EWM28986.1, cds1688 (CDS) Nannochloropsis gaditana

Overview
NameEWM28986.1
Unique Namecds1688
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1266963..1269395 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28986.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100501g3.4123.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1266963..1269395 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016758transferase activity, transferring hexosyl groups
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002213UDP_glucos_trans
Homology
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|585111481|gb|EWM28986.1| (hypothetical protein Naga_100501g3 [Nannochloropsis gaditana])

HSP 1 Score: 1607.04 bits (4160), Expect = 0.000e+0
Identity = 810/810 (100.00%), Postives = 810/810 (100.00%), Query Frame = 0
Query:    1 MSPSTANRRQHTVIFLALGSLGDVLPVLAVAHRFGRRLDRRGPCPSRRKHLPALVFITHTLYLPRLKTLLERALPRLSQAPVLHIEGIDSPPLPLRRAGPVSVPDELEQCLAASRGHAPIALLACNLVARFGVHIGEILGAASSAVLAPSLPPPTPSPSPTLLRNLLGPKFLRLLEDTGTDRLRYMEYGMLSLFLPAYHAFRERHGLSPCLSSPSAPPAPRTASQAALYALRGNLPFLYGVSEGFFPKPGYWPESSVFCGAWTWAQEEEVGREGGWEGGQEDGEGWVPDEELRRFVEGEGWPPKKKSATEGNVRRVSGGDGKVKVSARTAGSSLPPLICLDMGSMIETELMGREEWEALVEEVLVALKKVFPSSTPAAALSVPASTPFAARRIAFRPPSPSHPSPSTAPWAPLSTPCLLSSLAPPVWPPSPSLNVAREGKAGMSREGRFGHGVKGPSPSGGERGKKRPRRAGRVQGGYAAEEKGEKKGKGCLKEEARGESERERLGEEGKEGEEGQEGKEAVEGLTKEGTKDEEEGRGNAGTTNTFLGEAGFRLLLLHAPDQSCGAGKSRGGNPALPARRQRLEQERKEIPPWLSRRHGGGAKRLVSPKNQDLRLPRQEPLPPHVQAEQSPTSPTSLPPFHHPGSFPSHPYSSPYIFRLPPTTFVPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERNGNSKV 810
            MSPSTANRRQHTVIFLALGSLGDVLPVLAVAHRFGRRLDRRGPCPSRRKHLPALVFITHTLYLPRLKTLLERALPRLSQAPVLHIEGIDSPPLPLRRAGPVSVPDELEQCLAASRGHAPIALLACNLVARFGVHIGEILGAASSAVLAPSLPPPTPSPSPTLLRNLLGPKFLRLLEDTGTDRLRYMEYGMLSLFLPAYHAFRERHGLSPCLSSPSAPPAPRTASQAALYALRGNLPFLYGVSEGFFPKPGYWPESSVFCGAWTWAQEEEVGREGGWEGGQEDGEGWVPDEELRRFVEGEGWPPKKKSATEGNVRRVSGGDGKVKVSARTAGSSLPPLICLDMGSMIETELMGREEWEALVEEVLVALKKVFPSSTPAAALSVPASTPFAARRIAFRPPSPSHPSPSTAPWAPLSTPCLLSSLAPPVWPPSPSLNVAREGKAGMSREGRFGHGVKGPSPSGGERGKKRPRRAGRVQGGYAAEEKGEKKGKGCLKEEARGESERERLGEEGKEGEEGQEGKEAVEGLTKEGTKDEEEGRGNAGTTNTFLGEAGFRLLLLHAPDQSCGAGKSRGGNPALPARRQRLEQERKEIPPWLSRRHGGGAKRLVSPKNQDLRLPRQEPLPPHVQAEQSPTSPTSLPPFHHPGSFPSHPYSSPYIFRLPPTTFVPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERNGNSKV
Sbjct:    1 MSPSTANRRQHTVIFLALGSLGDVLPVLAVAHRFGRRLDRRGPCPSRRKHLPALVFITHTLYLPRLKTLLERALPRLSQAPVLHIEGIDSPPLPLRRAGPVSVPDELEQCLAASRGHAPIALLACNLVARFGVHIGEILGAASSAVLAPSLPPPTPSPSPTLLRNLLGPKFLRLLEDTGTDRLRYMEYGMLSLFLPAYHAFRERHGLSPCLSSPSAPPAPRTASQAALYALRGNLPFLYGVSEGFFPKPGYWPESSVFCGAWTWAQEEEVGREGGWEGGQEDGEGWVPDEELRRFVEGEGWPPKKKSATEGNVRRVSGGDGKVKVSARTAGSSLPPLICLDMGSMIETELMGREEWEALVEEVLVALKKVFPSSTPAAALSVPASTPFAARRIAFRPPSPSHPSPSTAPWAPLSTPCLLSSLAPPVWPPSPSLNVAREGKAGMSREGRFGHGVKGPSPSGGERGKKRPRRAGRVQGGYAAEEKGEKKGKGCLKEEARGESERERLGEEGKEGEEGQEGKEAVEGLTKEGTKDEEEGRGNAGTTNTFLGEAGFRLLLLHAPDQSCGAGKSRGGNPALPARRQRLEQERKEIPPWLSRRHGGGAKRLVSPKNQDLRLPRQEPLPPHVQAEQSPTSPTSLPPFHHPGSFPSHPYSSPYIFRLPPTTFVPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERNGNSKV 810          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|551581935|ref|XP_005776447.1| (hypothetical protein EMIHUDRAFT_54108, partial [Emiliania huxleyi CCMP1516] >gi|551581947|ref|XP_005776453.1| hypothetical protein EMIHUDRAFT_54107, partial [Emiliania huxleyi CCMP1516] >gi|485628551|gb|EOD24018.1| hypothetical protein EMIHUDRAFT_54108, partial [Emiliania huxleyi CCMP1516] >gi|485628557|gb|EOD24024.1| hypothetical protein EMIHUDRAFT_54107, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 67.0106 bits (162), Expect = 9.150e-9
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
Query:  651 YSSPYIFRLPPTTFVPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRGLSREG 733
            Y    +F +PP    PH WLF RC+L +HHGG GT++A +   R GR     P +I P+  +Q + A  V  +G GRG S  G
Sbjct:   98 YVDANVFFVPPAAACPHEWLFRRCKLTVHHGGAGTMVAAV---RAGR-----PTIITPVAFDQHVHARWVSRIGCGRGTSALG 172          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|734390406|gb|KHN26694.1| (Sterol 3-beta-glucosyltransferase [Glycine soja])

HSP 1 Score: 69.3218 bits (168), Expect = 1.086e-8
Identity = 48/142 (33.80%), Postives = 61/142 (42.96%), Query Frame = 0
Query:  665 VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG-RGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERN 805
            VP+ WLFP+C  VIHHGG GT  A L          G PQ++ P   +Q  WA R+  LGV    LSR      +            E  R     ++ AL    + RA      A+  E  L EDGV  A+  L E +  N
Sbjct:  284 VPYGWLFPKCAAVIHHGGSGTTAAALQA--------GTPQVVCPFILDQFYWAERMHWLGVSPEPLSRNHLLPDKNDNTS-----IHEAARVLSLAIHDALSSTVKARA------AEIAERILLEDGVSEAIKYLKEELGLN 406          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|571472024|ref|XP_003532979.2| (PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X3 [Glycine max])

HSP 1 Score: 69.3218 bits (168), Expect = 1.409e-8
Identity = 48/142 (33.80%), Postives = 61/142 (42.96%), Query Frame = 0
Query:  665 VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG-RGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERN 805
            VP+ WLFP+C  VIHHGG GT  A L          G PQ++ P   +Q  WA R+  LGV    LSR      +            E  R     ++ AL    + RA      A+  E  L EDGV  A+  L E +  N
Sbjct:  376 VPYGWLFPKCAAVIHHGGSGTTAAALQA--------GTPQVVCPFILDQFYWAERMHWLGVSPEPLSRNHLLPDKNDNTS-----IHEAARVLSLAIHDALSSTVKARA------AEIAERILLEDGVSEAIKYLKEELGLN 498          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|1084609417|gb|OGO62686.1| (hypothetical protein A2Z45_00585 [Chloroflexi bacterium RBG_19FT_COMBO_55_16])

HSP 1 Score: 63.929 bits (154), Expect = 3.561e-8
Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 0
Query:  657 FRLPPTTF----VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG 726
              LP T +    +PH+WL P C  V+HHGG GT  A L          GVPQL++P   +Q  W  RV+ LGVG
Sbjct:   38 LTLPATVYAAESLPHSWLLPHCAGVVHHGGFGTTAAGLRA--------GVPQLVIPHIADQFYWGQRVDQLGVG 103          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|502086183|ref|XP_004488136.1| (PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2 isoform X1 [Cicer arietinum])

HSP 1 Score: 67.3958 bits (163), Expect = 6.222e-8
Identity = 47/142 (33.10%), Postives = 63/142 (44.37%), Query Frame = 0
Query:  665 VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG-RGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHMERN 805
            +P+ WLFP+C  VIHHGG GT  A L          G PQ++ P   +Q  WA R+  LGV  + LSR      + G     +   RE        ++ AL    + RA      A+  E    EDGV  A+  L E +  N
Sbjct:  382 IPYGWLFPKCAAVIHHGGSGTTAAALQA--------GTPQVVCPFVLDQFYWAERMHWLGVSPKPLSRNHLLPDKNG-----DTSIREAAHVLSLAIHDALSSRIKTRA------AEIAERIYLEDGVSEAIKNLKEELGLN 504          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|1032281277|gb|OAO95605.1| (hypothetical protein AXX17_AT5G24620 [Arabidopsis thaliana])

HSP 1 Score: 63.929 bits (154), Expect = 6.824e-8
Identity = 46/139 (33.09%), Postives = 61/139 (43.88%), Query Frame = 0
Query:  665 VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG-RGLSREGGKGRRGGGRGGREGRGREGGREGGRGVYQALQEMERGRAMCLENVAQYREWFLAEDGVGRAVDLLVEHM 802
            VP+ W+F RC   IHHGG G+V A L          G+PQ+I P   +Q  WA ++  LGV  + L R              E    E  +   + +Y AL    R RAM      +  E    EDGV  AV +L E +
Sbjct:   72 VPYNWMFQRCAAAIHHGGSGSVAAALQA--------GIPQIICPFMLDQFYWAEKMSWLGVAPQPLKRNHLLLEDSND----ETNITEAAQVVAKAIYDALSAKTRARAM------EIAEILSLEDGVTEAVRVLREEV 192          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|518324482|ref|WP_019494689.1| (hypothetical protein, partial [Calothrix sp. PCC 7103])

HSP 1 Score: 62.7734 bits (151), Expect = 9.150e-8
Identity = 32/73 (43.84%), Postives = 39/73 (53.42%), Query Frame = 0
Query:  658 RLPPTTF----VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVG 726
             LP T +    VPH+WLFPR   V+HHGG GT  A +          GVP +I+P   +Q  W  RV  LGVG
Sbjct:   37 NLPDTVYLIDSVPHSWLFPRVAAVVHHGGAGTTAAGMRA--------GVPSIIIPFFGDQFFWGQRVAKLGVG 101          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|1079483801|ref|WP_070193152.1| (glycosyltransferase [Humibacillus sp. DSM 29435] >gi|1078767569|gb|OFE15422.1| hypothetical protein BA895_06860 [Humibacillus sp. DSM 29435])

HSP 1 Score: 66.2402 bits (160), Expect = 1.117e-7
Identity = 34/69 (49.28%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  665 VPHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGVGRG-LSRE 732
            VPH WLFPRC +V+HHGG GT  A L          G PQ++VP   +Q  W  RV  LGVG   LSR+
Sbjct:  333 VPHDWLFPRCVVVVHHGGAGTTAAALRA--------GAPQVVVPHIADQPYWGRRVSELGVGSAPLSRK 393          
BLAST of EWM28986.1 vs. NCBI_GenBank
Match: gi|981741606|ref|WP_059934949.1| (glycosyltransferase [Burkholderia ubonensis] >gi|978578342|gb|KVO73363.1| glycosyl transferase [Burkholderia ubonensis])

HSP 1 Score: 65.4698 bits (158), Expect = 1.773e-7
Identity = 48/132 (36.36%), Postives = 64/132 (48.48%), Query Frame = 0
Query:  651 YSSPYIFRLPPTTFV----PHTWLFPRCRLVIHHGGLGTVMACLMGRRRGREGNGVPQLIVPITKEQEMWAMRVEHLGV------GRGL-SREGGKGRRGGGRGGREGRGREGGREGGR--GVYQALQEMER 769
            +S    F LP   FV    PH WLFPR  +VIHHGG GT  +            GVP ++VP   +Q  WA R++ LGV      GR L + E  +G     RG  + R  E GR   +  G+ +A+  +ER
Sbjct:  283 WSGIDTFALPKHVFVVGDTPHRWLFPRTSMVIHHGGSGTTHSAARA--------GVPSVVVPFAGDQFFWANRLQRLGVAGAPVAGRRLRAAELARGIAFAQRGDVKARAAELGRRIAQEHGLRRAVAAIER 406          
The following BLAST results are available for this feature:
BLAST of EWM28986.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111481|gb|EWM28986.1|0.000e+0100.00hypothetical protein Naga_100501g3 [Nannochloropsi... [more]
gi|551581935|ref|XP_005776447.1|9.150e-940.96hypothetical protein EMIHUDRAFT_54108, partial [Em... [more]
gi|734390406|gb|KHN26694.1|1.086e-833.80Sterol 3-beta-glucosyltransferase [Glycine soja][more]
gi|571472024|ref|XP_003532979.2|1.409e-833.80PREDICTED: sterol 3-beta-glucosyltransferase UGT80... [more]
gi|1084609417|gb|OGO62686.1|3.561e-843.24hypothetical protein A2Z45_00585 [Chloroflexi bact... [more]
gi|502086183|ref|XP_004488136.1|6.222e-833.10PREDICTED: sterol 3-beta-glucosyltransferase UGT80... [more]
gi|1032281277|gb|OAO95605.1|6.824e-833.09hypothetical protein AXX17_AT5G24620 [Arabidopsis ... [more]
gi|518324482|ref|WP_019494689.1|9.150e-843.84hypothetical protein, partial [Calothrix sp. PCC 7... [more]
gi|1079483801|ref|WP_070193152.1|1.117e-749.28glycosyltransferase [Humibacillus sp. DSM 29435] >... [more]
gi|981741606|ref|WP_059934949.1|1.773e-736.36glycosyltransferase [Burkholderia ubonensis] >gi|9... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1692rna1692Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications