rna1675, rna1675 (mRNA) Nannochloropsis gaditana

Overview
Namerna1675
Unique Namerna1675
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length942
Alignment locationCM002457.1:1237204..1237850 -

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Properties
Property NameValue
Productputative serine threonine-protein kinase wnk11
Orig transcript idgnl|cribi|Naga_101852g1.1264.mrna
Orig protein idgnl|cribi|Naga_101852g1.1264
GenePK
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1237204..1237850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PKgene1613Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1675rna1675-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29002.1cds1671Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1675 ID=rna1675|Name=rna1675|organism=Nannochloropsis gaditana|type=mRNA|length=942bp
ATGGTGTCGGAACTGAACATCTCCTCGAGTGAGATGGAAAGCCTCGCGGC
GCAAATCTCCAGCTTGCAGGAGGAAATGTTGGCAAGGAGGAAGGAGAAGA
AAGAAGGGAGGGAGCGGCGGAAACGACGCCGACGCCGACGGTCCTCCACC
ACCGAGGAGGGCGGGAACGAGGACACGGAGGAAGGCGGGAGGCAGGAGGC
CCCCCCCCCTGCCAGCACCGGCTCCCCCTCCCTCCCAGCTTCCCACTCCA
CCTCGACCCGGTCTCCTCTGGGCGGCACCTCCCGTTCGTCCTCCCTCGCG
CCTGCCTCCTCCCCTACCCCCGTCACCCACCATCCCCGCTATCTGCACCC
CCCTTCCACCCTATCGTCCTCCTCCCACCCTTCCCCCCTGCCCTCGAACG
CCTCCTCCTTCCTTCCTCCGTCCGAGGCCGGAGACGCCCTCTCGCTCTCG
CGCTCGACCCCGTTGGGCACCTCCACCTCCTCCTCCATTGCGTCCTCCAT
CCCTTCCTCCCTGCCTTCCTACCACACCCGTTCGGATATGCCGCGCCCTG
CCTCCTACGAGCACATCCTGCACCAGAAGCAGCAGGGTGGGGAAGGGGGG
GAGGAAGGGAAGGAGGACGGGGACAAGGGAAGGGAGGGCCCAGCGACGAG
CCTGGAGAAGCTGCTTTTGACGGATATAGACTACCAAGACAGCGATTTTG
AAGAGGAAGATTCTGCGGACCAGGAATTGCAGCGTCTGCGCCAAGAGTAT
ATCAAGAGCGTGCAACGGGCGCAGAAGGCATTCAAAGCGCGGATGGAATC
CATGTACAAATGTCGGCAAGATAAGGAGGACTGGCATCTGAAGCTTCTGG
AACAACATCAGAAGGCGATGGCGGACTTTGATCGACGCTTGCTGTTGGCC
ACAGACGATCAGGCGAAGAGGCTGCCGATTGTTTCACCTTAG
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protein sequence of rna1675

>rna1675-protein ID=rna1675-protein|Name=rna1675|organism=Nannochloropsis gaditana|type=polypeptide|length=160bp
MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFI
DVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPEEGGKDGGEG
EEKGKISGGRGGGGEGGRAGGREGGRLGERQTSTDSAGIERKQVAFKVFF
GALQLVYRSQ
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mRNA from alignment at CM002457.1:1237204..1237850-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1675 ID=rna1675|Name=rna1675|organism=Nannochloropsis gaditana|type=mRNA|length=647bp|location=Sequence derived from alignment at CM002457.1:1237204..1237850- (Nannochloropsis gaditana)
ATGAGCATCCTGCAGATGCTGACCAAGGAGGCTCCCTACAAGGAATGCGA
GGCTTTGGGCGGGGTGGGCGCCATTTATCAACGCGTGACGCAGCACGTCC
CCCCTGCCTCGCTGCACACGATTGCCCTCCCCTCGGCCCGGGCTTTTATC
GACGTTTGCTTGGACCCAAACCCGGCGCTGCGCCCGTCGGCCGCCGAGTT
ATTGGAGCACGTGTTTTTGAAGGAGGACAAGGAAGTGGACGCGCTGGATG
TGGTGTTGACGGCGGCGCCGGAGGAGGGAGGGAAGGACGGGGGGGAGGGA
GAGGAAAAGGGGAAGGTGAGCCAGGCGGGGGCCAGGGAGGCACTGGGAAG
GCAGGAGAGTGACGGGGAAGGGGAGCAAGGGGAGGAGGGCGGGGCTGAGG
GCGGGAAGGAAGCGCCGCCGGTGGCATCGGGCGGAACGAAGGGGGTGGAG
GGGGAGACTTTGGATGCCAGCCTACCCAGATCTCAGGAGGGCGGGGGGGA
GGGGGAGAGGGAGGGCGGGCGGGAGGGAGGGAAGGAGGGAGGCTTGGTGA
GCGGCAAACCTCCACCGACAGTGCAGGTATCGAACGGAAGCAAGTTGCAT
TTAAGGTTTTTTTCGGAGCCCTACAGCTCGTATACAGAAGTCAGTAG
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Coding sequence (CDS) from alignment at CM002457.1:1237204..1237850-

>rna1675 ID=rna1675|Name=rna1675|organism=Nannochloropsis gaditana|type=CDS|length=966bp|location=Sequence derived from alignment at CM002457.1:1237204..1237850- (Nannochloropsis gaditana)
ATCTCAGGAGGGCGGGGGGGAGGGGGAGAGGGAGGGCGGGCGGGAGGGAG
GGAAGGAGGGAGGCTTGGTGAGCGGCAAACCTCCACCGACAGTGCAGGTA
TCGAACGGAAGCAAGTTGCATTTAAGGTTTTTTTCGGAGCCCTACAGCTC
GTATACAGAAGTCAGTAGATGAGCATCCTGCAGATGCTGACCAAGGAGGC
TCCCTACAAGGAATGCGAGGCTTTGGGCGGGGTGGGCGCCATTTATCAAC
GCGTGACGCAGCACGTCCCCCCTGCCTCGCTGCACACGATTGCCCTCCCC
TCGGCCCGGGCTTTTATCGACGTTTGCTTGGACCCAAACCCGGCGCTGCG
CCCGTCGGCCGCCGAGTTATTGGAGCACGTGTTTTTGAAGGAGGACAAGG
AAGTGGACGCGCTGGATGTGGTGTTGACGGCGGCGCCGGAGGAGGGAGGG
AAGGACGGGGGGGAGGGAGAGGAAAAGGGGAAGATCTCAGGAGGGCGGGG
GGGAGGGGGAGAGGGAGGGCGGGCGGGAGGGAGGGAAGGAGGGAGGCTTG
GTGAGCGGCAAACCTCCACCGACAGTGCAGGTATCGAACGGAAGCAAGTT
GCATTTAAGGTTTTTTTCGGAGCCCTACAGCTCGTATACAGAAGTCAGTA
GATGAGCATCCTGCAGATGCTGACCAAGGAGGCTCCCTACAAGGAATGCG
AGGCTTTGGGCGGGGTGGGCGCCATTTATCAACGCGTGACGCAGCACGTC
CCCCCTGCCTCGCTGCACACGATTGCCCTCCCCTCGGCCCGGGCTTTTAT
CGACGTTTGCTTGGACCCAAACCCGGCGCTGCGCCCGTCGGCCGCCGAGT
TATTGGAGCACGTGTTTTTGAAGGAGGACAAGGAAGTGGACGCGCTGGAT
GTGGTGTTGACGGCGGCGCCGGAGGAGGGAGGGAAGGACGGGGGGGAGGG
AGAGGAAAAGGGGAAG
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Synonyms
Publications