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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_102699g1.10364.mrna |
Orig protein id | gnl|cribi|Naga_102699g1.10364 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:204897..205557 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1808 ID=rna1808|Name=rna1808|organism=Nannochloropsis gaditana|type=mRNA|length=679bp CTTCTGAGTCGTTGCGAAATATCCATGCTCACCGCTCCCATGCCATATTT TTTCCCAATGTTTATAGAGCGTATAGATTTCATCTTCACTGTCTTTTTCG TCGACAGCACCCTGCTGTGCTCGTTTCCTTGCTGTAACAGAGCATACGCA GGTGTAGGATGTTGGCCCGACGAGTTTTGAACCAGGTAAGCGCCGAAGAC CAGATCCATCCTATCAACAGTGATAAGCTCACCAACAAAACCCTCTTTGT GGTATACAGGCCATTGTGCGCCGCCACGTGGCTTGTGTCGTTGCATCTGC CCGGAGCAGCACCGGCCTCCACAGCAACGACAGCGGATCTCGCCGCTCTT TGCCCAAGGCATGGACCCTCCGTCCCTCCCACTCCCTCTCCACCTCCGCC CGCCTTGGAGCGGATGTTTTCACGCCCACGGACCAATTTGCCCACCGCCA CATTGGCCCTTCCGTGGCGGAAGAGGCGGAAATGCTGAAATTGTGCGGCT TCAAGACCTTAGAGGCCTTGACCGAGGCGGCCGTCCCAGGCCACATCCGT CTGAAAGCGCCGGTGGATTTGGAGCCCGCCAAGAGCGAGAGCGAGGCCTT GACCGAACTGAAGGCCATCGCCTCCAAAAACAAGGTGCTCAAGTCCTTGA TCGGGATGGGGTACTACGAGACGGGTAGG back to topprotein sequence of rna1808 >rna1808-protein ID=rna1808-protein|Name=rna1808|organism=Nannochloropsis gaditana|type=polypeptide|length=86bp MAITRSERSSLSRRTPTPRTSASFRPVGNLWASRSWLETTGLSISPPKST VGPSSSTPTPMERWMPTTSLCSGRTRPTSWSWQRRT back to topmRNA from alignment at CM002458.1:204897..205557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1808 ID=rna1808|Name=rna1808|organism=Nannochloropsis gaditana|type=mRNA|length=661bp|location=Sequence derived from alignment at CM002458.1:204897..205557+ (Nannochloropsis gaditana) ATGGCCATGTCgaatgcctccctcctggacgaggccaccgccgcggcgga
ggcgatgaGCATGTGCTACTCTCTGAAGAACCAGAAGCGAAAGAAGTTCT
TTGTCTCGAAGGACGCCCACCCCCAGAACATCGGTGAGGCTTACCtggcc
ctctctccctccctccctccctccctccctccctccctgacccTCATTAT
CTCGTCCGGTttcaccttctccccgtctccACCATGTCTGCAAGCTTTCG
Tcctgatccctccctcctccctccctcctccctccctccctccctccctc
ctccctctctccctccctccctccaggcctcctTCAGACCCGTGGGAAAC
CTCTGGGCATCGAGGTCGTGGTTGGAGACCACCGGACTGTCGATTTCACC
TCCAAAGAGTACTGTGGGGCCCTCATCCAGTACCCCAACACCTATGGAAA
GGTAAgcgcagagggagggagggagggagggagggagagaaaggacagga
gggagggaggatgatcTAATCGTCTacccctcatccctccctctcccccg
tcctccctcccctcccctatTCCCTTCCACGGCCCTAGGTGGATGCCTAC
GACGAGTTTGTGCAGCGGGCGCACGCGGCCGACGTCTTGGTCGTGGCAGC
GACGGACCTGA back to topCoding sequence (CDS) from alignment at CM002458.1:204897..205557+ >rna1808 ID=rna1808|Name=rna1808|organism=Nannochloropsis gaditana|type=CDS|length=1044bp|location=Sequence derived from alignment at CM002458.1:204897..205557+ (Nannochloropsis gaditana) ATGGCCATAACCAGAAGCGAAAGAAGTTCTTTGTCTCGAAGGACGCCCAC CCCCAGAACATCGgcctcctTCAGACCCGTGGGAAACCTCTGGGCATCGA GGTCGTGGTTGGAGACCACCGGACTGTCGATTTCACCTCCAAAGAGTACT GTGGGGCCCTCATCCAGTACCCCAACACCTATGGAAAGGTGGATGCCTAC GACGAGTTTGTGCAGCGGGCGCACGCGGCCGACGTCTTGGTCGTGGCAGC GACGGACCTGAATGGCCATAACCAGAAGCGAAAGAAGTTCTTTGTCTCGA AGGACGCCCACCCCCAGAACATCGgcctcctTCAGACCCGTGGGAAACCT CTGGGCATCGAGGTCGTGGTTGGAGACCACCGGACTGTCGATTTCACCTC CAAAGAGTACTGTGGGGCCCTCATCCAGTACCCCAACACCTATGGAAAGG TGGATGCCTACGACGAGTTTGTGCAGCGGGCGCACGCGGCCGACGTCTTG GTCGTGGCAGCGACGGACCTGAATGGCCATAACCAGAAGCGAAAGAAGTT CTTTGTCTCGAAGGACGCCCACCCCCAGAACATCGgcctcctTCAGACCC GTGGGAAACCTCTGGGCATCGAGGTCGTGGTTGGAGACCACCGGACTGTC GATTTCACCTCCAAAGAGTACTGTGGGGCCCTCATCCAGTACCCCAACAC CTATGGAAAGGTGGATGCCTACGACGAGTTTGTGCAGCGGGCGCACGCGG CCGACGTCTTGGTCGTGGCAGCGACGGACCTGAATGGCCATAACCAGAAG CGAAAGAAGTTCTTTGTCTCGAAGGACGCCCACCCCCAGAACATCGgcct cctTCAGACCCGTGGGAAACCTCTGGGCATCGAGGTCGTGGTTGGAGACC ACCGGACTGTCGATTTCACCTCCAAAGAGTACTGTGGGGCCCTCATCCAG TACCCCAACACCTATGGAAAGGTGGATGCCTACGACGAGTTTGTGCAGCG GGCGCACGCGGCCGACGTCTTGGTCGTGGCAGCGACGGACCTGA back to top
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