EWM28996.1, cds1674 (CDS) Nannochloropsis gaditana

Overview
NameEWM28996.1
Unique Namecds1674
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1244016..1244159 -
Alignment locationCM002457.1:1243217..1243876 -

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Properties
Property NameValue
Protein idEWM28996.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100373g8.5922.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1244016..1244159 -
CM002457.1supercontigCM002457.1:1243217..1243876 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM28996.1 vs. NCBI_GenBank
Match: gi|585111495|gb|EWM28996.1| (hypothetical protein Naga_100373g8 [Nannochloropsis gaditana] >gi|585111496|gb|EWM28997.1| hypothetical protein Naga_100373g8 [Nannochloropsis gaditana])

HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 
Query:    1 MPQTSDEDQVADDAALLGPTQLSGKHFTKEGPQSPRPLPCAWTSQRRQRRFACVIYTASTLVVMILLALIPDRTFFHERRQLWGRLCLSVAAALVMFVGVQCSNPGYVERGALTEVHGQGPDKPAKLLEEGACHTKKSEVEGSGAQYEEKQPMMTLQDMGPTGKVMERPPGIKGTHTQTGMGRQCGNGNKSGREEGSEEDEMDRREGDGDGRDGMASPSRTSGSDSAWPREDKERRRRQHFISRGWCRWCEMRKVRKAGEKPKVPFR 267
            MPQTSDEDQVADDAALLGPTQLSGKHFTKEGPQSPRPLPCAWTSQRRQRRFACVIYTASTLVVMILLALIPDRTFFHERRQLWGRLCLSVAAALVMFVGVQCSNPGYVERGALTEVHGQGPDKPAKLLEEGACHTKKSEVEGSGAQYEEKQPMMTLQDMGPTGKVMERPPGIKGTHTQTGMGRQCGNGNKSGREEGSEEDEMDRREGDGDGRDGMASPSRTSGSDSAWPREDKERRRRQHFISRGWCRWCEMRKVRKAGEKPKVPFR
Sbjct:    1 MPQTSDEDQVADDAALLGPTQLSGKHFTKEGPQSPRPLPCAWTSQRRQRRFACVIYTASTLVVMILLALIPDRTFFHERRQLWGRLCLSVAAALVMFVGVQCSNPGYVERGALTEVHGQGPDKPAKLLEEGACHTKKSEVEGSGAQYEEKQPMMTLQDMGPTGKVMERPPGIKGTHTQTGMGRQCGNGNKSGREEGSEEDEMDRREGDGDGRDGMASPSRTSGSDSAWPREDKERRRRQHFISRGWCRWCEMRKVRKAGEKPKVPFR 267
The following BLAST results are available for this feature:
BLAST of EWM28996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111495|gb|EWM28996.1|0.000e+0100.00hypothetical protein Naga_100373g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1678rna1678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications