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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100347g2.10705.mrna |
| Orig protein id | gnl|cribi|Naga_100347g2.10705 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1372607..1375758 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1736 ID=rna1736|Name=rna1736|organism=Nannochloropsis gaditana|type=mRNA|length=2137bp
GCTCAAGGCGGGAGGCGACCTCCGGGAGCTGCATGAGGGAGTCAGCTGTC
AGACGCTGGGCGGGATCGTGATGGAGGAGGCGGGAGAGGATCACGTGGCG
GAGGTCGTGCGAGTAGACCGTGTCCGTTGCCAGGTCGGACTGAAACTGAC
GCTTCAAAACCGCCCGGCGCAAATGCAGGGGAGTGGGACCGTCGAAGGGG
GGCACCAGCTTCGTGAGCTCAAAAAGTGTGCAGCCAAGAGAATACAAATC
GGATGCAAAGCCGTAAGGTTTTCCCTCCCAAATTTCGGGCGCCATGTAGG
GAAGTGTGCCCCAGACGGCGTGGATCTCACCTGTCTCGTCGTCGAGGCAT
TTGGAGACGTTAAGGTCCCCCAATTTGGCATTCCCCTCCTTATCGAGCAA
TATATTCGCTGGTTTAATGTCACGATGGAGGACACGGAGAGCATGCAGCG
CGGACAGTGCCTCCAAGCACTGCACCAAGTATACCCAAACCACTCGCTCG
TCCACCCTCTCGCCCCTTGCTCGATACCGCTGGATCTTACGGGCCAGGTC
CTGGAATCCGCAGTACTCCATGACAATGCACAAATGTGTAGGACCGTCAA
GAAAAGTTTCATAGCAGCGGATAATCCGCGGATGCCGGAAAGAGGACAAA
AGACGGATTTCATTGAGGGCCATGGCAAGGTCTCGCTGATCGAGCCCTTC
TAGGTTCACGCGCTTAATTGCGTACGTATGATTGTCTGCTTTACGTATAA
CTTGATAAACGCTTCCATAAGCTCCTAATCCGAGCTTAGATAAGACATGG
AAGTCTTGAATTGTCGTGATGGGGTTGTGTGAAGAGGAGTTCGGAGATAA
AGCAGGGAGGAAGGAAGACGAAGAGGTCGGACGCTCGTTTTTACTGGGTT
CCATCCCAAAGGTACAGCGCTAAAATTCGATATCGACCTATGTTATGGGA
TAAATTGCATTAAATGATGATGAGCGAGTGCCACTGACTTGCTTCGCGTC
AATGCAAGTCGGGTGGAAAGGGAGGAAGCAGCGGATCGATTTCAAGACGT
TGGGGCAACGGCTGGCGTGACGTACCTCGTTCGGGTCATAAACCCTGAGA
TGACAGCGACACGGGAAGCCTTGGCTTGAGAAGCACGCAGCGCATTGAGA
TGCATCCATATCTCTCCGCTGAGTGATCGTGCTGCATCTCGCATATCTTT
AAACTTACCACAAGCACCCTTATTGCATCAAGAAGTAGGACAGCAATTTT
TGGGTCGGACCTGAGGCAATACGGGGAGGCAACGCGTGTTTGATTCAGCA
GCAAGTATGGGAGCTACATCGAAGCTCGTGCTTGCTCTCGCCATTGTCTC
TTGTACGCTCTTTCCTATTGGTGCCTTCTGCCCGATGGTTGAGCGATTGC
CGTCGAAGCGGGTGTCCGCGTTAGTGTTCATGTCTTCGTCTACCTCCTCT
GACATCGCTCCGTCCGCTGCGGCCCGTGGAATCTCCTCCCGTCGTGATTC
CCTCGTTCGTGTCGCCACGACTGCGTCTGCTTTGGTCTTCCTTTCTCCTT
TCAGACATCCAGTATCCGCGGCAGTCAAGGCGTCATCAACCGAGGAAGCA
CAGAAGGCCGCGCGCGAGATCAAAGTCGCTTTGCGCAGCATGGCAGATAT
GCAAGACGCCGCTAGCAAGGCAGAGTGGGAGACAGTCAAAGACCTCCTGG
AAAGGCTAGAATTCAAGAATTTCGAGAATACTGCCACGACTTTGGTGCGC
TCCGACTTACTAACAGCAGAGGATAAGACAAGCTTAGGGACGATCCGCCG
CTTCGGGCTAACTGCCGATTTCATCATCACCTTAGGAGGGCTTGAATCTG
AGCTGCGAGCAGGAGGTGTACTCCCTCCATTAAAAGGAGCCATAGTCGAA
GAGGACGACGAAGGTGGGGAGAAAGGCGTGAACAGACGGGAAGCATTGAA
ATTCGTGAAGTTGGCACGAGGTGCATTACAGGAAATCGATCGAATCACAA
GCAGTGTTTTGCCCGAGGCAGAGCAATGAATTGTAAGCAACGCGAGTCAA
GGCACCTAATAAGCCCGAACTACTTTTATGCTCTTTAAAAGTTTCATGTA
CCATTCTGTTACTTCGGGTCACCTGTGATCTTTCTCC back to topprotein sequence of rna1736 >rna1736-protein ID=rna1736-protein|Name=rna1736|organism=Nannochloropsis gaditana|type=polypeptide|length=973bp
MGRPSARHCHILVPALAIVPFLRVTDAFLVPSSVVTRVASPLSSTPASIR
FSQNEQQGYSSRHPVKRRRESLLFTPLTLAATTSSSSASVSIEGQSPIVF
RADIAGMSRKQALAWLHAWCTRSLPSPPPSASSSSSSPASLSTRPYGGQS
GSTTAYAARLQARPGLPVGVTSLPISPTLTDQGARLVCEGLGPAFLDVEV
LENGRQASKISLVVRQCMGQAKMQQHSLSIRGLARDTEKTVLEKLESDLV
VALRGGEGEGEGVGVEFRTGSEAEAMEGFFEAVPASSEAVDVDDEHLEDK
GLRQGPGVEGEGQGSGRQTKSETGPEDRVEKPDKEEEDARLRELIETLGL
AEALDLEERGEGGEGGQKNGWADPNSPFAKKAVAAYEAFVQAQKGPGAEQ
GGDVASAVAGMGDVVMEELRERGAGGGGTPEDVKAMFESGLRSAKQEADR
VAAKGQRQKQMLAVVKEVAETRQREVGGKGGVKEGLATLEMMFEGTGLKG
GVDVMAGPPGEESLDLRSWERGAEEARVGREGEARSEEVEDDEDEDEWDE
ALGSMGDADPLGDLGWDVAARFDVLVRELEATVDSPDLLPAIASQYHNVF
LSRHFLGLMRARLEACEAAMAGEEDGEGVTAATPVVLARMVRFAEQMVVQ
VQEMGQLYELQQLDKIKAICAVAEEDMGRLSEYVSSRKEDLDEDFVRYLQ
YLMEAEKLRLRGAGVTRPEREPSNWLMILEIVKKGVYHELGKAVRDDVSM
VHFITRFDEADEREHLTRAHVARLAPSQVIPFKRVVNQMVDHFESRVNEL
SEAELSLAGRVLEVEDVLEELHPDSSLLALLQSKEGGVGLEAYKTGAETL
LHDPREWDDSAVAGKEDELFSPEYLAAKYDRILKHYGFSASRQRGRGMGQ
GDAEEEERKAGIGDIEGILGGNADTRGALPAALEAWVGTEKTESGPKEEK
EEHGVLSVGAASIEEALREEGLL back to topmRNA from alignment at CM002457.1:1372607..1375758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1736 ID=rna1736|Name=rna1736|organism=Nannochloropsis gaditana|type=mRNA|length=3152bp|location=Sequence derived from alignment at CM002457.1:1372607..1375758+ (Nannochloropsis gaditana)
TCACGGATGTACACACTCACATTGATCAGCTTTCACAGGTCGCCACCATC
TGCTGTACTTTCATTTCTGCACGAGGAAAACCCCGATAGCTGACCGGCTT
GTCGTCATGGGACGCCCCAGTGCTCGGCATTGCCACATCCTCGTGCCTGC
CCTGGCCAtagtccccttcctccgtgttACGGACGCATTTTTGGTCCCTT
CCTCGGTTGTAACCCGCGTCGCATCACCCCTTTCTAGTACTCCAGCCAGC
ATTCGATTTTCGCAAAATGAGCAGCAGGGGTACTCAAGCCGTCATCCTgt
aaaaagaagaagagagtcTCTCCTTTTCACCCCTCTCACCCTTGCTGCTa
caacctcttcctcatcagcGTCGGTCTCAATTGAAGGACAAAGTCCCATT
GTATTTCGTGCCGATATTGCGGGTATGTCGCGCAAGCAGGCCCTGGCTTG
GCTCCATGCCTGGTGCACACggtcccttccatcccctccgccatctgcct
cttcctcctcttcttccccggcATCACTCAGCACTCGACCTTACGGAGGG
CAAAGCGGCAGCACTACTGCCTATGCGGCACGCCTTCAGGCCCGTCCCGG
ACTACCGGTGGGTGTGACAAGCCTCCCAATATCGCCCACGCTCACCGACC
AGGGTGCCCGCTTGGTCTGTGAGGGCCTGGGCCCGGCATTTTTGGACGTG
GAGGTATTGGAAAATGGAAGGCAGGCGTCGAAAATATCGCTTGTAGTCCG
GCAATGCATGGGCCAGGCGAAAATGCAGCAGCACTCCCTGTCGATTCGGG
GCCTGGCGCGGGACACGGAGAAGACCGTGCTCGAGAAACTCGAGTCTGAC
TTGGTGGTGGCgctgcgagggggggagggcgagggggagggcgtgggtgt
AGAGTTCCGCACAGGATCCGAAGCGGAGGCCATGGAAGGGTTCTTTGAAG
CCGTCCCTGCTTCGTCGGAGGctgtggacgtggacgacgagcacttggag
gacaagggcctCCGACAGGGGCCAGGggtagagggagaaggacagggcAG
CGGCCGCCAGACCAAGAGCGAAACGGGGCCCGAGGACCGCGTGGAGAAGC
CTgataaggaagaggaggatgcacGTCTGCGGGAGCTCATCGAGACTCtg
gggctggcggaggcccttgacctggaggaaaggggcgagggaggggaagg
aggacagaaGAACGGGTGGGCGGACCCGAATTCTCCCTTTGCAAAAAAGG
CGGTAGCGGCGTACGAGGCTTTCGTTCAGGCTCAAAAGGGGCCAGGGGCT
gaacagggaggggatgTTGCCTCGGCAGTGGCGGGGATGGGAGATGTGGT
catggaggagctgagggagcgaggggccggaggggggggaacgccCGAAG
ATGTGAAAGCCATGTTTGAGAGCGGGCTCAGAAGTGCCAAACAGGAGGCG
GATCGGGTCGCAGCTAAAGGTCAGCGGCAGAAGCAGATGCTTGCGGTCGT
GAAAGAGGTGGCGGAAACGAGGCAACGCGaggtgggtgggaagggggggg
tgaaggaggggctggcgacATTGGAGATGATGTTTGAGGGGACTGGGCTG
AAGGGTGGTGTTGACGTGATGGCTGGAccgccgggagaggagagccTGGA
TCTGAGGTCTTGGGAGAGGGGTGCAGAGGAAGctcgggtggggagggaag
gcgaagcgaggagcgaggaggtggaggacgacgaggacgaggacgagtgG
GACGAGGCCCTGGGAAGCATGGGGGACGCAGATCCTTTGGGGGATCTGGG
CTGGGATGTGGCGGCGCGTTTTGATGTGCTGGtgcgggagctggaggctA
CCGTGGACTCCCCGGACTTGCTGCCCGCCATCGCCAGCCAGTACCACAAC
GTGTTTCTGAGCCGGCACTTCTTGGGCCTGATGCGCGCGAGGCTGGAGGC
GtgcgaggcggcgatggcaggggaggaggacggggagggagtgacggCGG
CGACCCCTGTGGTCTTGGCCAGAATGGTGCGCTTCGCGGAGCAAATGGTG
GTGCAAGTGCAGGAGATGGGGCAGCTGTACGAACTCCAGCAGCTCGACAA
GATCAAGGCGATCTGCGCggtagcggaggaggacatgggccgcctGAGCG
AGTACGTCAGCAGTCGGAAGGAGGATCTGGACGAGGATTTTGTTCGGTAC
TTGCAGTatttgatggaggcggaaaagCTGCGGTTGCGGGGCGCGGGTGT
GACGCGGCCGGAGCGAGAGCCGTCGAACTGGCTGATGATCTTGGAGATCG
TCAAGAAGGGTGTGTACCACGAGCTGGGCAAGGCCGTGCGGGACGACGTG
AGCATGGTGCATTTCATCACTCGCTTCGACGAGGCCGACGAGCGCGAGCA
CCTGACTCGGGCCCACGTTGCGCGCCTGGCGCCCTCCCAAGTCATTCCTT
TCAAGCGTGTGGTCAACCAGATGGTCGATCATTTCGAGAGCCGCGTGAAC
GAGCTGAGCGAGGCGGAGCTATCCCTGGCCGggcgggtgctggaggtgga
ggacgtgctggaggagctccACCCCGACTCCTCCCTGCTGGCCCTCCTGC
agagcaaggaagggggcgtgGGCCTCGAGGCCTACAAGACGGGCGCTGAG
ACGCTGCTACACGACCCGAGGGAGTGGGATGATAGCGCggtggcgggaaa
ggaggacgagcttTTTTCACCGGAATACCTGGCCGCCAAATACGATCGTA
TCCTCAAGCACTACGgattctccgcctcccgccagAGAGGTcggggcatg
ggccagggggacgcggaggaggaggaaagaaaggcagggaTTGGGGATAT
TGAAGGAATTCTGGGGGGAAACGCGGATACGCGGGGTGCGCTGCCTGCTG
CGCTGGAGGCGTGGGTAGGGACAGAAAAGACGGAAAGCGGaccaaaggag
gagaaggaggagcatggagTTTTATCAGTTGGCGCGGCAAGTATCGAGGA
AGCGCTTCGAGAGGAAGGTCTTCTGTAAATACCATAAGCAAACATGTCTG
AGTCAAAAATGATACCATCAAATGGAAATGCAAACTATGCGGACTTTCCT
ACGATTTCTTTCCTCATCGTCGAGCAGATTCACAATTTTTACATTATTTT
CC back to topCoding sequence (CDS) from alignment at CM002457.1:1372607..1375758+ >rna1736 ID=rna1736|Name=rna1736|organism=Nannochloropsis gaditana|type=CDS|length=2922bp|location=Sequence derived from alignment at CM002457.1:1372607..1375758+ (Nannochloropsis gaditana)
ATGGGACGCCCCAGTGCTCGGCATTGCCACATCCTCGTGCCTGCCCTGGC
CAtagtccccttcctccgtgttACGGACGCATTTTTGGTCCCTTCCTCGG
TTGTAACCCGCGTCGCATCACCCCTTTCTAGTACTCCAGCCAGCATTCGA
TTTTCGCAAAATGAGCAGCAGGGGTACTCAAGCCGTCATCCTgtaaaaag
aagaagagagtcTCTCCTTTTCACCCCTCTCACCCTTGCTGCTacaacct
cttcctcatcagcGTCGGTCTCAATTGAAGGACAAAGTCCCATTGTATTT
CGTGCCGATATTGCGGGTATGTCGCGCAAGCAGGCCCTGGCTTGGCTCCA
TGCCTGGTGCACACggtcccttccatcccctccgccatctgcctcttcct
cctcttcttccccggcATCACTCAGCACTCGACCTTACGGAGGGCAAAGC
GGCAGCACTACTGCCTATGCGGCACGCCTTCAGGCCCGTCCCGGACTACC
GGTGGGTGTGACAAGCCTCCCAATATCGCCCACGCTCACCGACCAGGGTG
CCCGCTTGGTCTGTGAGGGCCTGGGCCCGGCATTTTTGGACGTGGAGGTA
TTGGAAAATGGAAGGCAGGCGTCGAAAATATCGCTTGTAGTCCGGCAATG
CATGGGCCAGGCGAAAATGCAGCAGCACTCCCTGTCGATTCGGGGCCTGG
CGCGGGACACGGAGAAGACCGTGCTCGAGAAACTCGAGTCTGACTTGGTG
GTGGCgctgcgagggggggagggcgagggggagggcgtgggtgtAGAGTT
CCGCACAGGATCCGAAGCGGAGGCCATGGAAGGGTTCTTTGAAGCCGTCC
CTGCTTCGTCGGAGGctgtggacgtggacgacgagcacttggaggacaag
ggcctCCGACAGGGGCCAGGggtagagggagaaggacagggcAGCGGCCG
CCAGACCAAGAGCGAAACGGGGCCCGAGGACCGCGTGGAGAAGCCTgata
aggaagaggaggatgcacGTCTGCGGGAGCTCATCGAGACTCtggggctg
gcggaggcccttgacctggaggaaaggggcgagggaggggaaggaggaca
gaaGAACGGGTGGGCGGACCCGAATTCTCCCTTTGCAAAAAAGGCGGTAG
CGGCGTACGAGGCTTTCGTTCAGGCTCAAAAGGGGCCAGGGGCTgaacag
ggaggggatgTTGCCTCGGCAGTGGCGGGGATGGGAGATGTGGTcatgga
ggagctgagggagcgaggggccggaggggggggaacgccCGAAGATGTGA
AAGCCATGTTTGAGAGCGGGCTCAGAAGTGCCAAACAGGAGGCGGATCGG
GTCGCAGCTAAAGGTCAGCGGCAGAAGCAGATGCTTGCGGTCGTGAAAGA
GGTGGCGGAAACGAGGCAACGCGaggtgggtgggaaggggggggtgaagg
aggggctggcgacATTGGAGATGATGTTTGAGGGGACTGGGCTGAAGGGT
GGTGTTGACGTGATGGCTGGAccgccgggagaggagagccTGGATCTGAG
GTCTTGGGAGAGGGGTGCAGAGGAAGctcgggtggggagggaaggcgaag
cgaggagcgaggaggtggaggacgacgaggacgaggacgagtgGGACGAG
GCCCTGGGAAGCATGGGGGACGCAGATCCTTTGGGGGATCTGGGCTGGGA
TGTGGCGGCGCGTTTTGATGTGCTGGtgcgggagctggaggctACCGTGG
ACTCCCCGGACTTGCTGCCCGCCATCGCCAGCCAGTACCACAACGTGTTT
CTGAGCCGGCACTTCTTGGGCCTGATGCGCGCGAGGCTGGAGGCGtgcga
ggcggcgatggcaggggaggaggacggggagggagtgacggCGGCGACCC
CTGTGGTCTTGGCCAGAATGGTGCGCTTCGCGGAGCAAATGGTGGTGCAA
GTGCAGGAGATGGGGCAGCTGTACGAACTCCAGCAGCTCGACAAGATCAA
GGCGATCTGCGCggtagcggaggaggacatgggccgcctGAGCGAGTACG
TCAGCAGTCGGAAGGAGGATCTGGACGAGGATTTTGTTCGGTACTTGCAG
TatttgatggaggcggaaaagCTGCGGTTGCGGGGCGCGGGTGTGACGCG
GCCGGAGCGAGAGCCGTCGAACTGGCTGATGATCTTGGAGATCGTCAAGA
AGGGTGTGTACCACGAGCTGGGCAAGGCCGTGCGGGACGACGTGAGCATG
GTGCATTTCATCACTCGCTTCGACGAGGCCGACGAGCGCGAGCACCTGAC
TCGGGCCCACGTTGCGCGCCTGGCGCCCTCCCAAGTCATTCCTTTCAAGC
GTGTGGTCAACCAGATGGTCGATCATTTCGAGAGCCGCGTGAACGAGCTG
AGCGAGGCGGAGCTATCCCTGGCCGggcgggtgctggaggtggaggacgt
gctggaggagctccACCCCGACTCCTCCCTGCTGGCCCTCCTGCagagca
aggaagggggcgtgGGCCTCGAGGCCTACAAGACGGGCGCTGAGACGCTG
CTACACGACCCGAGGGAGTGGGATGATAGCGCggtggcgggaaaggagga
cgagcttTTTTCACCGGAATACCTGGCCGCCAAATACGATCGTATCCTCA
AGCACTACGgattctccgcctcccgccagAGAGGTcggggcatgggccag
ggggacgcggaggaggaggaaagaaaggcagggaTTGGGGATATTGAAGG
AATTCTGGGGGGAAACGCGGATACGCGGGGTGCGCTGCCTGCTGCGCTGG
AGGCGTGGGTAGGGACAGAAAAGACGGAAAGCGGaccaaaggaggagaag
gaggagcatggagTTTTATCAGTTGGCGCGGCAAGTATCGAGGAAGCGCT
TCGAGAGGAAGGTCTTCTGTAA back to top
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