAGTGCTTCTGGTGCT CCTATCACGGACTGCAaaaaggccttggaggccgagGGCGTGGATGGAGA CATAGCCAAAGCATTTGAATGGCTTCGAAAAAAGGGCCAGGCGACTGTTA TGAAGAACAATAGGGCAGCAAATGAAGGACTGGTCGGCATCGCAGTAGAG GGCCAGGCTGGCGTAATAGTGGAGGTGAACAGTGAGACAGATTTCGTGGC GAGGAACGCAGATTTTCAGGCCTTCGTGAAGGACCTTGCGGGAGCAATCC TTCGGATGCCGCCAACCGTCGGCATGGATGGTGGGCCGGCTCCATCTGTT CTCGCAGACAAACTGGACATTCCCAGGCTTCTCGGACAgggtgcgggagg aaggggattcCCTCTCAGTCAAGATTTGAAAGATCTAGTGGCTAAGATTC GAGAAAACATTTCTGTGAGACGGATAGCGCGactggccctccctcctggg gCCAAGGGCTTTGTGGGCAGTTACGTGCACAACGCCTTGAATCCGTCAAt gggcgcggcggcgggatTGGTGGCAGTCCAGTGCGATAAGCTGCCCTCCC AGATGCCTGCATTGGACTCATTTGGAAAGCGTCTGGCGATGCATGTTGTC GCAGCCAagccccgcttcctctctcctgcaTCAGTTCCGCCCTCAGTCCT GGAATACGAGCGGGAGCTCATCCAGGCTCAGGCGGCGGGCTCCCAGAAAC CCCCTGCCATCGTGGCCAAGATgacagaggggaggctgCGGAAATTTCTG GGTGAGATCTCGCTTTTAGAACAGCCTCATATGATTGAGGAAGGAAATCC CACCGTCGCAGAAGTGGCTGCGCgcctggggaaggaggccgggTGCGTTG TCGATGTGGTTGGCTTTGTTCGATACAAGTGTGGGGAAGTggaagggctg ggaggggagatgccAGCGGAGGGACTAAAGTAA back to top
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