EWM29042.1, cds1634 (CDS) Nannochloropsis gaditana

Overview
NameEWM29042.1
Unique Namecds1634
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1129632..1129672 +
Alignment locationCM002457.1:1129805..1129855 +
Alignment locationCM002457.1:1130181..1130269 +
Alignment locationCM002457.1:1130498..1130620 +
Alignment locationCM002457.1:1130674..1130706 +
Alignment locationCM002457.1:1130748..1130941 +

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Properties
Property NameValue
Protein idEWM29042.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100071g7.7960.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1129632..1129672 +
CM002457.1supercontigCM002457.1:1129805..1129855 +
CM002457.1supercontigCM002457.1:1130181..1130269 +
CM002457.1supercontigCM002457.1:1130498..1130620 +
CM002457.1supercontigCM002457.1:1130674..1130706 +
CM002457.1supercontigCM002457.1:1130748..1130941 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM29042.1 vs. NCBI_GenBank
Match: gi|585111560|gb|EWM29042.1| (hypothetical protein Naga_100071g7 [Nannochloropsis gaditana])

HSP 1 Score: 362.459 bits (929), Expect = 6.528e-127
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 
Query:    1 MFLRWHCAQKLFLCLNISSTMIANTVRQFARVQQLRTLSTSVPSGVRYGKSFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIQSLIYGVERNYRARRQEVGISGLSGVILMKILRAKNFRQSQSYAMRWTACYGNSSRSGLTGYWGYGICNAMACFF 176
            MFLRWHCAQKLFLCLNISSTMIANTVRQFARVQQLRTLSTSVPSGVRYGKSFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIQSLIYGVERNYRARRQEVGISGLSGVILMKILRAKNFRQSQSYAMRWTACYGNSSRSGLTGYWGYGICNAMACFF
Sbjct:    1 MFLRWHCAQKLFLCLNISSTMIANTVRQFARVQQLRTLSTSVPSGVRYGKSFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIQSLIYGVERNYRARRQEVGISGLSGVILMKILRAKNFRQSQSYAMRWTACYGNSSRSGLTGYWGYGICNAMACFF 176
The following BLAST results are available for this feature:
BLAST of EWM29042.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111560|gb|EWM29042.1|6.528e-127100.00hypothetical protein Naga_100071g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1638rna1638Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications