EWM28943.1, cds1732 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|585111413|gb|EWM28943.1| (hypothetical protein Naga_100347g2 [Nannochloropsis gaditana]) HSP 1 Score: 1944.09 bits (5035), Expect = 0.000e+0 Identity = 973/973 (100.00%), Postives = 973/973 (100.00%), Query Frame = 0 Query: 1 MGRPSARHCHILVPALAIVPFLRVTDAFLVPSSVVTRVASPLSSTPASIRFSQNEQQGYSSRHPVKRRRESLLFTPLTLAATTSSSSASVSIEGQSPIVFRADIAGMSRKQALAWLHAWCTRSLPSPPPSASSSSSSPASLSTRPYGGQSGSTTAYAARLQARPGLPVGVTSLPISPTLTDQGARLVCEGLGPAFLDVEVLENGRQASKISLVVRQCMGQAKMQQHSLSIRGLARDTEKTVLEKLESDLVVALRGGEGEGEGVGVEFRTGSEAEAMEGFFEAVPASSEAVDVDDEHLEDKGLRQGPGVEGEGQGSGRQTKSETGPEDRVEKPDKEEEDARLRELIETLGLAEALDLEERGEGGEGGQKNGWADPNSPFAKKAVAAYEAFVQAQKGPGAEQGGDVASAVAGMGDVVMEELRERGAGGGGTPEDVKAMFESGLRSAKQEADRVAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKGGVDVMAGPPGEESLDLRSWERGAEEARVGREGEARSEEVEDDEDEDEWDEALGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKEEKEEHGVLSVGAASIEEALREEGLL 973 MGRPSARHCHILVPALAIVPFLRVTDAFLVPSSVVTRVASPLSSTPASIRFSQNEQQGYSSRHPVKRRRESLLFTPLTLAATTSSSSASVSIEGQSPIVFRADIAGMSRKQALAWLHAWCTRSLPSPPPSASSSSSSPASLSTRPYGGQSGSTTAYAARLQARPGLPVGVTSLPISPTLTDQGARLVCEGLGPAFLDVEVLENGRQASKISLVVRQCMGQAKMQQHSLSIRGLARDTEKTVLEKLESDLVVALRGGEGEGEGVGVEFRTGSEAEAMEGFFEAVPASSEAVDVDDEHLEDKGLRQGPGVEGEGQGSGRQTKSETGPEDRVEKPDKEEEDARLRELIETLGLAEALDLEERGEGGEGGQKNGWADPNSPFAKKAVAAYEAFVQAQKGPGAEQGGDVASAVAGMGDVVMEELRERGAGGGGTPEDVKAMFESGLRSAKQEADRVAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKGGVDVMAGPPGEESLDLRSWERGAEEARVGREGEARSEEVEDDEDEDEWDEALGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKEEKEEHGVLSVGAASIEEALREEGLL Sbjct: 1 MGRPSARHCHILVPALAIVPFLRVTDAFLVPSSVVTRVASPLSSTPASIRFSQNEQQGYSSRHPVKRRRESLLFTPLTLAATTSSSSASVSIEGQSPIVFRADIAGMSRKQALAWLHAWCTRSLPSPPPSASSSSSSPASLSTRPYGGQSGSTTAYAARLQARPGLPVGVTSLPISPTLTDQGARLVCEGLGPAFLDVEVLENGRQASKISLVVRQCMGQAKMQQHSLSIRGLARDTEKTVLEKLESDLVVALRGGEGEGEGVGVEFRTGSEAEAMEGFFEAVPASSEAVDVDDEHLEDKGLRQGPGVEGEGQGSGRQTKSETGPEDRVEKPDKEEEDARLRELIETLGLAEALDLEERGEGGEGGQKNGWADPNSPFAKKAVAAYEAFVQAQKGPGAEQGGDVASAVAGMGDVVMEELRERGAGGGGTPEDVKAMFESGLRSAKQEADRVAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKGGVDVMAGPPGEESLDLRSWERGAEEARVGREGEARSEEVEDDEDEDEWDEALGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKEEKEEHGVLSVGAASIEEALREEGLL 973
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|553185635|ref|XP_005854282.1| (cs-domain containing conserved in apicomplexa, partial [Nannochloropsis gaditana CCMP526] >gi|422294779|gb|EKU22079.1| cs-domain containing conserved in apicomplexa, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 715.301 bits (1845), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0 Query: 597 HNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKE 948 HNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKE Sbjct: 1 HNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETLLHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQGDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKE 352
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|298713278|emb|CBJ26974.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.768 bits (273), Expect = 8.650e-21 Identity = 63/189 (33.33%), Postives = 103/189 (54.50%), Query Frame = 0 Query: 644 AEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNELSEAELSLAGRVLEVEDVLEELHPDSSLLALLQ 832 A V Q+ +M Q E+QQL+KI+ IC A EDM L + + K LD+ FV Y+ Y ++ E+ + G+ P+REPS WL +L +++KGV EL K+V DV ++ + R E +ER L ++ L + FKR +VD++E+ + + +L VLE+ + L+ L + + L + Sbjct: 366 AVNTVQQLAKMHQKLEMQQLEKIRDICEAALEDMDTLPDKIRYMKPLLDDKFVAYMGYAIQTEREAVDKRGLN-PDREPSRWLQVLGVIQKGVMAELQKSVHQDVELISHVLRMKEPEERLALLNITISTLPSMYIRGFKRTATNIVDYYEAMGDNCMDQDLR--SMVLEIGENLKVLMSEERMAVLTK 551
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|523570526|gb|EPR57457.1| (hypothetical protein TGGT1_305020 [Toxoplasma gondii GT1]) HSP 1 Score: 109.768 bits (273), Expect = 1.399e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIINKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|1005156836|gb|KYF44824.1| (CS domain protein [Toxoplasma gondii ARI]) HSP 1 Score: 109.383 bits (272), Expect = 1.746e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|1085082351|ref|XP_018636123.1| (hypothetical protein TGME49_305020 [Toxoplasma gondii ME49] >gi|527310723|gb|EPT27356.1| hypothetical protein TGME49_305020 [Toxoplasma gondii ME49] >gi|557732847|gb|ESS29025.1| CS domain protein [Toxoplasma gondii VEG] >gi|820700444|tpe|CEL76177.1| TPA: hypothetical protein BN1205_106340 [Toxoplasma gondii VEG]) HSP 1 Score: 109.383 bits (272), Expect = 1.791e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|672251521|gb|KFG28423.1| (CS domain protein [Toxoplasma gondii p89]) HSP 1 Score: 109.383 bits (272), Expect = 1.853e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|672561386|gb|KFH02535.1| (CS domain protein [Toxoplasma gondii VAND]) HSP 1 Score: 108.997 bits (271), Expect = 2.142e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|672566948|gb|KFH06978.1| (CS domain protein [Toxoplasma gondii MAS]) HSP 1 Score: 108.997 bits (271), Expect = 2.216e-20 Identity = 65/220 (29.55%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L+ EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 1240 ARLDMLLCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1447
BLAST of EWM28943.1 vs. NCBI_GenBank
Match: gi|675129746|ref|XP_008886760.1| (hypothetical protein HHA_305020 [Hammondia hammondi] >gi|661334409|gb|KEP62554.1| hypothetical protein HHA_305020 [Hammondia hammondi]) HSP 1 Score: 108.227 bits (269), Expect = 4.129e-20 Identity = 65/220 (29.55%), Postives = 108/220 (49.09%), Query Frame = 0 Query: 570 ARFDVLVRELEATVDSPDLLPAIASQYHNVFLSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQVQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQYLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSMVHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQM 789 AR D+L EL D + P I QY ++ + HFL +M+ R++ E+D + + +F + V+ + E +QL KI+ +C A D+ +L+EY S K L+ DF+ YL++ + AE+ R++ G P+ PS WLM+L I+ KGV K + +DV + + + + R L VA++ + FKRV +M Sbjct: 853 ARLDMLFCELMEVTDE-SMFPVICDQYKDLLMDEHFLLIMKLRIQERPPRSRREKD----------IFVIVNKFTVSLYEDVESLALQNEKEQLKKIRLLCMQALVDIDKLTEYAESMKHLLNRDFLAYLEFAIHAERKRIQKEG-NNPDAAPSQWLMVLMIIHKGVMSIYEKEIWEDVMWITMVVTQKQPEVRRKLLELFVAQIPKADWKQFKRVALRM 1060 The following BLAST results are available for this feature:
BLAST of EWM28943.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|