EWM28901.1, cds1774 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|585111342|gb|EWM28901.1| (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 856.284 bits (2211), Expect = 0.000e+0 Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0 Query: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 427 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS Sbjct: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 427
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|585111341|gb|EWM28900.1| (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0 Identity = 412/427 (96.49%), Postives = 412/427 (96.49%), Query Frame = 0 Query: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 427 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKK ALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS Sbjct: 1 MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAASLLSLPTHQAFPASALPPESTPKK---------------ALREEGNNNAKVRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPSLNVPRRWPPLSS 412
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|1210526797|dbj|GAX14445.1| (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 123.25 bits (308), Expect = 1.292e-27 Identity = 61/115 (53.04%), Postives = 74/115 (64.35%), Query Frame = 0 Query: 151 SDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 263 SD +A K L + R G+ RRGKWT EEE YV RV + F+ G L AGTTLR+YL++KL CDPMRITKKF+G IGK +FHP + P + +A EL LE W RRLE Sbjct: 141 SDTDASKLLGSER---NGRLRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLE 252
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|1072237911|gb|OEU22638.1| (putative chitinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 118.242 bits (295), Expect = 2.402e-25 Identity = 57/99 (57.58%), Postives = 65/99 (65.66%), Query Frame = 0 Query: 167 GGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 263 G RRGKWT EEE YV RV + F+ G L AG TLRSYL+DKL CDPMRITKKF+G IGK +FHP + + +A ELD LE WRRRLE Sbjct: 188 GTTRRRGKWTVEEEEYVARVIQDFNSGFLNAPAGYTLRSYLSDKLQCDPMRITKKFTGESCIGKRVFHPAVRSAANSGSIDKAQAELDALETRWRRRLE 286
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|813152479|ref|XP_012201238.1| (hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65] >gi|641534135|gb|KDO28094.1| hypothetical protein SPRG_20254 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 114.39 bits (285), Expect = 3.370e-25 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 170 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 265 +R+GKWT EE VY R+T F +GLLPL GT LR YLADKLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + R+EE+ Sbjct: 57 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 154
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|669154792|ref|XP_008612958.1| (hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >gi|669154794|ref|XP_008612959.1| hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530735493|gb|EQC33735.1| hypothetical protein SDRG_08838 [Saprolegnia diclina VS20] >gi|530735494|gb|EQC33736.1| hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 114.39 bits (285), Expect = 5.242e-25 Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 170 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 265 +R+GKWT EE VY R+T F +GLLPL GT LR YLADKLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + R+EE+ Sbjct: 69 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLADKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVNARMQSVQTELKALETAFLHRIEEM 166
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|1173929319|gb|OQR82570.1| (hypothetical protein ACHHYP_15855 [Achlya hypogyna]) HSP 1 Score: 112.464 bits (280), Expect = 1.407e-24 Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 0 Query: 170 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 265 +R+GKWT EE VY R+T F +GLLPL GT LR YLA+KLNC+PMRITKKF+G IGK IF P +PP PL +M EL LE + +R+EE+ Sbjct: 66 FRKGKWTDEESVYAERMTHYFKEGLLPLEKGTMLRMYLAEKLNCEPMRITKKFTGDECIGKQIFRP-LPPTPLVTARMQSVQTELKALETAFLQRIEEM 163
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|219111487|ref|XP_002177495.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217412030|gb|EEC51958.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 114.39 bits (285), Expect = 4.957e-24 Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 171 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCM--PPQPLKMAEAMVELDRLEAIWRRRLE 263 RRGKWT EEE YV RV + F+ G L AGTTLR++L++KL CDPMRITKKF+G IGK +FHP + P + +A EL LE W+RRLE Sbjct: 227 RRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRWQRRLE 321
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|1173956668|gb|OQS03402.1| (hypothetical protein THRCLA_04298 [Thraustotheca clavata]) HSP 1 Score: 110.153 bits (274), Expect = 7.815e-24 Identity = 55/99 (55.56%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 170 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPL---KMAEAMVELDRLEAIWRRRLEEI 265 +R+GKWT EE VY R++ F +GLLPL GT LR YLA+KLNC+PMRITKKF+G IGK IF P MPP PL +M EL LE + R+EE+ Sbjct: 48 FRKGKWTEEESVYAERMSYYFKEGLLPLEKGTMLRMYLAEKLNCEPMRITKKFTGDECIGKQIFRP-MPPTPLVSVRMQSVQAELKALETAFLNRIEEM 145
BLAST of EWM28901.1 vs. NCBI_GenBank
Match: gi|953486150|emb|CEG50328.1| (hypothetical protein PHALS_08047 [Plasmopara halstedii]) HSP 1 Score: 110.153 bits (274), Expect = 4.435e-23 Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0 Query: 170 WRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPC--MPPQPLKMAEAMVELDRLEAIWRRRLEEIR 266 R+GKWT EE Y ++T+ F +GLLP+ GT LR YL+ KLNC+PMRITKKF+G IGK +F PC P L++ +A VEL LEA + +RL+E R Sbjct: 130 LRKGKWTEEESRYAAQLTKYFKKGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSLTPESRLRIMQAQVELVALEAAFLKRLKENR 228 The following BLAST results are available for this feature:
BLAST of EWM28901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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