rna1661, rna1661 (mRNA) Nannochloropsis gaditana

Overview
Namerna1661
Unique Namerna1661
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length987
Alignment locationCM002457.1:1190603..1191545 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101050g1.8459.mrna
Orig protein idgnl|cribi|Naga_101050g1.8459
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1190603..1191545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101050g1gene1599Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29018.1cds1657Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1661rna1661-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1661 ID=rna1661|Name=rna1661|organism=Nannochloropsis gaditana|type=mRNA|length=987bp
TGCTGCCAAAACGGACCTGTCCCTGCATGCCGCTTGAATTTTTTATTTGC
ACATGTAGCTTTGTTGCGTGATACTGTCTAGGCCTATGTTATACGAGGCC
GTGAGTCGGTATGGTATCGGCGTGAGCACGAGGGAGCTTTGTAAGAGGTT
GGCGACAGGGTCTGGTTACTGTGCGAGGAGAGCACATCCTAAGGAGAAAA
CTTTGACACAGGCATCATGAAACCCATAAGCCCCTTGCAAGGTGATCGCA
TTCAATGTGTCCATTCATTCACGTTCATCCATTTGCAATAGGCAGAGCCC
AAATTTTGTCAGCAAGTCAAACTTGGGAGCGCCCTCGACGTGCGCCGCCC
CCCCCCGCCGCATCCTTCCTCCCGTCCCAGAGGCCACAAAATCCATGTCT
ACGAGCAAAGCAGCGACTTCCGCTGCCTCTGCCATCTTCACCCGTGTCAG
TTCCACGGTAAAAGATGCGGCTTTGGAGGCCGCCAAGAAGGCTCGACCTC
AATGGCATCTGATTGACGCCAAAGACCAGGTCGTCGGGCGACTGGCAAGT
CAAATAGCCTCCATCATCCGCGGGCGCCACAAGCCTTTCTACTGCCCCAA
TGCAGACTGCGGGGACTACGTGGTGGTGGTCAATGCCCGGCACGTGACTT
TGACCGGCCGGAAAATGAAGGACAAGAAGTACTACTGGCACACCATGCAC
CCAGGCGGCTTGAAGAGTAGGACTCCAGAGCAGTTGATAGAGAGGGGCCA
AGCGGAGGAAATTTTGCGCCACGCGGTTCTGGGCATGTTGCCGAAGAACA
AGCTGAGGAACCACGCCATAAAAAAACTCAGGGTCTTTCCCGAGAAGTAC
CATATTTATGAGGAGCAATTGCGTGGAAAGCAGTCGCTTTTGTAAACCAC
ATCAAAGATTAAAAAAGGATAGAGAAGCATTGAGCGCTTGACGGAAATGA
ACCGCGTGTCGCACGCCCTCCTACGCGCGCCAGATCC
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protein sequence of rna1661

>rna1661-protein ID=rna1661-protein|Name=rna1661|organism=Nannochloropsis gaditana|type=polypeptide|length=274bp
MLNGALQADRPSLRTAWEEEVRAAKTLAGFALCLYAFLRRARALLPEIKR
RVKGIRQQEIAAKHSILANVEAGAVNLPTRETATVVWARLPRGPYWPALA
HLPHHAGLRKLLKGMGHRMIRFIGEVGVYHLRTEMPLLPGLPPPATGGNA
PSVLPFVDGEGRSSVDVLKKGRSLAKSLKVAWQLHEKFTQEGRKEEEEEE
VGPGGVEEWLMDLEDEEVSSDEATESEEEKGRGWGGGNGRGKRRLRSTGK
GESGASGSEQGGRREGRRSRRRRS
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mRNA from alignment at CM002457.1:1190603..1191545-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1661 ID=rna1661|Name=rna1661|organism=Nannochloropsis gaditana|type=mRNA|length=943bp|location=Sequence derived from alignment at CM002457.1:1190603..1191545- (Nannochloropsis gaditana)
CCGACGTCGGAACCGGAAAGACGGGGACCGGTACGAGACGGACGAGGAGG
ACTATGAGGTGGAAAGAAAACCCCGACCGAAAACCCCCGAGGCCCTGGCG
GCCGACCGGGAGCTGGCCATGCTGAACGGGGCCCTACAGGCGGACCGCCC
CTCGTTGCGGACGGCCTGGGAGGAGGAGGTTCGGGCTGCCAAGACCCTGG
CGGGCTTCGCCCTCTGCCTCTACGCGTTTTTGCGGCGGGCCCGGGCCCTC
CTCCCTGAGATCAAGCGCCGGGTGAAAGGGATTCGGCAGCAGGAAATCGC
GGCCAAGCACAGCATTCTCGCTAACGTGGAGGCAGGGGCGGTCAACCTCC
CCACCCGGGAGACGGCGACGGTGGTATGGGCCCGCCTGCCCCGTGGTCCC
TATTGGCCCGCCTTGGCGCACCTTCCCCACCACGCGGGCTTGCGGAAATT
GTTGAAAGGGATGGGGCATCGGATGATTCGTTTCATTGGGGAGGTGGGAG
TCTACCATTTGCGGACGGAAATGCCACTGTTGCCTGGGTTGCCCCCTCCT
GCCACGGGGGGGAACGCGCCGAGCGTCTTGCCCTTCGTTGATGGGGAGGG
AAGGAGCAGTGTGGACGTGTTGAAGAAAGGGCGGTCTCTGGCCAAGTCCC
TTAAGGTGGCGTGGCAGCTGCACGAGAAATTCACGCAAGAGGGACGGAAG
GAGGAGGAGGAGGAGGAGGTGGGGCCCGGGGGGGTGGAGGAGTGGTTGAT
GGATTTGGAAGACGAAGAAGTATCTTCGGACGAGGCGACCGAGTCCGAGG
AGGAGAAGGGAAGGGGCTGGGGGGGAGGCAATGGGAGAGGGAAGCGACGG
CTGCGGTCGACGGGGAAAGGGGAGTCAGGCGCGTCAGGGTCGGAGCAAGG
GGGAAGGCGAGAGGGGAGGAGGAGCCGGCGACGTCGGTCCTGA
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Coding sequence (CDS) from alignment at CM002457.1:1190603..1191545-

>rna1661 ID=rna1661|Name=rna1661|organism=Nannochloropsis gaditana|type=CDS|length=825bp|location=Sequence derived from alignment at CM002457.1:1190603..1191545- (Nannochloropsis gaditana)
ATGCTGAACGGGGCCCTACAGGCGGACCGCCCCTCGTTGCGGACGGCCTG
GGAGGAGGAGGTTCGGGCTGCCAAGACCCTGGCGGGCTTCGCCCTCTGCC
TCTACGCGTTTTTGCGGCGGGCCCGGGCCCTCCTCCCTGAGATCAAGCGC
CGGGTGAAAGGGATTCGGCAGCAGGAAATCGCGGCCAAGCACAGCATTCT
CGCTAACGTGGAGGCAGGGGCGGTCAACCTCCCCACCCGGGAGACGGCGA
CGGTGGTATGGGCCCGCCTGCCCCGTGGTCCCTATTGGCCCGCCTTGGCG
CACCTTCCCCACCACGCGGGCTTGCGGAAATTGTTGAAAGGGATGGGGCA
TCGGATGATTCGTTTCATTGGGGAGGTGGGAGTCTACCATTTGCGGACGG
AAATGCCACTGTTGCCTGGGTTGCCCCCTCCTGCCACGGGGGGGAACGCG
CCGAGCGTCTTGCCCTTCGTTGATGGGGAGGGAAGGAGCAGTGTGGACGT
GTTGAAGAAAGGGCGGTCTCTGGCCAAGTCCCTTAAGGTGGCGTGGCAGC
TGCACGAGAAATTCACGCAAGAGGGACGGAAGGAGGAGGAGGAGGAGGAG
GTGGGGCCCGGGGGGGTGGAGGAGTGGTTGATGGATTTGGAAGACGAAGA
AGTATCTTCGGACGAGGCGACCGAGTCCGAGGAGGAGAAGGGAAGGGGCT
GGGGGGGAGGCAATGGGAGAGGGAAGCGACGGCTGCGGTCGACGGGGAAA
GGGGAGTCAGGCGCGTCAGGGTCGGAGCAAGGGGGAAGGCGAGAGGGGAG
GAGGAGCCGGCGACGTCGGTCCTGA
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Synonyms
Publications