EWM28768.1, cds1914 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|585111191|gb|EWM28768.1| (zinc iron permease [Nannochloropsis gaditana]) HSP 1 Score: 942.184 bits (2434), Expect = 0.000e+0 Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0
Query: 1 MSWVLLIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDAVSSLSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGEHHHLDHIQVDKGTECFPSQWEWQAGDSPSGLFRSISQTKIRKSERQDLLPPLHQYGAVMPRLAPSSSETEPACEKDTAGVIVENHMNENESKNATEDAGRQLPGKKDSCSQAGKAAHQENDGMRTGLLAHLRQTQAPILPSQSSEGHDEGKAQSLESTHGRVSPGSKSPSTRRSHPGMSAPSHCHSHSRKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFLVA 464
MSWVLLIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDAVSSLSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGEHHHLDHIQVDKGTECFPSQWEWQAGDSPSGLFRSISQTKIRKSERQDLLPPLHQYGAVMPRLAPSSSETEPACEKDTAGVIVENHMNENESKNATEDAGRQLPGKKDSCSQAGKAAHQENDGMRTGLLAHLRQTQAPILPSQSSEGHDEGKAQSLESTHGRVSPGSKSPSTRRSHPGMSAPSHCHSHSRKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFLVA
Sbjct: 1 MSWVLLIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDAVSSLSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGEHHHLDHIQVDKGTECFPSQWEWQAGDSPSGLFRSISQTKIRKSERQDLLPPLHQYGAVMPRLAPSSSETEPACEKDTAGVIVENHMNENESKNATEDAGRQLPGKKDSCSQAGKAAHQENDGMRTGLLAHLRQTQAPILPSQSSEGHDEGKAQSLESTHGRVSPGSKSPSTRRSHPGMSAPSHCHSHSRKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFLVA 464
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|301120900|ref|XP_002908177.1| (Zinc (Zn2 )-Iron (Fe2 ) Permease (ZIP) Family [Phytophthora infestans T30-4] >gi|262103208|gb|EEY61260.1| Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family [Phytophthora infestans T30-4]) HSP 1 Score: 92.0485 bits (227), Expect = 7.584e-17 Identity = 64/173 (36.99%), Postives = 88/173 (50.87%), Query Frame = 0
Query: 290 KHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFL 462
+H HSHIH G+ L AL L AL FHSVMEG+G+ +TS + + +AILAHK LA L + +VS+ + L++ +FS TP G+ G L+ H G+ A A GTF+ VA +EIIP +D Q+ K +L G+ AM L L
Sbjct: 182 EHGTEEPHSHIHGIVKGNPIL-----ALVLFIALSFHSVMEGMGMGASTSPAW--------DILVAILAHKSLAAFALALEFIHHKVSRKQLLVSVAVFSLMTPTGILFGRLLVDTNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPR-YQIEKCSALLAGYGAMGVLSL 340
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|1214690195|gb|OWZ05507.1| (Zinc (Zn2)-Iron (Fe2) Permease, partial [Phytophthora megakarya]) HSP 1 Score: 87.0409 bits (214), Expect = 1.215e-16 Identity = 65/166 (39.16%), Postives = 86/166 (51.81%), Query Frame = 0
Query: 297 HSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFL 462
HSHIH G+ L AL + AL FHSVMEG+G+ A+S + D + +AILAHK LA L L VS+ + L + +FS TP G+ G L+ H G+ A A GTF+ VA +EIIP +D Q+ KL +L G+ AM L L
Sbjct: 9 HSHIHGIVKGNPIL-----ALVVFIALSFHSVMEGMGMG-ASSTAAWD-------ILVAILAHKSLAAFALALEFLHHNVSRKQLLSSIAVFSLMTPMGILFGRLLVDSNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPR-YQVEKLSALFAGYGAMGVLSL 160
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|294899829|ref|XP_002776764.1| (zinc transport protein, putative [Perkinsus marinus ATCC 50983] >gi|239883965|gb|EER08580.1| zinc transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 90.5077 bits (223), Expect = 1.530e-16 Identity = 57/159 (35.85%), Postives = 94/159 (59.12%), Query Frame = 0
Query: 303 EAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGV-LISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSAL 460
+ H H+ + A A+ + AL HS+ EGL L + + S + +AI HKGLA LG++ + A+VS+ ++ +V+F+ TPAG+A+G L ++ T G+ A+AAGTF++V A+E +P +F+ S+ + K ++L VG+ AMSAL
Sbjct: 144 DMHHHDVNMSEASAIFIFLALSVHSIFEGLSLGASNNASQI------ASTLIAIAIHKGLAAYALGASFIEAKVSKWRMVIFSVIFAFMTPAGIAIGWGLEAAESDTEVLSGVCSALAAGTFLYVGALEFVPMSFKPGSSYIIWKFVALLVGYGAMSAL 296
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|669148254|ref|XP_008609689.1| (hypothetical protein SDRG_05736 [Saprolegnia diclina VS20] >gi|530738666|gb|EQC36908.1| hypothetical protein SDRG_05736 [Saprolegnia diclina VS20]) HSP 1 Score: 90.1225 bits (222), Expect = 2.002e-16 Identity = 83/240 (34.58%), Postives = 115/240 (47.92%), Query Frame = 0
Query: 228 LAHLRQTQ--APILPSQSSEGHDEGKAQS---LESTHGRVSPGSKSPSTRRSHPGMSAPSHCHSHSRKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSY--CHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSAL 460
LAH Q Q A + P +SE D+ K S LE P +K RK SH H A G TVA L AL FHSV+EGLG+ A SQ GVFLAI+ HKGLA LG+ ML +++++T+FL +LFS + G+ +G +++ +A G+ A+A+GTFI+VA +EIIP F ++ L K + L G+ A+
Sbjct: 99 LAHALQAQGHAHVEPDTTSEDSDDHKMDSAPFLEQVEAATPPVAKK-------------------GRKKSHD-GHIAFDKNASG-----TVA--FVLFVALSFHSVLEGLGIG-AQSQP-------AWGVFLAIIIHKGLAAFALGTGMLKSQMNKTKFLSYMLLFSLMSIFGIIIGWAVNAAESSEDSAAAGICLALASGTFIYVAVMEIIPQEFSHGKSS-LKKTLLLCAGYAVFGAI 302 HSP 2 Score: 63.1586 bits (152), Expect = 2.048e-7 Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 0
Query: 6 LIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDAVSS-----LSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGEHHHLD 105
L+ ++IW+VG G + P + +N+++++ N + GV L+ GF+HLLH A+ + S + E Y FP +E C + F+ V +E L A +++ H H++
Sbjct: 9 LVSLVSIWVVGFVGGVLPFFIRQHNRVLMSQLNCMSGGVFLAGGFMHLLHAAIENPGLVRWSTMDEGAYAFPYAEMFCTIGFLGVLIVEQL-AHALQAQGHAHVE 112
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|294899827|ref|XP_002776763.1| (Zinc transporter, putative [Perkinsus marinus ATCC 50983] >gi|239883964|gb|EER08579.1| Zinc transporter, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 89.7373 bits (221), Expect = 2.006e-16 Identity = 60/173 (34.68%), Postives = 92/173 (53.18%), Query Frame = 0
Query: 289 RKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATV-GLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSAL 460
++ S +L E H ++ + A+ + AL HS++EG+ AT + + D GT V AILAHKGLA LG+ M+ A VS+ LL ++F+ TP G+ +G L S +A G+ ++AAGTFI+V+ +E P FR + K++S GF M+ L
Sbjct: 115 KRPSDNLDSDERILEPDMHSNVFSETSAIFVFLALSVHSILEGM--ATGVASGVDDLYGTLV----AILAHKGLAAFALGANMVEARVSRYRVLLYGLIFAMGTPVGIIIGWLGSRGEESAGLFSGIANSLAAGTFIYVSVMEFFPVTFRHDRGRFIFKVLSFIAGFSLMAIL 281
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|294899825|ref|XP_002776762.1| (Zinc transporter, putative [Perkinsus marinus ATCC 50983] >gi|239883963|gb|EER08578.1| Zinc transporter, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 88.9669 bits (219), Expect = 3.661e-16 Identity = 60/173 (34.68%), Postives = 91/173 (52.60%), Query Frame = 0
Query: 289 RKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATV-GLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSAL 460
+ S +L E H ++ + A+ + AL HS++EG+ AT + + D GT V AILAHKGLA LG+ M+ A VS+ LL ++F+ TP G+ +G L S +A G+ ++AAGTFI+V+ +E P FR + K++S GF M+ L
Sbjct: 115 KSPSDNLDSDKRISEPDMHSNVFSETSAIFVFLALSVHSILEGM--ATGVASGVDDLYGTLV----AILAHKGLAAFALGANMVEARVSRYRVLLYGLIFAMGTPVGIIIGWLGSRGEESAGLFSGIANSLAAGTFIYVSVMEFFPVTFRHDRGRFIFKVVSFIAGFSLMAIL 281
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|675162985|ref|XP_008890377.1| (hypothetical protein PPTG_00688 [Phytophthora parasitica INRA-310] >gi|568109697|gb|ETN24304.1| hypothetical protein PPTG_00688 [Phytophthora parasitica INRA-310] >gi|570961525|gb|ETP26504.1| hypothetical protein F441_00802 [Phytophthora parasitica CJ01A1] >gi|970649611|gb|KUF88832.1| Zinc (Zn2)-Iron (Fe2) Permease (ZIP) Family [Phytophthora nicotianae]) HSP 1 Score: 90.1225 bits (222), Expect = 3.686e-16 Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 0
Query: 297 HSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFL 462
HSHIH G+ L AL + AL FHSVMEG+G+ ++S + + +AILAHK LA L L VS+ + L T +FS TP G+ G L+ H G+ A A GTF+ VA +EIIP +D Q+ K +L G+ AM L L
Sbjct: 196 HSHIHGIVKGNPIL-----ALVVFIALSFHSVMEGMGMGASSSAAW--------DILVAILAHKSLAAFALALEFLHHNVSRKQLLSTVAIFSLMTPTGILFGRLLVDTNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPR-YQIEKCSALLAGYGAMGVLSL 347
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|566033811|gb|ETI56722.1| (hypothetical protein F443_00837 [Phytophthora parasitica P1569] >gi|567971513|gb|ETK96519.1| hypothetical protein L915_00760 [Phytophthora parasitica] >gi|567999838|gb|ETL49871.1| hypothetical protein L916_00753 [Phytophthora parasitica] >gi|568029024|gb|ETM02956.1| hypothetical protein L917_00725 [Phytophthora parasitica] >gi|568059622|gb|ETM56195.1| hypothetical protein L914_00769 [Phytophthora parasitica] >gi|570337518|gb|ETO85466.1| hypothetical protein F444_00829 [Phytophthora parasitica P1976] >gi|570998293|gb|ETP54541.1| hypothetical protein F442_00773 [Phytophthora parasitica P10297]) HSP 1 Score: 90.1225 bits (222), Expect = 3.756e-16 Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 0
Query: 297 HSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFL 462
HSHIH G+ L AL + AL FHSVMEG+G+ ++S + + +AILAHK LA L L VS+ + L T +FS TP G+ G L+ H G+ A A GTF+ VA +EIIP +D Q+ K +L G+ AM L L
Sbjct: 196 HSHIHGIVKGNPIL-----ALVVFIALSFHSVMEGMGMGASSSAAW--------DILVAILAHKSLAAFALALEFLHHNVSRKQLLSTVAIFSLMTPTGILFGRLLVDTNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPR-YQIEKCSALLAGYGAMGVLSL 347
BLAST of EWM28768.1 vs. NCBI_GenBank
Match: gi|673041275|ref|XP_008874598.1| (hypothetical protein H310_10112 [Aphanomyces invadans] >gi|574469808|gb|ETV96821.1| hypothetical protein H310_10112 [Aphanomyces invadans]) HSP 1 Score: 88.9669 bits (219), Expect = 5.440e-16 Identity = 60/150 (40.00%), Postives = 83/150 (55.33%), Query Frame = 0
Query: 289 RKHSHSLSHSHIHDEAHGHEDLHTVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLI--SSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAF 436
RK SH HDE + + A A L AL FHSV+EGLG+ ++ + GVFLAI+ HKGLA LGS ML ++V++ +F+ LFS + G+ +G I S +A G+ A+A+GTFI+VA +EIIP F
Sbjct: 152 RKKSHDE-----HDEHLAFDKNASGAVAFVLFVALSFHSVLEGLGIGAQSTSAW--------GVFLAIILHKGLAAFALGSGMLKSQVNKAKFIAYMFLFSMMSILGIIVGWCIADSEESEDSAAAGICLALASGTFIYVAVMEIIPLEF 288 HSP 2 Score: 65.0846 bits (157), Expect = 5.102e-8 Identity = 32/91 (35.16%), Postives = 52/91 (57.14%), Query Frame = 0
Query: 6 LIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDA-----VSSLSGLQEKLYGFPISEFVCALSFIMVFYIETL 91
L+ ++IW+VG GG + P + N+ +++ N + GV L+ GF+HLLH A ++ S + E +Y FP +E C + F+ V IE L
Sbjct: 11 LVSLVSIWVVGFGGGVLPFFIRQQNRKLMSRLNCLSGGVFLAGGFMHLLHAAMENPGLAKWSTVDEGIYAFPYAEMFCTIGFLGVLIIEQL 101 The following BLAST results are available for this feature:
BLAST of EWM28768.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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