Naga_100822g1, gene1709 (gene) Nannochloropsis gaditana

Overview
NameNaga_100822g1
Unique Namegene1709
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:102807..105386 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100822g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:102807..105386 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL107ngnoL107Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05250NO04G05250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1778rna1778-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1779rna1779-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1778rna1778Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1779rna1779Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1778

>rna1778-protein ID=rna1778-protein|Name=rna1778|organism=Nannochloropsis gaditana|type=polypeptide|length=427bp
MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAA
SLLSLPTHQAFPASALPPESTPKKMRSMLLLPLCPPPQQALREEGNNNAK
VRDEDAMIKREGTHSCEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPE
SDVEALKALAASRVATGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAG
TTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVE
LDRLEAIWRRRLEEIRAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPS
FYQQHYPPQQYPQHHPPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQG
PPSLPRAPPLPPSSLPSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVG
ALCIISIPPPFLSPSLNVPRRWPPLSS
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protein sequence of rna1779

>rna1779-protein ID=rna1779-protein|Name=rna1779|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MASPASLIPNQASGSSRNDAVRGDWVNACSHIKAECDHDEIRGRHGGHAA
SLLSLPTHQAFPASALPPESTPKKALREEGNNNAKVRDEDAMIKREGTHS
CEGSSGAGSGGNEIGDGTSSSAVGLSSEAEGRGPESDVEALKALAASRVA
TGGKWRRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDP
MRITKKFSGVGSIGKCIFHPCMPPQPLKMAEAMVELDRLEAIWRRRLEEI
RAVEYEFQQSASLSSQGSATSPSFPPSLGPSLPPSFYQQHYPPQQYPQHH
PPYPYHPQHHPHGPHPPATGVPPSSYPDSCGAWQGPPSLPRAPPLPPSSL
PSEPTSSSVLSLPPGLPSGAPAPGSRPSQRVVAVGALCIISIPPPFLSPS
LNVPRRWPPLSS
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Synonyms
Publications