EWM28678.1, cds1922 (CDS) Nannochloropsis gaditana

Overview
NameEWM28678.1
Unique Namecds1922
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:483080..484162 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28678.1
Productelongation factor ts
Orig transcript idgnl|cribi|Naga_100002g92.4797.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:483080..484162 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0005515protein binding
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like
IPR018101Transl_elong_Ts_CS
IPR001816Transl_elong_EFTs/EF1B
IPR014039Transl_elong_EFTs/EF1B_dimer
Homology
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|585111101|gb|EWM28678.1| (elongation factor ts [Nannochloropsis gaditana])

HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
Query:    1 MTFWKFTSRLHAAQIILLPEHFGGRVSVSARSYAAAPLALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEGLGGEMPAEGLK 360
            MTFWKFTSRLHAAQIILLPEHFGGRVSVSARSYAAAPLALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEGLGGEMPAEGLK
Sbjct:    1 MTFWKFTSRLHAAQIILLPEHFGGRVSVSARSYAAAPLALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEGLGGEMPAEGLK 360          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|298708272|emb|CBJ48335.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 249.21 bits (635), Expect = 1.440e-76
Identity = 155/320 (48.44%), Postives = 198/320 (61.88%), Query Frame = 0
Query:   38 LALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKG--QATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKD-LAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALN-PSMGAAAGLVAVQCDKL-----PSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVE 348
            +AL+KELR ASGAP+ DCK AL AEGV+GDIA+AF+WLRK+G  +AT M + R+ANEGL+G+ V+G  G +VEVNSETDFVARNA FQ FVK  L  A+ +     G    PA    + +LD+  LL +   G G  L+  L  LV  IRENI++ R   ++L    KG V  YVH A   P MG  A LVA++ D        +    LD+  K LAMHVVAA+P FL  +S P + LE E++L+  QA  S K P ++ KM EGRLRK+L   +L  Q HM+ EGNP VA+    LG+E G  V + GF R   GE E
Sbjct:   45 MALIKELREASGAPVVDCKNALAAEGVNGDIAQAFQWLRKRGIAKATSMAD-RSANEGLIGLRVDGPHGALVEVNSETDFVARNAKFQEFVKKALDVALEKAKAAAGGTEVPA----SRELDVSELLREDHPGSGELLADTLAQLVGAIRENITISRAHVVSLGGDGKGVVAGYVHGATGLPGMGKNAALVALKLDTTAAGEDTATTETLDASAKSLAMHVVAARPAFLDESSAPEAALEKEKKLLLEQAEESGKDPKVLGKMVEGRLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAVGERE 359          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|1214712648|gb|OWZ23578.1| (Elongation factor Ts [Phytophthora megakarya])

HSP 1 Score: 213.386 bits (542), Expect = 4.744e-63
Identity = 135/315 (42.86%), Postives = 174/315 (55.24%), Query Frame = 0
Query:   41 VKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKN-NRAANEGLVGIAV--EGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPS------QMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            VK+LR+ S AP+ D + AL A   +GD   AFEWLRKKG A+  K   RA  EGLVG+ V   G    +VEVNSETDFVA N  FQA V  +AGA+     +  +   P   +   ++D            G  +++ + +LV  + EN+   R  +  L  G    + SY+HN   P +G A  LVA+Q    PS      Q+  +   G RLAMHVVAAKPRFLS  +VP +++E ER  +  Q   S KP  IVAKMTEGRL KF GE +LLEQ H IEEGNP V    A   K+ G  V V  + R++ GE
Sbjct:   29 VKKLRAESQAPLKDVRNALAA--TEGDFPAAFEWLRKKGIASASKKAGRATAEGLVGVKVADSGLNAAMVEVNSETDFVAMNDKFQALVSSVAGALADTQASDVVTQLPTDQLALVQVD------------GASVAEKVPELVGVVGENVVANRAVQFQLEEGT---ICSYLHNVAAPGLGRAGALVALQ---FPSKTASAEQVAGVKELGHRLAMHVVAAKPRFLSRETVPEALVEKERAFLADQVKDSGKPAHIVAKMTEGRLNKFFGEFTLLEQDHFIEEGNPKVGAFVAEQAKKLGMDVSVAAYERFEVGE 323          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|675212349|ref|XP_008915059.1| (translation elongation factor Ts [Phytophthora parasitica INRA-310] >gi|567974961|gb|ETL25535.1| translation elongation factor Ts [Phytophthora parasitica] >gi|568004425|gb|ETL78749.1| translation elongation factor Ts [Phytophthora parasitica] >gi|568084759|gb|ETM99681.1| translation elongation factor Ts [Phytophthora parasitica INRA-310] >gi|570936271|gb|ETP01528.1| translation elongation factor Ts [Phytophthora parasitica CJ01A1] >gi|570966578|gb|ETP29697.1| translation elongation factor Ts [Phytophthora parasitica P10297] >gi|970665689|gb|KUG02279.1| Elongation factor Ts [Phytophthora nicotianae])

HSP 1 Score: 213.001 bits (541), Expect = 5.884e-63
Identity = 135/315 (42.86%), Postives = 175/315 (55.56%), Query Frame = 0
Query:   41 VKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKN-NRAANEGLVGIAV--EGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPS------QMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            VK+LR+ S AP+ D + AL A   +GD   AFEWLRKKG A+  K   R   EGLV + V   G A  +VEVNSETDFVA N  FQA V  +AGA+   P +  +   P      DKL +  +        G  +++ + +LV  + EN+   R  +  L  G    + SY+HN   P +G A  LVA+Q    PS      Q+  +   G RLAMH+VAAKPRFLS  +VP +++E ER  +  Q   S KP  I+AKMTEGRL KF GE +LLEQ H IEEGNP V    A   K+ G  V V  + R++ GE
Sbjct:   31 VKKLRAESQAPLKDVRNALAA--TEGDFPAAFEWLRKKGIASASKKAGRQTGEGLVAVKVADSGLAAAMVEVNSETDFVAMNDKFQALVSSVAGALAEAPASEVVTQLPT-----DKLALVEV-------DGATVAEKVPELVGVVGENVVANRAVQFQLEEGT---ICSYLHNVAAPGLGRAGALVALQ---FPSKTASAEQVAGVKELGHRLAMHIVAAKPRFLSRETVPEALVEKERVFLADQVKDSGKPAHIIAKMTEGRLNKFFGEFTLLEQDHFIEEGNPKVGVFVAEQAKKLGVDVSVAAYERFEVGE 325          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|325188666|emb|CCA23197.1| (elongation factor Ts putative [Albugo laibachii Nc14])

HSP 1 Score: 213.386 bits (542), Expect = 8.018e-63
Identity = 126/326 (38.65%), Postives = 187/326 (57.36%), Query Frame = 0
Query:   27 SVSARSYAAAPLALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKG-QATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKL--PSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEG 349
            S +  S     L +VK+LR+A+ AP  D K AL A    GD   AFEWLRKKG  A   K++R+A EGLVGI V+     +V+VNSETDFVARN  FQ FV  +A   L +  +  +       +  D+L    L      GR   L+Q + +LVAK+ ENI ++R  ++ +    +G + SY+HN++   +G    LVA+   K     +   +   G++LAMH+ AAKP++L+  S+P   +E ER L+  Q   + K P+I+ K+ +G+L K+  E++L+EQ H++ EGNP V +V   L  + G  VD+VGF R++ GE  G
Sbjct:   22 STTVSSLFKPDLIMVKKLRNATDAPFKDIKSALAAS--RGDYDGAFEWLRKKGIAAATAKSSRSALEGLVGIIVDKNTASMVQVNSETDFVARNEKFQTFVVSIA---LSVQSSSQLKENCDELLAKDEL--LALTVDNENGRSGQLAQIIPELVAKVGENIVIQRACKVRVD---EGIIASYLHNSIGKHLGRIGALVAISFPKTIDAKKQELIKKAGQQLAMHIAAAKPKYLNSNSIPCDTIENERRLLSEQVQQTGKLPSIIEKIIQGKLEKYYSEVTLVEQNHLVHEGNPKVRKVLEILSNDVGAPVDIVGFQRFEVGEDAG 337          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|301094764|ref|XP_002896486.1| (elongation factor Ts, putative [Phytophthora infestans T30-4] >gi|262109461|gb|EEY67513.1| elongation factor Ts, putative [Phytophthora infestans T30-4])

HSP 1 Score: 211.846 bits (538), Expect = 1.995e-62
Identity = 135/315 (42.86%), Postives = 175/315 (55.56%), Query Frame = 0
Query:   41 VKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNN-RAANEGLVGIAV--EGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPS------QMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            VK+LR+ S AP+ D + AL A   +GD   AFEWLRKKG A+  K + R   EGLV + V   G A  +VEVNSETDFVA N  FQA V  +AGA+     +  +   P      DKL +  +        G  +++ + +LV  + EN+   R  +  L  G    + SY+HN   P +G A  LVA+Q    PS      Q+  +   G RLAMH+VAAKPRFLS  +VP +++E ER  +  Q   S KP  IVAKMTEGRL KF GE +LLEQ H IEEGNP V    A   K+ G  V V  + R++ GE
Sbjct:   31 VKKLRAESQAPLKDVRNALAA--TEGDFPAAFEWLRKKGIASASKKSGRQTAEGLVSVKVADSGLAAAMVEVNSETDFVAMNDKFQALVSSVAGALADASASEIVTQLPT-----DKLALVEV-------DGATVAEKVPELVGVVGENVVANRAVQFQLKEGT---ICSYLHNVAAPGLGRAGALVALQ---FPSKSASAEQVAGVKELGHRLAMHIVAAKPRFLSRETVPEALVEKERAFLADQVKDSGKPAHIVAKMTEGRLNKFFGEFTLLEQDHFIEEGNPKVGAFVAEQAKKLGVDVSVAAYERFEVGE 325          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|566008818|gb|ETI31729.1| (translation elongation factor Ts, partial [Phytophthora parasitica P1569] >gi|567946281|gb|ETK72092.1| translation elongation factor Ts, partial [Phytophthora parasitica] >gi|568034349|gb|ETM32022.1| translation elongation factor Ts, partial [Phytophthora parasitica] >gi|570312492|gb|ETO60440.1| translation elongation factor Ts, partial [Phytophthora parasitica P1976])

HSP 1 Score: 212.616 bits (540), Expect = 2.617e-62
Identity = 135/315 (42.86%), Postives = 175/315 (55.56%), Query Frame = 0
Query:   41 VKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKN-NRAANEGLVGIAV--EGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPS------QMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            VK+LR+ S AP+ D + AL A   +GD   AFEWLRKKG A+  K   R   EGLV + V   G A  +VEVNSETDFVA N  FQA V  +AGA+   P +  +   P      DKL +  +        G  +++ + +LV  + EN+   R  +  L  G    + SY+HN   P +G A  LVA+Q    PS      Q+  +   G RLAMH+VAAKPRFLS  +VP +++E ER  +  Q   S KP  I+AKMTEGRL KF GE +LLEQ H IEEGNP V    A   K+ G  V V  + R++ GE
Sbjct:   67 VKKLRAESQAPLKDVRNALAA--TEGDFPAAFEWLRKKGIASASKKAGRQTGEGLVAVKVADSGLAAAMVEVNSETDFVAMNDKFQALVSSVAGALAEAPASEVVTQLPT-----DKLALVEV-------DGATVAEKVPELVGVVGENVVANRAVQFQLEEGT---ICSYLHNVAAPGLGRAGALVALQ---FPSKTASAEQVAGVKELGHRLAMHIVAAKPRFLSRETVPEALVEKERVFLADQVKDSGKPAHIIAKMTEGRLNKFFGEFTLLEQDHFIEEGNPKVGVFVAEQAKKLGVDVSVAAYERFEVGE 361          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|550978783|ref|WP_022726894.1| (elongation factor Ts [Fodinicurvata sediminis])

HSP 1 Score: 210.305 bits (534), Expect = 4.076e-62
Identity = 131/309 (42.39%), Postives = 178/309 (57.61%), Query Frame = 0
Query:   39 ALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKG-QATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            +LVKELR  +GA + DCKKAL+    +G++ +A +WLRKKG  A   K +R A EGLV IA EGQ G I+EVN+ETDFV+RN  FQA+V  + G  L         GG          DI  L      G G  ++ +L  L+A I EN+S+RR   L++    KG V  Y+H+ +   +G    +VA++ D    ++ AL   GK++AMHV AA P  L    V  +VL+ ERE++  QA  S KP  I+ KM EGRLRKF  E  LLEQ  +I +G   V++V  +  K+ G  V + GFVRY+ GE
Sbjct:    7 SLVKELREKTGAGMMDCKKALKE--TEGNLEEALDWLRKKGLSAAAKKADRTAAEGLVAIATEGQRGAILEVNAETDFVSRNEQFQAYVSKVVGIALEK-------GG----------DIDNLAAADYPGTGRNVADELTQLIATIGENMSLRRSEVLSVD---KGVVSGYIHSQVVEGLGRIGVIVALESDGDAEKLSAL---GKQIAMHVAAANPMALDRDGVDTAVLDREREVLADQARASGKPEDIINKMVEGRLRKFYEESVLLEQTFVI-DGETKVSDVLEQAAKDVGAPVKLTGFVRYQLGE 289          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|1199248646|gb|OUS15011.1| (translation elongation factor Ts [Rhodospirillales bacterium 47_12_T64])

HSP 1 Score: 209.149 bits (531), Expect = 1.073e-61
Identity = 132/309 (42.72%), Postives = 177/309 (57.28%), Query Frame = 0
Query:   39 ALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKG-QATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            ALVK+LR  SGA + DCKKAL     DGD+  A +WLRK G  A   K+ R A+EGLV IA  G  G +VEVNSETDFV+RN  FQ+FV  +A    +   TVG D     S      D P        G    ++  L   +A I EN+S+RR A L +   ++G V +Y+HN   P +G  A LVA++     S+   L++FGK++AMHV AA P+ L   SV  + LE E+E++  QA  S KP  I+ KM  GRLRK+  E+ LLEQ ++I +G  +V +      K+ G  V + GFVRY+ GE
Sbjct:    7 ALVKQLRDQSGAGMMDCKKALTE--TDGDVDAAVDWLRKNGLAAAAKKSGRVASEGLVAIATAGNKGAVVEVNSETDFVSRNEQFQSFVSSVA----QQAMTVGGDIEALASA-----DFP--------GEDGSVADALTKRIATIGENMSLRRTASLEV---SEGVVAAYIHNQTAPGLGKIAVLVALESSGDSSK---LEAFGKQVAMHVAAANPQALDRDSVDVTALEREKEVLSDQARASGKPEEIIEKMLVGRLRKYYEEVCLLEQGYVI-DGENSVGKAVELFAKDLGAPVKLTGFVRYQLGE 289          
BLAST of EWM28678.1 vs. NCBI_GenBank
Match: gi|1088438167|gb|OHC75263.1| (translation elongation factor Ts [Rhodospirillales bacterium RIFCSPLOWO2_02_FULL_58_16] >gi|1088441032|gb|OHC77970.1| translation elongation factor Ts [Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28])

HSP 1 Score: 208.764 bits (530), Expect = 1.360e-61
Identity = 128/309 (41.42%), Postives = 175/309 (56.63%), Query Frame = 0
Query:   39 ALVKELRSASGAPITDCKKALEAEGVDGDIAKAFEWLRKKG-QATVMKNNRAANEGLVGIAVEGQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSVLADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPGAKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVVAAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFLGEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGE 346
            +LVKELR  +GA + DCKKAL      G++ +A +WLRKKG  A   K  R A+EGLVG+A  G AG ++EVN+ETDFVARN  FQ FV+ LAG        + ++ G          D+  L G      G  + + L  L+A I EN+S+RR   L +  G    VGSY+HNAL P +G    LVA+      +    LD+ G++LAMHV AA P  +S   + P+ LE E+ ++  QA  S KP  I+ KM EGRLRK+  E+ L++Q ++I +G   V +      K+ G  V V GFVR+  GE
Sbjct:    7 SLVKELREKTGAGMMDCKKALTE--TSGNMEEAVDWLRKKGLSAAAKKAGRVASEGLVGVAANGNAGAVIEVNAETDFVARNDRFQEFVRTLAG--------LALENGS---------DLEALKGVAYLNTGRNVEEQLTYLIATIGENMSIRRAEVLRVDSG---VVGSYIHNALAPGLGKIGVLVAIDS---RADAAGLDALGRQLAMHVAAANPHAVSRNELDPADLEREKNILSDQARASGKPEDIIGKMVEGRLRKYYEEVCLVDQVYVI-DGETRVGKAIEAAAKDVGAPVAVKGFVRFSLGE 289          
The following BLAST results are available for this feature:
BLAST of EWM28678.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111101|gb|EWM28678.1|0.000e+0100.00elongation factor ts [Nannochloropsis gaditana][more]
gi|298708272|emb|CBJ48335.1|1.440e-7648.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214712648|gb|OWZ23578.1|4.744e-6342.86Elongation factor Ts [Phytophthora megakarya][more]
gi|675212349|ref|XP_008915059.1|5.884e-6342.86translation elongation factor Ts [Phytophthora par... [more]
gi|325188666|emb|CCA23197.1|8.018e-6338.65elongation factor Ts putative [Albugo laibachii Nc... [more]
gi|301094764|ref|XP_002896486.1|1.995e-6242.86elongation factor Ts, putative [Phytophthora infes... [more]
gi|566008818|gb|ETI31729.1|2.617e-6242.86translation elongation factor Ts, partial [Phytoph... [more]
gi|550978783|ref|WP_022726894.1|4.076e-6242.39elongation factor Ts [Fodinicurvata sediminis][more]
gi|1199248646|gb|OUS15011.1|1.073e-6142.72translation elongation factor Ts [Rhodospirillales... [more]
gi|1088438167|gb|OHC75263.1|1.360e-6141.42translation elongation factor Ts [Rhodospirillales... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1927rna1927Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications