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Properties
| Property Name | Value |
|---|
| Product | elongation factor ts |
| Orig transcript id | gnl|cribi|Naga_100002g92.4797.mrna |
| Orig protein id | gnl|cribi|Naga_100002g92.4797 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:482859..484394 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=mRNA|length=1092bp
ATGTTGCCACGCACAAGGCTGGCGCTGATATCAGCGTTGCTGGGCATCAT
AGTGCATCCCTTTCCCGGAGAAGCAGCGAATCCCAAGCTCCCCCACACGC
ATAGAGGCATGCTCGAGAAATATGAGCTTAAGGTGCCAAGACTGGCGCTA
GACATGGCGGCTGTCGAGCGCCTCGAAAGGGGATACCCGGTCAAAAAGCA
GATTCAAGCAGCAGGGCGGGCGGGAGGGAGAGGCATTGTGGTCCAGGACG
TGCATGCCCCGGCCTCAGTGGTAATGGGCCGTATTTTAGACTTCGATAAT
TATAACAAGATGGTACCCAACGTGGCGCAGTGTGGAAATTACGCTAAGCG
CAAGCTAATGCACGGGGACGTGGAGCTAAGGACACGCTACGTCCTCTCCA
TCGTCGGGTTCAAGCTCGAGTACTTCGTGAGGCACCTCTACCGGCCCTCC
ATACGCACGCTGACATGGACCCTGGACTATGACAGACAGTCAGACCTGGA
AGACACGGCGGGTTACTGGTCCGTGGTGCCGCTGGACAAGGAAGGGAATG
CGAGGGACTGGTCCCGTGTCTTCTACTCCGTCGACCTCCGCATCCCCGCC
TGGGTGCCCCAGCTGGTGGTGAACATCCTCAACACGCAGGCGCTCACGAC
TGCGACTGCTTGGGTCAAAACACAGAGTGAGAGGGCGTACCAGACGACGC
CGACGTCTGGGAAAAGAAGGCGACCCGATGCCCGGGCTTCAGGACGGACG
GGCTCCTCGAGCCTGGCCGACGAGATTGCCAAGTCGGCAGCTGAGTCGAG
GAGTAATATTTACGGAGGGGGAGACTTGTGGGAAGAATTTGTGCAAGAAT
TTTCCGACATAATTGACACTGCAAAGTACGCCAGTCAAGTTAAGGAGCGG
ATGCAAAAACGGGAAGAGAGGGCGAAGAGCGCCAGGCGGAAGAAAGGAGA
GACGGAAGCAGGGGCGGGCCCTAACGATTCGCGAAACATCCTTCGTGTTT
TGTGGATGACCATATTATTTTACAGTATCACCCAATTATGGATTACGAAG
GCAGAGCGCCGAGTTGTGAAGGGCTCTGGTATTGGAAAATAA back to topprotein sequence of rna1927 >rna1927-protein ID=rna1927-protein|Name=rna1927|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MTFWKFTSRLHAAQIILLPEHFGGRVSVSARSYAAAPLALVKELRSASGA
PITDCKKALEAEGVDGDIAKAFEWLRKKGQATVMKNNRAANEGLVGIAVE
GQAGVIVEVNSETDFVARNADFQAFVKDLAGAILRMPPTVGMDGGPAPSV
LADKLDIPRLLGQGAGGRGFPLSQDLKDLVAKIRENISVRRIARLALPPG
AKGFVGSYVHNALNPSMGAAAGLVAVQCDKLPSQMPALDSFGKRLAMHVV
AAKPRFLSPASVPPSVLEYERELIQAQAAGSQKPPAIVAKMTEGRLRKFL
GEISLLEQPHMIEEGNPTVAEVAARLGKEAGCVVDVVGFVRYKCGEVEGL
GGEMPAEGLK back to topmRNA from alignment at CM002458.1:482859..484394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=mRNA|length=1536bp|location=Sequence derived from alignment at CM002458.1:482859..484394+ (Nannochloropsis gaditana)
CCGCGCATCCTCGCCTCAGGAGTAGCTATAAGTACTATGCACACATTCCC
CAAACAACGGgttttttttaaatggaTTTGGTTACATACATGGGTTTCAC
TATTTAGAAATTGATTATTTGCTGGTCTTACAAGGCAGGGGCCCGCGAAT
GCCCCAGGCAAGTTCAGCACGCTTATGGTCTATGCAACCCTTTCATTCCA
CACGCAGGCCGCCAGGGCACCATGACATTCTGGAAGTTTACTTCCCGACT
ACATGCTGCACAAATAATTCTTTTACCGGAACATTTTGGCGGAAGAGTAA
GTGTAAGTGCTCGCTCGTATGCCGCTGCTCCGCTGGCATTGGTCAAGGAG
CTTCGGAGTGCTTCTGGTGCTCCTATCACGGACTGCAaaaaggccttgga
ggccgagGGCGTGGATGGAGACATAGCCAAAGCATTTGAATGGCTTCGAA
AAAAGGGCCAGGCGACTGTTATGAAGAACAATAGGGCAGCAAATGAAGGA
CTGGTCGGCATCGCAGTAGAGGGCCAGGCTGGCGTAATAGTGGAGGTGAA
CAGTGAGACAGATTTCGTGGCGAGGAACGCAGATTTTCAGGCCTTCGTGA
AGGACCTTGCGGGAGCAATCCTTCGGATGCCGCCAACCGTCGGCATGGAT
GGTGGGCCGGCTCCATCTGTTCTCGCAGACAAACTGGACATTCCCAGGCT
TCTCGGACAgggtgcgggaggaaggggattcCCTCTCAGTCAAGATTTGA
AAGATCTAGTGGCTAAGATTCGAGAAAACATTTCTGTGAGACGGATAGCG
CGactggccctccctcctggggCCAAGGGCTTTGTGGGCAGTTACGTGCA
CAACGCCTTGAATCCGTCAAtgggcgcggcggcgggatTGGTGGCAGTCC
AGTGCGATAAGCTGCCCTCCCAGATGCCTGCATTGGACTCATTTGGAAAG
CGTCTGGCGATGCATGTTGTCGCAGCCAagccccgcttcctctctcctgc
aTCAGTTCCGCCCTCAGTCCTGGAATACGAGCGGGAGCTCATCCAGGCTC
AGGCGGCGGGCTCCCAGAAACCCCCTGCCATCGTGGCCAAGATgacagag
gggaggctgCGGAAATTTCTGGGTGAGATCTCGCTTTTAGAACAGCCTCA
TATGATTGAGGAAGGAAATCCCACCGTCGCAGAAGTGGCTGCGCgcctgg
ggaaggaggccgggTGCGTTGTCGATGTGGTTGGCTTTGTTCGATACAAG
TGTGGGGAAGTggaagggctgggaggggagatgccAGCGGAGGGACTAAA
GTAACTCATTCCGGAGATCTTTATGAGAGGACGCTGCACTCATGATACGC
GTTTTGTACTTTTCTTTGAAGATACCGCAGTTGCCTGTGTCGGAAGCACG
AGCAGGAGAAGATCAGAGCACTAGACACGAGTCCCTTCAGGCCGCTAATT
ATCCTGAATTTGACTCCATGGTTGGCTTTTGGATGATGCTGTGAAAGGGG
TAGACGATAGATTGTCTAACGAGAATGCCCATCATC back to topCoding sequence (CDS) from alignment at CM002458.1:482859..484394+ >rna1927 ID=rna1927|Name=rna1927|organism=Nannochloropsis gaditana|type=CDS|length=1083bp|location=Sequence derived from alignment at CM002458.1:482859..484394+ (Nannochloropsis gaditana)
ATGACATTCTGGAAGTTTACTTCCCGACTACATGCTGCACAAATAATTCT
TTTACCGGAACATTTTGGCGGAAGAGTAAGTGTAAGTGCTCGCTCGTATG
CCGCTGCTCCGCTGGCATTGGTCAAGGAGCTTCGGAGTGCTTCTGGTGCT
CCTATCACGGACTGCAaaaaggccttggaggccgagGGCGTGGATGGAGA
CATAGCCAAAGCATTTGAATGGCTTCGAAAAAAGGGCCAGGCGACTGTTA
TGAAGAACAATAGGGCAGCAAATGAAGGACTGGTCGGCATCGCAGTAGAG
GGCCAGGCTGGCGTAATAGTGGAGGTGAACAGTGAGACAGATTTCGTGGC
GAGGAACGCAGATTTTCAGGCCTTCGTGAAGGACCTTGCGGGAGCAATCC
TTCGGATGCCGCCAACCGTCGGCATGGATGGTGGGCCGGCTCCATCTGTT
CTCGCAGACAAACTGGACATTCCCAGGCTTCTCGGACAgggtgcgggagg
aaggggattcCCTCTCAGTCAAGATTTGAAAGATCTAGTGGCTAAGATTC
GAGAAAACATTTCTGTGAGACGGATAGCGCGactggccctccctcctggg
gCCAAGGGCTTTGTGGGCAGTTACGTGCACAACGCCTTGAATCCGTCAAt
gggcgcggcggcgggatTGGTGGCAGTCCAGTGCGATAAGCTGCCCTCCC
AGATGCCTGCATTGGACTCATTTGGAAAGCGTCTGGCGATGCATGTTGTC
GCAGCCAagccccgcttcctctctcctgcaTCAGTTCCGCCCTCAGTCCT
GGAATACGAGCGGGAGCTCATCCAGGCTCAGGCGGCGGGCTCCCAGAAAC
CCCCTGCCATCGTGGCCAAGATgacagaggggaggctgCGGAAATTTCTG
GGTGAGATCTCGCTTTTAGAACAGCCTCATATGATTGAGGAAGGAAATCC
CACCGTCGCAGAAGTGGCTGCGCgcctggggaaggaggccgggTGCGTTG
TCGATGTGGTTGGCTTTGTTCGATACAAGTGTGGGGAAGTggaagggctg
ggaggggagatgccAGCGGAGGGACTAAAGTAA back to top
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