rna1813, rna1813 (mRNA) Nannochloropsis gaditana

Overview
Namerna1813
Unique Namerna1813
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length864
Alignment locationCM002458.1:212713..214199 -

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Properties
Property NameValue
Productmitochondrial carrier protein
Orig transcript idgnl|cribi|Naga_100133g4.1514.mrna
Orig protein idgnl|cribi|Naga_100133g4.1514
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:212713..214199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100133g4gene1742Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1813rna1813-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28860.1cds1809Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1813 ID=rna1813|Name=rna1813|organism=Nannochloropsis gaditana|type=mRNA|length=864bp
ATGAATGGACAGACAGGGTCAGCCCAAAGTCGAGGGCTGAATGCTTCGGG
TGTTGCCTTTCATCAGTTTTATCACCCTGGTGGCTGTTGTCAAAGCAAAC
ACGTTTCACGAAGATGTATGGTACCCCACCCACCGCGCTCTTCTGGACGA
CATGACCATCCCGAACATCGGCCTCAAGCCCCACCTGCGAGGTCGAAGCC
TCATCAACGTCGACGACGTTCAAGGCGGGGATGGACCCTTCCCAGACCCC
CCCCCTCTCCTGGGAGAACCTTCCTTGCCGGCCGTGGACGAGGAGGAGGA
CCTCAACGGGGTGCCCCTCGGGAACCCGCGCAGGCCCGGGAGTGGAGGGT
CGCATCAGGGCTAGGTTGCAGCGGAGAGGAGCGATACGCCCGCGTCGTCT
CGAATTCAGGTGTCCTATTGCTTTTTCATGTGTCTCATACCATGCAGGCG
GCTCCTCGCTCGTCCTTTGCAGAGGTGGATTTTAACCACGGCCGACAGCT
CGCTTACAGGCGGCCGAAAGCGCTCGTTGGGTCTGGCAGTAAGGGGGAGC
TCTCTCGAAGACGACCCTCCCGGAGGACTCTCGCGGACCTGAGACTTCTC
ACGTGTGTACAGCAGTGGCGAACGTATTTGTCCCCGGGACCATCCGGATT
GAAGAGGGAAGCTCGCAGAAGGAAAGGTTATCAGAAACGGCGTGCCAGCA
GTGTTCTGGGAGTCGGCGTGTTCGATCACAAAGAATTTAGACAGGGCGGT
GCATCTCTTTCGGTCACGAGCGTCAGGACAGAGCTGCCGAAAGAACCCCT
CACTCCCTCCCTCCCTCCCTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCA
GAGCCAGTCTTTGA
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protein sequence of rna1813

>rna1813-protein ID=rna1813-protein|Name=rna1813|organism=Nannochloropsis gaditana|type=polypeptide|length=342bp
MDNYRSAPSSPAPLTKSTVTKRSPPELGQLSPHHVERESRTINARKQVLA
GSIAAFVSTLVCHPIDVLRTELQTTQETLTARECLRRIWRAEGMQGFYKG
LSAPLAAQAVYKAIIFGTNSTAQQLLLARTKKRPRPPSSNLSPQCLSYPE
IFLCGALSGGVNALVVTPVELVRNRLVVSHGVYSGPRDCVGQAWRGGGFR
GLWNGLLPTLCRDGPGVGAWFLAFAAGKDGLLAWKKSTKGLRGGKREAGE
EKLGVGGLLLAGSGAGVAFWTVALPFDTVKSVMQVAGVGSEGKREGMGQV
IERLVREGGLRRLFRGWQGAFGRAVPGSAATLATFDVVKDWL
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mRNA from alignment at CM002458.1:212713..214199-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1813 ID=rna1813|Name=rna1813|organism=Nannochloropsis gaditana|type=mRNA|length=1487bp|location=Sequence derived from alignment at CM002458.1:212713..214199- (Nannochloropsis gaditana)
CAGGGAGCCTAGATGAGAAGGAAAGAAAGCCATCGTCACCCTTCACAGTT
AATTCGTTGTTTCTTGTCGGCGTGCTGTGTGCCGCAACTCGATGGACAAT
TATCGATCAGCGCCCTCGTCTCCCGCTCCTCTTACGAAGTCGACAGTCAC
GAAAAGATCTCCTCCTGAGCTCGGTCAACTTTCTCCACACCATGTCGAGA
GAGAATCCCGTACCATCAATGCCCGGAAGCAGGTGCTTGCGGGCTCGATT
GCTGCATTTGTTTCAACGCTAGTTTGCCATCCCATCGATGTCCTGAGGAC
AGAGCTGCAGACCACGCAAGAGACTCTCACGGCCCGCGAATGCCTCCGCC
GTATTTGGCGGGCAGAAGGAATGCAGGGCTTCTATAAAGGTTTGAGTGCC
CCGCTGGCAGCACAGGCTGTCTACAAAGCGTGAGTAGATACGATACTTAT
TCCGAGACAGGGTGTAACCTCCCCGCCCTCTTTGAGCGATCGCGTATGTC
TATATGAATCTCTCTCCATGGACCCGTGTTTGTGTCCCCCAATATGTGCT
TTAGCCACCAGCCTTTTTCATTCTTTCTTTTCCCACGAGGCACATGCTGA
GATCGTCCACTCGTTCGACCTTTTTGTACCACACATCTCCGCTCCAAACC
TATCTCGAGAAAAACCAACTCACGGAGAGATTGAGACTCTCGCACGGTGC
CACGATGTGACCAAGAGAAAAAAATCCAAGAAGGACTCACTCCTCTCTCG
CACCATCCTATTTTCCCTGTACTTCCCATCTTCCCCCCTGGCAGCATCAT
TTTCGGAACCAACTCCACGGCTCAACAGCTTCTCCTTGCCCGCACTAAGA
AACGCCCCCGCCCTCCCTCCTCCAACCTCTCGCCGCAATGCCTAAGCTAC
CCGGAGATCTTTCTGTGCGGCGCCCTTTCGGGGGGAGTGAACGCCCTGGT
CGTGACTCCGGTGGAACTGGTTCGCAACCGACTGGTTGTGTCCCACGGGG
TGTATTCAGGCCCCCGGGACTGCGTGGGGCAGGCATGGAGAGGAGGGGGG
TTCCGGGGGCTGTGGAACGGCTTGCTCCCCACCCTCTGCAGGGATGGGCC
CGGCGTGGGGGCCTGGTTTTTGGCGTTCGCGGCGGGGAAGGACGGGTTGC
TGGCGTGGAAGAAATCGACCAAGGGCCTGAGGGGAGGGAAAAGGGAGGCG
GGAGAGGAGAAGCTCGGGGTGGGGGGGCTCCTTTTGGCGGGATCGGGGGC
AGGAGTGGCCTTCTGGACGGTGGCTTTGCCGTTTGACACGGTCAAGAGCG
TGATGCAGGTGGCGGGGGTAGGGAGCGAGGGAAAGAGGGAGGGCATGGGC
CAGGTGATAGAGCGCTTGGTTCGAGAGGGAGGGCTCCGGCGTCTCTTCCG
GGGGTGGCAAGGAGCATTTGGGAGGGCAGTGCCTGGGTCGGCAGCGACGC
TCGCGACTTTCGACGTGGTCAAAGACTGGCTCTGAGG
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Coding sequence (CDS) from alignment at CM002458.1:212713..214199-

>rna1813 ID=rna1813|Name=rna1813|organism=Nannochloropsis gaditana|type=CDS|length=2058bp|location=Sequence derived from alignment at CM002458.1:212713..214199- (Nannochloropsis gaditana)
CATCATTTTCGGAACCAACTCCACGGCTCAACAGCTTCTCCTTGCCCGCA
CTAAGAAACGCCCCCGCCCTCCCTCCTCCAACCTCTCGCCGCAATGCCTA
AGCTACCCGGAGATCTTTCTGTGCGGCGCCCTTTCGGGGGGAGTGAACGC
CCTGGTCGTGACTCCGGTGGAACTGGTTCGCAACCGACTGGTTGTGTCCC
ACGGGGTGTATTCAGGCCCCCGGGACTGCGTGGGGCAGGCATGGAGAGGA
GGGGGGTTCCGGGGGCTGTGGAACGGCTTGCTCCCCACCCTCTGCAGGGA
TGGGCCCGGCGTGGGGGCCTGGTTTTTGGCGTTCGCGGCGGGGAAGGACG
GGTTGCTGGCGTGGAAGAAATCGACCAAGGGCCTGAGGGGAGGGAAAAGG
GAGGCGGGAGAGGAGAAGCTCGGGGTGGGGGGGCTCCTTTTGGCGGGATC
GGGGGCAGGAGTGGCCTTCTGGACGGTGGCTTTGCCGTTTGACACGGTCA
AGAGCGTGATGCAGGTGGCGGGGGTAGGGAGCGAGGGAAAGAGGGAGGGC
ATGGGCCAGGTGATAGAGCGCTTGGTTCGAGAGGGAGGGCTCCGGCGTCT
CTTCCGGGGGTGGCAAGGAGCATTTGGGAGGGCAGTGCCTGGGTCGGCAG
CGACGCTCGCGACTTTCGACGTGGTCAAAGACTGGCTCTGAATGGACAAT
TATCGATCAGCGCCCTCGTCTCCCGCTCCTCTTACGAAGTCGACAGTCAC
GAAAAGATCTCCTCCTGAGCTCGGTCAACTTTCTCCACACCATGTCGAGA
GAGAATCCCGTACCATCAATGCCCGGAAGCAGGTGCTTGCGGGCTCGATT
GCTGCATTTGTTTCAACGCTAGTTTGCCATCCCATCGATGTCCTGAGGAC
AGAGCTGCAGACCACGCAAGAGACTCTCACGGCCCGCGAATGCCTCCGCC
GTATTTGGCGGGCAGAAGGAATGCAGGGCTTCTATAAAGGTTTGAGTGCC
CCGCTGGCAGCACAGGCTGTCTACAAAGCCATCATTTTCGGAACCAACTC
CACGGCTCAACAGCTTCTCCTTGCCCGCACTAAGAAACGCCCCCGCCCTC
CCTCCTCCAACCTCTCGCCGCAATGCCTAAGCTACCCGGAGATCTTTCTG
TGCGGCGCCCTTTCGGGGGGAGTGAACGCCCTGGTCGTGACTCCGGTGGA
ACTGGTTCGCAACCGACTGGTTGTGTCCCACGGGGTGTATTCAGGCCCCC
GGGACTGCGTGGGGCAGGCATGGAGAGGAGGGGGGTTCCGGGGGCTGTGG
AACGGCTTGCTCCCCACCCTCTGCAGGGATGGGCCCGGCGTGGGGGCCTG
GTTTTTGGCGTTCGCGGCGGGGAAGGACGGGTTGCTGGCGTGGAAGAAAT
CGACCAAGGGCCTGAGGGGAGGGAAAAGGGAGGCGGGAGAGGAGAAGCTC
GGGGTGGGGGGGCTCCTTTTGGCGGGATCGGGGGCAGGAGTGGCCTTCTG
GACGGTGGCTTTGCCGTTTGACACGGTCAAGAGCGTGATGCAGGTGGCGG
GGGTAGGGAGCGAGGGAAAGAGGGAGGGCATGGGCCAGGTGATAGAGCGC
TTGGTTCGAGAGGGAGGGCTCCGGCGTCTCTTCCGGGGGTGGCAAGGAGC
ATTTGGGAGGGCAGTGCCTGGGTCGGCAGCGACGCTCGCGACTTTCGACG
TGGTCAAAGACTGGCTCTGAATGGACAATTATCGATCAGCGCCCTCGTCT
CCCGCTCCTCTTACGAAGTCGACAGTCACGAAAAGATCTCCTCCTGAGCT
CGGTCAACTTTCTCCACACCATGTCGAGAGAGAATCCCGTACCATCAATG
CCCGGAAGCAGGTGCTTGCGGGCTCGATTGCTGCATTTGTTTCAACGCTA
GTTTGCCATCCCATCGATGTCCTGAGGACAGAGCTGCAGACCACGCAAGA
GACTCTCACGGCCCGCGAATGCCTCCGCCGTATTTGGCGGGCAGAAGGAA
TGCAGGGCTTCTATAAAGGTTTGAGTGCCCCGCTGGCAGCACAGGCTGTC
TACAAAGC
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Synonyms
Publications