rna1756, rna1756 (mRNA) Nannochloropsis gaditana

Overview
Namerna1756
Unique Namerna1756
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length854
Alignment locationCM002458.1:48895..50206 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100441g5.4667.mrna
Orig protein idgnl|cribi|Naga_100441g5.4667
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:48895..50206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100441g5gene1689Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1756rna1756-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28921.1cds1752Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1756 ID=rna1756|Name=rna1756|organism=Nannochloropsis gaditana|type=mRNA|length=854bp
TCCAGGAAATTATGCGTCTCCTACATTTCCTCTCTTTCGTCTCTCTTTCG
AGTGCCTTTCTTCTTCCTTCCCTCCCCTCCTCTTCCTCCCCGCTGTCAAA
ACGGGGCCGGGCTCTGGCGTCTTCTGCTTCCGAAGAACTCTCTCGAAAGG
AAAAAAGCAAGGAGCAAGTCCGTTCGCTTTTGAAAGGATTGGGTGAATTA
GACGATGAAGACGGCCCCAGCGAAAGCGGAAGCAGCAAACGCAAGGAAAA
ACGAGAGGGAGTGGACGCCGCCAGGCGGGCATTAGCTGACAAGGATAAGA
TGAAATTGGAGCCGGAATCCGTCTTCTTCGAGGGAGCACCGCATTGGAGT
GAGGTGGTAGTCCCTGCCATCTCCATCCTCACCGTCATCGGCATCATTCC
CTTCGCGTCCTCCGTGGCGCGACAGATTTGGGTCAAATATAAGATCACCT
CGCGGCGAATTTCTGTGACCAGCGGAGTGGGTGGGAAGGACTTGACTGAG
GTCATCTACGCGGACATCGAACGCATCAACTACGTCTTTCGCGCCTTCGG
AACCACAGGTGACATGGTCCTCTTCCTCCGTGATGGCGCCAAGCTGGAAA
TTCGCTCCCTTCCCAATTTCCGGGATGTGTACAACTACATCCGCAGTCAG
CTGGACGACGACGCCCGCGAGCAGACCCCTGCCTTGCCGGAGCCGAAATA
AGGGGGGAGGGCACGGGGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAAGCATGGCCCATGTTGGGACGCTGGTGATTC
TCGGGGTACAGAGGACGTAACATAAAGAAAATAAATTCTGCCACCGCCTC
CTTC
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protein sequence of rna1756

>rna1756-protein ID=rna1756-protein|Name=rna1756|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MMISSPLDLPLSPANGTSTATSVVSDGQEKVGFTQDAMQDSGGTKHGERE
DREEDWRRDREDEEGRDGEGRLRRAALAEKDYAEDNEGNGGVEESTSEVA
ERQEAVGSEEGGKEGEVEGAGEGPPVREEENDGTFVHLSNLRLNVRRKE
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mRNA from alignment at CM002458.1:48895..50206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1756 ID=rna1756|Name=rna1756|organism=Nannochloropsis gaditana|type=mRNA|length=1312bp|location=Sequence derived from alignment at CM002458.1:48895..50206- (Nannochloropsis gaditana)
GTGGCGCCGTTTCGTGGACGTAGTGGAAAATATGCAAGGGCCGACACCAC
TCAAATCGCCTGCACTATGGAGATGGATTGGTCAGCTTAGTCTATTTTTT
GTTGGAAAGTTGAAGTCAGTTTATTCTATCTCGACTAGGACTGCTTTCTC
AAGATCCTTGCCTTGAGCACAACAGGGGGGGAAATTACAGAGCCATGCAC
GACATCGCCTGCCCGCTACAGGTCTTTCTTTATCCTCCAAGACCGGAAGT
ATAATAGGTTATGTTTGGCGTTGATACAGAGCCTACCCCGTACACTTGAA
CCCTCCGCTGGGCTCTCCCAACCTCCCCCCTCGCCTTCCTGCTAACACTT
CCTCTCCCTCCTTACGGATTTCCAACAGAGACTGTTGCACATGCCCCCTT
TTGCACGGAAAGGTCCGCGTTAAAGTCTTTAAGGCCTCCTGTGTCTCTTC
GACAAATTATAAAGAATATCATTCACATGAAAGCACCCAGATGTAGGCGT
TTTCTTGGCACGGCACGACAAAGTCTCCTTCCAACCCTCGTAGACAGTCT
TCCGGGCTCACTCATGCACACTCAACTCACAGACCTGCCCCTCGAAACAC
TGAAAGAGCGTTTAGTAGCGAATGATGATATCCTCTCCGCTTGACCTGCC
GCTCTCCCCAGCCAACGGTACAAGTACCGCTACCAGCGTCGTCTCAGACG
GCCAGGAGAAAGGTAGGGAGGGACAATTAATGCTAGTAAGAGAGGTCGAC
GGTGAAATTGAGAAAGATAATTTGGTGTATATCTTTCAAGAGGATGTCGA
CTTTTTGGCCCAATGCTCGTCGTCCAATAGGCTGTATTCTGCTTGCATTC
TACTAGAAAAGCAAAGCTTCCTTCATGTCTATCTGGGAAAGGAGGCAATT
TTTTACTCAGAAGGTATTGTCATCTCGCCTGTGACAAATTTCTCCCTCTT
CAGTGGGATTCACACAGGACGCGATGCAAGACAGCGGTGGGACGAAGCAC
GGGGAAAGGGAGGACAGAGAAGAGGATTGGAGGAGGGACAGGGAGGACGA
GGAAGGGAGGGATGGAGAGGGCCGCTTGCGCCGGGCGGCTTTGGCGGAGA
AAGACTACGCAGAGGACAACGAGGGCAATGGAGGGGTGGAAGAAAGTACG
AGTGAGGTGGCGGAAAGGCAGGAGGCGGTGGGGTCGGAGGAGGGAGGGAA
GGAGGGCGAGGTGGAGGGGGCGGGGGAGGGCCCTCCGGTGCGGGAGGAAG
AGAACGACGGGACCTTCGTCCATCTGTCGAACCTGCGCTTGAACGTAAGG
CGGAAGGAATGA
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Coding sequence (CDS) from alignment at CM002458.1:48895..50206-

>rna1756 ID=rna1756|Name=rna1756|organism=Nannochloropsis gaditana|type=CDS|length=900bp|location=Sequence derived from alignment at CM002458.1:48895..50206- (Nannochloropsis gaditana)
TGGGATTCACACAGGACGCGATGCAAGACAGCGGTGGGACGAAGCACGGG
GAAAGGGAGGACAGAGAAGAGGATTGGAGGAGGGACAGGGAGGACGAGGA
AGGGAGGGATGGAGAGGGCCGCTTGCGCCGGGCGGCTTTGGCGGAGAAAG
ACTACGCAGAGGACAACGAGGGCAATGGAGGGGTGGAAGAAAGTACGAGT
GAGGTGGCGGAAAGGCAGGAGGCGGTGGGGTCGGAGGAGGGAGGGAAGGA
GGGCGAGGTGGAGGGGGCGGGGGAGGGCCCTCCGGTGCGGGAGGAAGAGA
ACGACGGGACCTTCGTCCATCTGTCGAACCTGCGCTTGAACGTAAGGCGG
AAGGAATGAATGATGATATCCTCTCCGCTTGACCTGCCGCTCTCCCCAGC
CAACGGTACAAGTACCGCTACCAGCGTCGTCTCAGACGGCCAGGAGAAAG
TGGGATTCACACAGGACGCGATGCAAGACAGCGGTGGGACGAAGCACGGG
GAAAGGGAGGACAGAGAAGAGGATTGGAGGAGGGACAGGGAGGACGAGGA
AGGGAGGGATGGAGAGGGCCGCTTGCGCCGGGCGGCTTTGGCGGAGAAAG
ACTACGCAGAGGACAACGAGGGCAATGGAGGGGTGGAAGAAAGTACGAGT
GAGGTGGCGGAAAGGCAGGAGGCGGTGGGGTCGGAGGAGGGAGGGAAGGA
GGGCGAGGTGGAGGGGGCGGGGGAGGGCCCTCCGGTGCGGGAGGAAGAGA
ACGACGGGACCTTCGTCCATCTGTCGAACCTGCGCTTGAACGTAAGGCGG
AAGGAATGAATGATGATATCCTCTCCGCTTGACCTGCCGCTCTCCCCAGC
CAACGGTACAAGTACCGCTACCAGCGTCGTCTCAGACGGCCAGGAGAAAG
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Synonyms
Publications