EWM28949.1, cds1722 (CDS) Nannochloropsis gaditana

Overview
NameEWM28949.1
Unique Namecds1722
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1347779..1348500 -

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Properties
Property NameValue
Start range1347779
Start range.
Protein idEWM28949.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100389g4.6883.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1347779..1348500 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM28949.1 vs. NCBI_GenBank
Match: gi|585111423|gb|EWM28949.1| (hypothetical protein Naga_100389g4, partial [Nannochloropsis gaditana])

HSP 1 Score: 487.263 bits (1253), Expect = 4.588e-174
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0 
Query:    1 MSSSASPQPGSSVLQMSFRNYESCAEGSGGMDVGGGGLSQQKLEEQELDRCTPLLDAVESALDPDSTNEEERHAGKFNLPLGSTARPANASRLHLDASTASLAQPVPTPTGRRSRLLPSAHSSSSSLCSSNPASRQGSRLVVRHARRRGQAKGSRWNVVRVGKGEKLPESVGSLLTDSFNTLLMAPTAYTLAFLASAYLFLVVLFAGIYLLLALEEECNMDIDSFLKGYLFSLETMVGREG 241
            MSSSASPQPGSSVLQMSFRNYESCAEGSGGMDVGGGGLSQQKLEEQELDRCTPLLDAVESALDPDSTNEEERHAGKFNLPLGSTARPANASRLHLDASTASLAQPVPTPTGRRSRLLPSAHSSSSSLCSSNPASRQGSRLVVRHARRRGQAKGSRWNVVRVGKGEKLPESVGSLLTDSFNTLLMAPTAYTLAFLASAYLFLVVLFAGIYLLLALEEECNMDIDSFLKGYLFSLETMVGREG
Sbjct:    1 MSSSASPQPGSSVLQMSFRNYESCAEGSGGMDVGGGGLSQQKLEEQELDRCTPLLDAVESALDPDSTNEEERHAGKFNLPLGSTARPANASRLHLDASTASLAQPVPTPTGRRSRLLPSAHSSSSSLCSSNPASRQGSRLVVRHARRRGQAKGSRWNVVRVGKGEKLPESVGSLLTDSFNTLLMAPTAYTLAFLASAYLFLVVLFAGIYLLLALEEECNMDIDSFLKGYLFSLETMVGREG 241
The following BLAST results are available for this feature:
BLAST of EWM28949.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111423|gb|EWM28949.1|4.588e-174100.00hypothetical protein Naga_100389g4, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1726rna1726Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications