EWM28869.1, cds1804 (CDS) Nannochloropsis gaditana

Overview
NameEWM28869.1
Unique Namecds1804
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:204897..204904 +
Alignment locationCM002458.1:204975..205029 +
Alignment locationCM002458.1:205223..205347 +
Alignment locationCM002458.1:205485..205557 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28869.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102699g1.10364.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:204897..204904 +
CM002458.1supercontigCM002458.1:204975..205029 +
CM002458.1supercontigCM002458.1:205223..205347 +
CM002458.1supercontigCM002458.1:205485..205557 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28869.1 vs. NCBI_GenBank
Match: gi|585111300|gb|EWM28869.1| (hypothetical protein Naga_102699g1 [Nannochloropsis gaditana])

HSP 1 Score: 159.073 bits (401), Expect = 2.892e-49
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    1 MAITRSERSSLSRRTPTPRTSASFRPVGNLWASRSWLETTGLSISPPKSTVGPSSSTPTPMERWMPTTSLCSGRTRPTSWSWQRRT 86
            MAITRSERSSLSRRTPTPRTSASFRPVGNLWASRSWLETTGLSISPPKSTVGPSSSTPTPMERWMPTTSLCSGRTRPTSWSWQRRT
Sbjct:    1 MAITRSERSSLSRRTPTPRTSASFRPVGNLWASRSWLETTGLSISPPKSTVGPSSSTPTPMERWMPTTSLCSGRTRPTSWSWQRRT 86
The following BLAST results are available for this feature:
BLAST of EWM28869.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111300|gb|EWM28869.1|2.892e-49100.00hypothetical protein Naga_102699g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1808rna1808Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications