EWM29002.1, cds1671 (CDS) Nannochloropsis gaditana

Overview
NameEWM29002.1
Unique Namecds1671
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1237536..1237850 -
Alignment locationCM002457.1:1237204..1237371 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29002.1
Productputative serine threonine-protein kinase wnk11
Orig transcript idgnl|cribi|Naga_101852g1.1264.mrna
GenePK
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1237536..1237850 -
CM002457.1supercontigCM002457.1:1237204..1237371 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|585111502|gb|EWM29002.1| (putative serine threonine-protein kinase wnk11 [Nannochloropsis gaditana])

HSP 1 Score: 320.087 bits (819), Expect = 1.556e-110
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPEEGGKDGGEGEEKGKISGGRGGGGEGGRAGGREGGRLGERQTSTDSAGIERKQVAFKVFFGALQLVYRSQ 160
            MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPEEGGKDGGEGEEKGKISGGRGGGGEGGRAGGREGGRLGERQTSTDSAGIERKQVAFKVFFGALQLVYRSQ
Sbjct:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPEEGGKDGGEGEEKGKISGGRGGGGEGGRAGGREGGRLGERQTSTDSAGIERKQVAFKVFFGALQLVYRSQ 160          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|528892790|gb|EPZ33136.1| (Protein kinase, catalytic domain-containing protein [Rozella allomycis CSF55])

HSP 1 Score: 75.485 bits (184), Expect = 6.328e-13
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPEEGGKD 96
            M +L+M+T+E PY EC        I+++VTQ + PA+L +I     R FI++C+D NP  RPS+ ELLEH FL+ ++   A+   L    E G ++
Sbjct:  215 MCVLEMVTREYPYSECT---NPAQIFRKVTQGIKPAALGSIEDEEIRKFIEMCIDHNPETRPSSDELLEHPFLRIEESSPAVVGALVDMEEVGERE 307          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|569423778|gb|ETO30097.1| (hypothetical protein RFI_07027 [Reticulomyxa filosa])

HSP 1 Score: 75.0998 bits (183), Expect = 8.837e-13
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFL 73
            M IL+++T   PY+EC +     A+YQ+VTQ   PA LH I   S R FI +CL+ +P LRPSA ELL+H FL
Sbjct:  105 MCILELMTGRIPYEECRS---APAVYQKVTQGKKPAILHQIQDLSLRGFIAICLEHDPRLRPSAKELLDHPFL 174          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|909145001|gb|KNE68866.1| (WNK protein kinase [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 72.7886 bits (177), Expect = 5.245e-12
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKED 76
            M +L+++TKE PY+EC        IY+RV+  + P +L+ +A P  R FI++C+  +  LRPSA ELLEH FL  D
Sbjct:  280 MCVLELVTKEYPYQECH---NQAQIYKRVSAGIKPLALNKVADPDTREFIEICIQHDYRLRPSAVELLEHPFLATD 352          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|1001617933|gb|KXS21672.1| (kinase-like protein [Gonapodya prolifera JEL478])

HSP 1 Score: 72.7886 bits (177), Expect = 5.560e-12
Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKE 78
            + +L+M+TKE PY EC        I++RVTQ + P +L  +   + R FID+C++ +P  RPSA++LL+H FL+++ E
Sbjct:  235 LCVLEMVTKEYPYGEC---TNQAQIFKRVTQGIKPQALSKVMDEATREFIDICINHDPTRRPSASDLLQHPFLQDEPE 309          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|569377970|gb|ETO13950.1| (WNK protein kinase [Reticulomyxa filosa])

HSP 1 Score: 71.2478 bits (173), Expect = 7.015e-12
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFL 73
            M IL+++T   PY+EC +     A+YQ+VTQ   P+ L+ I   S R FI +CL+ +P LRPSA ELLEH FL
Sbjct:   40 MCILELVTGRIPYEECRS---APAVYQKVTQGKKPSILNQIPDKSLRGFIAICLEHDPRLRPSATELLEHPFL 109          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|909145716|gb|KNE69394.1| (WNK protein kinase [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 72.0182 bits (175), Expect = 9.258e-12
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKED 76
            M +L+++TKE PY+EC        IY+RV+  + P +L+ +  P  R FI++C+  +  LRPSAAELLEH FL  D
Sbjct:  279 MCVLELVTKEYPYQECH---NQAQIYKRVSAGIKPLALNKVTDPDTREFIELCIQHDYRLRPSAAELLEHPFLAAD 351          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|569428769|gb|ETO32306.1| (ATP binding protein, partial [Reticulomyxa filosa])

HSP 1 Score: 70.8626 bits (172), Expect = 1.771e-11
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDKEVDALDVVLTAAPE 91
            M IL+++T   PY+EC +     A+YQ+VTQ   P  L+ I   S R FI +CL+ +P LRPSAAELL+H FL   +  D   + LT  P+
Sbjct:  187 MCILELVTGRIPYEECRS---APAVYQKVTQGKKPLVLYQIQDLSLRGFIAICLEHDPRLRPSAAELLDHPFL-WPRTSDTNTIKLTTRPQ 273          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|1183361561|gb|ORX88765.1| (kinase-like protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 70.4774 bits (171), Expect = 2.961e-11
Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKEDK----EVDALDVVLTAAP 90
            M +L+MLT E PY EC+       IY++VT+ + PASL  I  P    FI +C+  +P+ RPSAA LL H FL  D     E  AL    +AAP
Sbjct:  219 MCVLEMLTYEYPYSECQ---NPAQIYRKVTRGIGPASLQRITDPDILQFIQLCIQHDPSRRPSAAHLLNHPFLMLDSGSNIESTALPSSGSAAP 309          
BLAST of EWM29002.1 vs. NCBI_GenBank
Match: gi|1183362638|gb|ORX89588.1| (kinase-like protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 70.4774 bits (171), Expect = 3.303e-11
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 MSILQMLTKEAPYKECEALGGVGAIYQRVTQHVPPASLHTIALPSARAFIDVCLDPNPALRPSAAELLEHVFLKED 76
            M +L+MLT+E PY EC+       IY++VTQ + PASL  I  P    FI++C+  +P  RPSAA+LL H FL  D
Sbjct:  222 MCVLEMLTREYPYSECQ---NPAQIYRKVTQGIRPASLQRITDPDILQFIELCIQYDPNRRPSAAQLLCHPFLALD 294          
The following BLAST results are available for this feature:
BLAST of EWM29002.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111502|gb|EWM29002.1|1.556e-110100.00putative serine threonine-protein kinase wnk11 [Na... [more]
gi|528892790|gb|EPZ33136.1|6.328e-1339.58Protein kinase, catalytic domain-containing protei... [more]
gi|569423778|gb|ETO30097.1|8.837e-1350.68hypothetical protein RFI_07027 [Reticulomyxa filos... [more]
gi|909145001|gb|KNE68866.1|5.245e-1244.74WNK protein kinase [Allomyces macrogynus ATCC 3832... [more]
gi|1001617933|gb|KXS21672.1|5.560e-1241.03kinase-like protein [Gonapodya prolifera JEL478][more]
gi|569377970|gb|ETO13950.1|7.015e-1249.32WNK protein kinase [Reticulomyxa filosa][more]
gi|909145716|gb|KNE69394.1|9.258e-1244.74WNK protein kinase [Allomyces macrogynus ATCC 3832... [more]
gi|569428769|gb|ETO32306.1|1.771e-1143.96ATP binding protein, partial [Reticulomyxa filosa][more]
gi|1183361561|gb|ORX88765.1|2.961e-1143.62kinase-like protein [Basidiobolus meristosporus CB... [more]
gi|1183362638|gb|ORX89588.1|3.303e-1147.37kinase-like protein [Basidiobolus meristosporus CB... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1675rna1675Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications