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Properties
| Property Name | Value |
|---|
| Product | zinc iron permease |
| Orig transcript id | gnl|cribi|Naga_100002g101.4887.mrna |
| Orig protein id | gnl|cribi|Naga_100002g101.4887 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:466160..468320 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1919 ID=rna1919|Name=rna1919|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp
TCAAGCGTTGCGCGTCGCCGTCGGAGCGATTTTTGCATGCAGGCCCGCGG
GGAGGGCAAGAACGAAGCTACGCAAATGTTGTCACAAGGTTTCGGCAAAA
TAAATACTTGGAGAAGATGGGCTACGCATAGTCCCGCAATAGAGATGGGG
CGATAAATGGTTTTACAGTCTGCTATTCTTCACAAGGATATTTTTTGAGC
GCATGCCGCCGGATTTCAGGCCGCGCGTGCGTCGTCTCGCTGCTTCTACA
CTTCCACCTCGCTAGCTGGAGGGACACAAAGTATTTTGAGTGAGACGCAA
CGACGGTGTGATGCCGGTCAACCTCGAACGACCTCTTTTCTGACGCCAAC
TTCTGCTTGAAGAGCTGCTTCTGGAGGTCATGGACTCACCCTTCATTCGG
ACATGCCCCGTGTACCCTCCCCGCCAGATGAGTCACGGAAAGAAGAAGGA
AGCGTATTCAGACCGCGGGTTCGGAACAATAGCTATCCATGCCGGCCAAG
AGCCAGACCCGGGGACAGGAGCTGTAGTACCTGCTATTTCGTTAGCCACG
ACATTTTCGCAAGTTAGCCCAGGCGTGAAGCACGGCACAGATTTGCCCAA
CAGCTTTGGAAAAGGCTTCGAGTATTCCCGCACAGGCAATCCAACAAGAG
GCGCCTTCGAGCGGGCCATGGCTGCGGTGGAGCATGGCCAATTTGCCGTG
TCATTTGCCTCGGGTTTGGCAGCAACTTCCGCCATTGTCCATTTGCTTGA
GACGGGGCAGCATGTGGTCATCGTCGATGACGTGTACGGAGGCACCCAAC
GATACTTTCGTATGGTAGTCAAGCCCACGTACGACATCGATTTCACTTTC
GTGGACTTCAACGACCCCTCAGCGCTTGACGCAGCCTTTCAGCCGGGCAG
GACGAGGCTGGTATGGCTGGAGACTCCGACGAACCCTACCCTGAAGGTGT
CCGATGTGGCGGCCACGGCGGCCCTGGCCAAGAAGCACGGGGCCCTTTTC
GTCGCAGACAACACCTTTCTGTCCCCGTATTTCCAAAACCCCCTCGATCT
GGGGGCCGACATGGTCGTGCACAGCGTCACCAAATATATCGGCGGGCATT
CGGACGTGGTGGGCGGGGTCGTGGTCACCAACCTCCCGGAGGTGCACGAG
AAGCTCCGATTCATCCAGAATTCTGTCGGGGCGGTCCCTTCCCCCTTCGA
TGCGTACATGGCCCTCCGAGGGCTCAAAACCTTGCACGTTCGCATGGAGG
CCGCCGCCCGTAACGCGCTGGCCATCGCCCGGCACTTGGAGCAGCACGCG
GGCGTGGCCAGGGTCCTGTACCCCGGCCTGCCCTCCCATCCCCAGTACGC
GCTCGCCCAGAAGCAGCAGCACGGATCAGGGGCAATGATCACTTTCTATG
TGCGGGGAGCATTACACAACGCGCGCCGTTTTTTGGAGACGCTGCAGGTG
TTCATCCTGGCCGAGAGCCTGGGGGCCGTCGAGTCGCTGGCCGAGTCCCC
GGCCATCATGACCCACGCTTCCGTGCCCGCCGAGGTCAGGCGCACGCTGG
GAATCGACGACACGCTTGTCCGCCTGTCTGTGGGCATCGAGTCCTTGCCG
GATTTGATCGAGGACTTGGACAGGGCCTTGGAGGCTGCGGGGGCGGCGAC
CGCCTAGGGGGGTCGGATGGGACAGAGGCAGTGCCGGGACACAGGAGAGG
GAGGGGTGTTTGTGCGGCTTGTGAATGTCATCTTGCATGGAATCAAATAA
AACGTTGCATGACGTGCTGTGCTTTACAGGGCTTATGCGTACTTTGCAAT
GTTACACGCTGAAATCACTATCGTCGTCATCGTCTGAAAAGCTCTCCTCT
T back to topprotein sequence of rna1919 >rna1919-protein ID=rna1919-protein|Name=rna1919|organism=Nannochloropsis gaditana|type=polypeptide|length=464bp
MSWVLLIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGF
VHLLHDAVSSLSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGE
HHHLDHIQVDKGTECFPSQWEWQAGDSPSGLFRSISQTKIRKSERQDLLP
PLHQYGAVMPRLAPSSSETEPACEKDTAGVIVENHMNENESKNATEDAGR
QLPGKKDSCSQAGKAAHQENDGMRTGLLAHLRQTQAPILPSQSSEGHDEG
KAQSLESTHGRVSPGSKSPSTRRSHPGMSAPSHCHSHSRKHSHSLSHSHI
HDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQV
GVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGV
LISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSL
TVGFLAMSALFLVA back to topmRNA from alignment at CM002458.1:466160..468320+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1919 ID=rna1919|Name=rna1919|organism=Nannochloropsis gaditana|type=mRNA|length=2161bp|location=Sequence derived from alignment at CM002458.1:466160..468320+ (Nannochloropsis gaditana)
TTGCCCGGGCCTTCTACGTGTGTCAAATACTCAAAACAACCTCCACCACA
TTTATTAGGCTTTGTTTTATTGCTCAAGATCGTACTGAAAAGGAATTAAA
GTCTCTTTGGCCCGGAACAACCTCCTCGCGCGTCTCCGCGGCTGCTGGTG
AAGTTCTATTGAAATCTACGCCTCGGCTTTCAAGTCTCAGCCCACTTATC
ACAATGTCGTGGGTGCTTTTGATATACACTTTGGCCATATGGTTGGTGGG
ACTGGGGGGAGTTCTGGCGCCGATCGTCATGGCTTCGTACAACAAGATGG
TGTTGGCAGTGTGCAACAGCTTTGCGGCAGGAGTCATGCTCTCGGCGGGc
ttcgtccacctcctccacgacgccgtctcctccctgtccgggCTCCAGGA
GAAATTGTATGGGTTCCCCATCAGCGAGTTTGTCTGTGCCCTTTCCTTTA
TCATGGTGTTTTACATTGAAACACTCTTCGCACCGCCTGTCAAGTCCGGg
gagcaccaccacctcgacCACATCCAGGTGGACAAAGGAACCGAGTGCTT
CCCGTCCCAGTGGGAATGGCAGGCCGGAGATTCTCCCAGCGGACTTTTTC
GCTCTATCAGTCAAACCAAGATCAGGAAGTCTGAGCGCCAAGATCTGTTG
CCTCCGCTTCATCAATACGGCGCCGTCATGCCGCGCCTAGCGCCCTCAAG
CTCCGAGACGGAGCCGGCCTGTGAGAAAGATACCGCTGGCGTGATTGTGG
AGAATCACATGAATGAGAACGAAAGCAAAAACGCAACAGAAGACGCTGGG
CGGCAACTgcccgggaagaaggattCATGCAGCCAGGCCGGCAAGGCCGC
CCACCAAGAAAACGACGGGATGCGGACGGGGCTTCTGGCGCATCTGAGGC
AGACACAGGCCCCCATTCTCCCGTCGCAAAGCTCTGAGGGGCACGACGAG
GGCAAAGCACAGTCATTGGAAAGCACCCACGGAAGAGTGTCGCCTGGATC
GAAGTCGCCCTCCACTCGGCGCTCGCACCCCGGGATGAGCGCTCCCAGCC
ACTGTCATAGTCACAGTCGCAAACACAGCCACAGCCTTAGCCACAGCCAT
ATTCATGATGAGGCCCACGGTCACGAGGACCTTCACACCGTGGCGGGCGC
CCTGTGCCTGCTGGCGGCGCTAGGCTTTCATTCCGTcatggaggggctgg
ggctgGCCACGGCCACCTCGCAGAGCATAGTGGACGGGGGCGGGACCCAA
GTCGGGGTCTTCCTGGCCATTTTGGCCCATAAGGGTTTGGCGGGGCTCAC
GCTAGGCTCGACGATGCTCCTAGCGGAGGTGAGCCAGACCGAGTTCCTCC
TCACTGCCGTCCTCTTCTCAGCGGCTACGCCTGCAGGTGTGGCTCTCGGC
GTGCTGATATCCTCCTATTGCCACACAGCAGCGACAGTTGGTCTCATGGG
AGCGGTTGCGGCGGGCACCTTTATCCATGTCGCCGCCATTGAAATTATAC
CCTCGGCTTTCCGAGACTCCAGCGCCACGCAACTGACCAAGCTGATGTCA
CTAACGGTAGGCTTCTTGGCCATGTCCGCCTTGTTCCTGGTGGCTTGAGA
GAGACAGCGCCCGCAGCAGCCGGGCTTGGCGTGGGGCGTCTGCTTTAATC
ATGCTCTTGAATTTCTCGGAAGCTGATCCAGCGTTGGTGAGGTAGGGGCA
ACCGAGCAactgggaaaaaaaaaagtttCTTCGGACCTCGTCAACGAATA
TGGGACGATCAAGAATGTTGAGGGTGGTTGTATCTGATAAGAGACGGAGA
TGATGTAAAAAACTCAGCGACGGAACAGTTTCATGACGACTGTTAGGGGC
GCGTACTAATTTGTCGGGCGTCTCCGCCTcggagggcgagcgaggagagg
aaagaggagaacgATCACAAATCGGAGAAGCTCGTACACCTTGACGTACT
GTTTTATTACCAAGAAAAAATGTGATTATCTCGTCCAAAAAGCTCAAAGA
AGTACGCATGGGTGGAACTTGTCCTTGTAGTGCCCATTTTGTGTTAGAAA
CTCTGGGGTAAGAGGTTTTGGGCGGCTAGTAGAGGCGCTCCAGTCAGTAC
CAAGCTTACACATACATGTCTGAGCCAGTATTGAAGACTTTTATCATGCT
ATCGGAGAATG back to topCoding sequence (CDS) from alignment at CM002458.1:466160..468320+ >rna1919 ID=rna1919|Name=rna1919|organism=Nannochloropsis gaditana|type=CDS|length=1395bp|location=Sequence derived from alignment at CM002458.1:466160..468320+ (Nannochloropsis gaditana)
ATGTCGTGGGTGCTTTTGATATACACTTTGGCCATATGGTTGGTGGGACT
GGGGGGAGTTCTGGCGCCGATCGTCATGGCTTCGTACAACAAGATGGTGT
TGGCAGTGTGCAACAGCTTTGCGGCAGGAGTCATGCTCTCGGCGGGcttc
gtccacctcctccacgacgccgtctcctccctgtccgggCTCCAGGAGAA
ATTGTATGGGTTCCCCATCAGCGAGTTTGTCTGTGCCCTTTCCTTTATCA
TGGTGTTTTACATTGAAACACTCTTCGCACCGCCTGTCAAGTCCGGggag
caccaccacctcgacCACATCCAGGTGGACAAAGGAACCGAGTGCTTCCC
GTCCCAGTGGGAATGGCAGGCCGGAGATTCTCCCAGCGGACTTTTTCGCT
CTATCAGTCAAACCAAGATCAGGAAGTCTGAGCGCCAAGATCTGTTGCCT
CCGCTTCATCAATACGGCGCCGTCATGCCGCGCCTAGCGCCCTCAAGCTC
CGAGACGGAGCCGGCCTGTGAGAAAGATACCGCTGGCGTGATTGTGGAGA
ATCACATGAATGAGAACGAAAGCAAAAACGCAACAGAAGACGCTGGGCGG
CAACTgcccgggaagaaggattCATGCAGCCAGGCCGGCAAGGCCGCCCA
CCAAGAAAACGACGGGATGCGGACGGGGCTTCTGGCGCATCTGAGGCAGA
CACAGGCCCCCATTCTCCCGTCGCAAAGCTCTGAGGGGCACGACGAGGGC
AAAGCACAGTCATTGGAAAGCACCCACGGAAGAGTGTCGCCTGGATCGAA
GTCGCCCTCCACTCGGCGCTCGCACCCCGGGATGAGCGCTCCCAGCCACT
GTCATAGTCACAGTCGCAAACACAGCCACAGCCTTAGCCACAGCCATATT
CATGATGAGGCCCACGGTCACGAGGACCTTCACACCGTGGCGGGCGCCCT
GTGCCTGCTGGCGGCGCTAGGCTTTCATTCCGTcatggaggggctggggc
tgGCCACGGCCACCTCGCAGAGCATAGTGGACGGGGGCGGGACCCAAGTC
GGGGTCTTCCTGGCCATTTTGGCCCATAAGGGTTTGGCGGGGCTCACGCT
AGGCTCGACGATGCTCCTAGCGGAGGTGAGCCAGACCGAGTTCCTCCTCA
CTGCCGTCCTCTTCTCAGCGGCTACGCCTGCAGGTGTGGCTCTCGGCGTG
CTGATATCCTCCTATTGCCACACAGCAGCGACAGTTGGTCTCATGGGAGC
GGTTGCGGCGGGCACCTTTATCCATGTCGCCGCCATTGAAATTATACCCT
CGGCTTTCCGAGACTCCAGCGCCACGCAACTGACCAAGCTGATGTCACTA
ACGGTAGGCTTCTTGGCCATGTCCGCCTTGTTCCTGGTGGCTTGA back to top
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