EWM28687.1, cds1919 (CDS) Nannochloropsis gaditana

Overview
NameEWM28687.1
Unique Namecds1919
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:478568..478663 +
Alignment locationCM002458.1:478713..478903 +
Alignment locationCM002458.1:478949..479097 +
Alignment locationCM002458.1:479225..479268 +

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Properties
Property NameValue
Protein idEWM28687.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100002g95.4806.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:478568..478663 +
CM002458.1supercontigCM002458.1:478713..478903 +
CM002458.1supercontigCM002458.1:478949..479097 +
CM002458.1supercontigCM002458.1:479225..479268 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28687.1 vs. NCBI_GenBank
Match: gi|585111110|gb|EWM28687.1| (hypothetical protein Naga_100002g95 [Nannochloropsis gaditana])

HSP 1 Score: 325.479 bits (833), Expect = 8.958e-113
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MRRTDHGVKGRHACRSQAMKGVSQIRGGAWTTVSLGIEPSEWVRERPSRSLFLIIGSPDNPPSAEALFVCKLERGRRKSKVWQSCRLSSSQESARMCCCIFSLYYSVRANTFTRLFVVREGYGVRAYILSSHKDRGKRTNDSRRCCGLLRSAHVQLSLQ 159
            MRRTDHGVKGRHACRSQAMKGVSQIRGGAWTTVSLGIEPSEWVRERPSRSLFLIIGSPDNPPSAEALFVCKLERGRRKSKVWQSCRLSSSQESARMCCCIFSLYYSVRANTFTRLFVVREGYGVRAYILSSHKDRGKRTNDSRRCCGLLRSAHVQLSLQ
Sbjct:    1 MRRTDHGVKGRHACRSQAMKGVSQIRGGAWTTVSLGIEPSEWVRERPSRSLFLIIGSPDNPPSAEALFVCKLERGRRKSKVWQSCRLSSSQESARMCCCIFSLYYSVRANTFTRLFVVREGYGVRAYILSSHKDRGKRTNDSRRCCGLLRSAHVQLSLQ 159
The following BLAST results are available for this feature:
BLAST of EWM28687.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111110|gb|EWM28687.1|8.958e-113100.00hypothetical protein Naga_100002g95 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1924rna1924Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications