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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g95.4806.mrna |
| Orig protein id | gnl|cribi|Naga_100002g95.4806 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:478568..479268 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=mRNA|length=1482bp
ATGTTTGACGTAGTATTTCTGTACTTTACTTACCAAGCAAACCTTAATCT
TCACGAACAACTCACACAGATAGTTTTATTCGGGCTTCTTGCTTGCGCGG
CATCTTGTACACGAAGCCAGATTCCTGCTTGCTTTCCAACCAGACACAAC
TACAAGCTACCCCGTTGCACAGGACTAGCAGGGGGCTTTATAATGTTCTG
CTCTACATCCGTCAGCCAGCTGGTGGTAGTTTCGGTCACGCTACTTTTTG
GTTCAACAAATGCGTTCGTCAGCCCGGCAATCTGGTCCCGTATTCAAAGC
AGCCTTCGCCTGCACGGTCAACGTGTCGAAGCAGAACAGCCACCTGTTCT
CGGAAGTGTTGCGAGCACTAGCCCCTTCCGGCGCGCTTTAACGTTCGGAG
AACGTATGACAGCACTGCGAGCCACAGCACCAATGAGCTTTGGTGACTTT
GGTGGACAACAAAATGGAGATGAGCTGAGTTTCGCTGAGGTGCGTGAGCA
GCTTGGGGCCCTCGAGTCGCGTTTGGCGGGCGCCATGGAATTCGGGAGAT
ACGATGAGGCGAAGCAGCTCGTCAACGAGATCACTACTATGAAAGATTTT
TTGGAAAAACAATTAAATGGACGCCAGGTTGGGAGTGATGGTGTACCAAA
CGGGAAAGGCAGCTCTCGAGCCTCTCGCAACCCGTTCTTCGACGCCTTCG
GCTTGGGCGGGGCCTCTCCGATGGCGGCGACCATGATGGCTCCCGTACAG
CCTTCCTCAAGCGCCCCACAACCTCGGCGCAGCAGTCGACCGGGCCTTGG
CGCCTTCGGAAGCGTCGTGGGCTCCCGCCGACGGCCCTCGGGCTCGGCCT
CAAAGAGCTCAGGCGGGCTGGTGAATGGTCCCCGGGAGGGCTGGGTGGGG
AAAGGCAAGTCAGGCGATCTTCCCATGGAAGCCGTCAGAAAGCGTCACTC
CGACATCACGGCCTATGGCATTCGCGTGGAGGTATTTTGCTTCTTCCAGC
CAGGTGCCTCGCGTCCTCAGGACAACCTCTACCAGTTCCAGTGCAACGTC
CGCCTCACCAACACGAACCCGGGGGACGTCCAGCTCCTCTCCCGCGAGCT
CAAGATCTTCAAGGCAGACGGCTCCCCCCCTGAGTACGGCCCAGCCTCGC
AGCAGCTGGAGTCTCAGCCGGTAGTGGGGCCGGGCTCTGTGTACATGTAC
ATGTCCGAGTTCGGAATCACCTGCGTGCCGGAAGACAGGAAGTACCTGGG
CCGAATCGAGGGTCACTTCAACGTGGCCGTGAAGGATGAAAATGCCGTGG
TGAAGGTTCCCATCGCACCATTTTGGCTGGAGCTGCCGGGCGACACCTTG
GCGGGAGAGCTGGAAAAGCGCGGTTTCAGGATTTGGTATACACACCTTGA
GTTGGGATCGAGTGCACACGCAGGGATAAAAAAGGGGATACGAGCGTTGG
AAAAAGGGATCATGAAGGGCTCAACTACGTAA back to topprotein sequence of rna1924 >rna1924-protein ID=rna1924-protein|Name=rna1924|organism=Nannochloropsis gaditana|type=polypeptide|length=159bp
MRRTDHGVKGRHACRSQAMKGVSQIRGGAWTTVSLGIEPSEWVRERPSRS
LFLIIGSPDNPPSAEALFVCKLERGRRKSKVWQSCRLSSSQESARMCCCI
FSLYYSVRANTFTRLFVVREGYGVRAYILSSHKDRGKRTNDSRRCCGLLR
SAHVQLSLQ back to topmRNA from alignment at CM002458.1:478568..479268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=mRNA|length=701bp|location=Sequence derived from alignment at CM002458.1:478568..479268+ (Nannochloropsis gaditana)
atgaggaggacggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCA
AGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCC
TCAGTGACGCGCTTGGACGGTAGTCTTGGTCGAGGATCGTTTCAGGTCAG
TTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGTC
TCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCTG
TTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAATC
GTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTAGTTTTAGTGGG
ATGGTTGGCTATTTGTTGAGTGGAAACTCAGGTGCTGTTGCATTTTTTCC
TTATACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAG
AGAAGGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAGATCGCG
GTAAAAGAACAAACGACTCTAGAAGATGCTGTCGATTTTGCAGATTTTTC
ATGGATAAGCTCGTGTGGCTCAGGATTTTCCAAGGCTTCTTGGCAATCTT
TACTTCAGGCAAGTCTCGTCCTGCGAAGCACATCTTTCGGTGCCCAACTC
AAAGCAGGTGGCTTGCTTCGATCGGCTCATGTTCAGCTCTCCTTGCAATG
A back to topCoding sequence (CDS) from alignment at CM002458.1:478568..479268+ >rna1924 ID=rna1924|Name=rna1924|organism=Nannochloropsis gaditana|type=CDS|length=1920bp|location=Sequence derived from alignment at CM002458.1:478568..479268+ (Nannochloropsis gaditana)
atgaggaggacggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCA
AGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCA
GTTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGT
CTCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCT
GTTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAAT
CGTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTGCTGTTGCATT
TTTTCCTTATACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGT
CGTGAGAGAAGGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAG
ATCGCGGTAAAAGAACAAACGACTCTAGAAGATGCTGTGGCTTGCTTCGA
TCGGCTCATGTTCAGCTCTCCTTGCAATGAatgaggaggacggaccACGG
GGTAAAGGGAAGACACGCTTGTAGATCGCAAGCGATGAAAGGAGTGAGCC
AAATCAGGGGGGGCGCGTGGACGACGGTCAGTTTAGGAATCGAGCCATCA
GAATGGGTACGTGAAAGGCCTTCTCGAAGTCTCTTCTTAATAATTGGATC
GCCTGATAACCCGCCTTCCGCGGAGGCGCTGTTTGTATGTAAGCTAGAGA
GAGGCCGACGGAAGTCGAAGGTGTGGCAATCGTGTCGTTTGTCCTCCAGC
CAGGAAAGCGCGAGGATGTGCTGTTGCATTTTTTCCTTATACTATTCTGT
GCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAGAGAAGGTTATGGTG
TAAGGGCCTATATACTCAGTTCACATAAAGATCGCGGTAAAAGAACAAAC
GACTCTAGAAGATGCTGTGGCTTGCTTCGATCGGCTCATGTTCAGCTCTC
CTTGCAATGAatgaggaggacggaccACGGGGTAAAGGGAAGACACGCTT
GTAGATCGCAAGCGATGAAAGGAGTGAGCCAAATCAGGGGGGGCGCGTGG
ACGACGGTCAGTTTAGGAATCGAGCCATCAGAATGGGTACGTGAAAGGCC
TTCTCGAAGTCTCTTCTTAATAATTGGATCGCCTGATAACCCGCCTTCCG
CGGAGGCGCTGTTTGTATGTAAGCTAGAGAGAGGCCGACGGAAGTCGAAG
GTGTGGCAATCGTGTCGTTTGTCCTCCAGCCAGGAAAGCGCGAGGATGTG
CTGTTGCATTTTTTCCTTATACTATTCTGTGCGGGCCAATACTTTCACGA
GGCTCTTCGTCGTGAGAGAAGGTTATGGTGTAAGGGCCTATATACTCAGT
TCACATAAAGATCGCGGTAAAAGAACAAACGACTCTAGAAGATGCTGTGG
CTTGCTTCGATCGGCTCATGTTCAGCTCTCCTTGCAATGAatgaggagga
cggaccACGGGGTAAAGGGAAGACACGCTTGTAGATCGCAAGCGATGAAA
GGAGTGAGCCAAATCAGGGGGGGCGCGTGGACGACGGTCAGTTTAGGAAT
CGAGCCATCAGAATGGGTACGTGAAAGGCCTTCTCGAAGTCTCTTCTTAA
TAATTGGATCGCCTGATAACCCGCCTTCCGCGGAGGCGCTGTTTGTATGT
AAGCTAGAGAGAGGCCGACGGAAGTCGAAGGTGTGGCAATCGTGTCGTTT
GTCCTCCAGCCAGGAAAGCGCGAGGATGTGCTGTTGCATTTTTTCCTTAT
ACTATTCTGTGCGGGCCAATACTTTCACGAGGCTCTTCGTCGTGAGAGAA
GGTTATGGTGTAAGGGCCTATATACTCAGTTCACATAAAGATCGCGGTAA
AAGAACAAACGACTCTAGAAGATGCTGTGGCTTGCTTCGATCGGCTCATG
TTCAGCTCTCCTTGCAATGA back to top
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