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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100071g7.7960.mrna |
| Orig protein id | gnl|cribi|Naga_100071g7.7960 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1129632..1130941 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1638 ID=rna1638|Name=rna1638|organism=Nannochloropsis gaditana|type=mRNA|length=2602bp
AAGAACATGGCTTGTTAAAGGTGATAGTCGGATTGCGTGTCTGATTGTTG
TTATTTTTTCTTACCACAGTCGGTGACGGCAGCTGGTTGGTACGCGGCTG
CGTGCGAATGGGTGGGTAAGGAGGGATCGACGACCTCCTCTACACACAGG
CAGGGGAACGCAGCTCCAGAAGGCTTCAACACCGTGATGGCGACAGGGCC
GCCAATACAACTCGCGTTCCCGTCACATGCATTTCAGTACACGCCACTCG
TGAGGGTACGGTGGCAAAAACGGCGGAGGAGAAGAGTCTGTGTCCATGCG
CCCTTTCGGCCTGGATGTTGTCGGACCCTTCCTCTCTTGATCTCCGTCCT
TTTCCTTCTGCTATTGTTTGCGCATTGCACCCAAGCCTTCGTGCTGGCTC
CACCTGGTGTGGATCGACGGATAGTCGGAGGGAGGAAAAGGCTGGAAGAT
TGCAGAAGAAGACCGCCATCCTTTGTGGGCACGAGGGAGGGCATATGTGC
CTTGGGCAGCGCGCTAGCCGATCGTCAGCAAGCGAGCAGCAACAGCAACG
GCAACAGCATCAGCTTCAGCAACAGCAACAACAACAGCAACTTTTCCGCC
AGCACCCCGGGCAGGCCGTCCGTGCCTTTGGTTCCGACGCGACTGGTATC
CACCAGCTTCCAACCCCCTATCCAGCAGGACATCGCCCCGGGTTCCCCGG
GCGTGGCCGAGGCCCGTTTTGTCGCCGAGTGCGACATGCCAACCGACCGA
GGCAATTTTAGGATGCGGTCCTACCGATGCGACGGCGATTACGCGGCCCT
GGAGCCGGTAGCCTTGACGCATGGGCCGTTGGGAGGGGCGGAGAACGTGT
TGGCCCGCGTGCATGACCAATGCCTCACGTCCGAAGTCTTTGGGAGCAAG
CGCTGCGATTGCAAAGAGCAGTTGGGAATGGCCTTGGACATGATTAGGGA
GGAAGGGGGCGTGGTGATCTATCTCCAGCAGGAGGGGCGCGGGATCGGGC
TCGCCAACAAAGTGGCCGCCTACGCCCTCCAAGACGAGGGTCTCGACACG
GTGGATGCCAACCGGCACCTGGGTTTCGGCGACGACGAGCGCACCTACGA
CATCGTGCCTTCCATTCTCCGGGACCTGGGCGTCGAGTCTATCCAGCTCA
TGACCAACAACCCCCTCAAACTGGAGTGCCTGCTCAAGCTGGGAGTTCGC
GTCTCCAAGGTGGTGCCCATCGTCGTCGCCCCCAACGTCTTCAATGAGCG
GTACCTCATCACCAAAGCAGAGCGCATGGCCCATACCCTCTCCCCCGCCC
TCGCCCTACAACGCTCCCTGGTCGTGCCCCCTGCCCCTGCTACCGCCGGC
ATGCGGGGAGGAGATTCGGGAGAGAAGCAAGAGAAAGCCGATATCTCACG
GGAAATCCTCTTGTCGCGGAAGAGGAAAGGGGTTCGGACGTGGAAAGGCG
TGCGGCAGCCGGAGGAGGGGGAGGCAACCGGAAGGAAGGAGGTGGGGCCA
GGCAGGACGGACGCCGGAGTCTCGTCAGGGGGCAGGGAGGACGCAGGGTT
GGGGGAGGTGGAGCATGCCTTGCGGTCCCTGAGGGAAGGGCGTGTCGTCG
TCCTTTTGGACAAGACGCCAGGGGCGGCGAGCGGGGCCACGGAGAGGGCC
CCAGACGGCGAGAATAGCGGCAGTGACACCCATGGAATAGGCGCCGACCT
GGTTGTATTGGCCCATATGGCCTCGAAGGAGACACTTTCCCTCTTCCTGC
GGACCATCTCCGGCGTCACCTACTGTCTATTGCCCCCTGCTAGGCTTACG
GCGTTGTGGAAAGGCAGTGGAGCGGCTGCTACGGCGGCGGGGTTGGATTT
GAAAGACTCTGTGCTCGCGTTGTGGGAGGAGGGCAGGGGGAACGAGGATG
GGAGCAGGGGCTCGTCCGCAGCCAGGAAACGGGCGGCAACACTGCGAGCA
TTGGGAGGTGGAGACGGAGTAGGGGAAAGGGAGGGGGCCGGGGGGGTCAG
GGAGTTGTCTTTGAGCGACTTTTCCAGTCCGGGGCATGTCTTCGTCGTTT
CCCCAGGGGCGGCCATAGGCACGGCCGAGGATAAGGCAATGCGTGGCTTG
GCCAGACCTTCATCTGTGAGCGTGCGAAGGGAGTGGGCCTTGGAAATGGC
GCGCTGGATGGAGGAAAAGGCTGACAGTGGGGAATGGAAAAGGGAGGGAG
GGACGGCGGGCGTGTCGGTGGGAGTGGCGGAGTTGGTGGACCGCGAGACG
GGGGAAGGCATGACTGTGGAGGAGGTGGCGGCATTGGTAGAGGAGCACGG
TTTAGCCGTGACATCTGTAGAAAAGGTGGCTCGGTTCGTGCACGAGCGAC
AACAACAGATAACGACGGAGGGGACTGTCCGTGTTGAGGAGGAAGAGGAG
GGGCGGATATAGAGACCTGAAGGCGAGACAGTAAATTATTTTCAGAGTCG
TACAGGAAATGGAGAGATGTTGCGGAAAAGTTATGCCAGTAACGTACGCG
ACACACACACAAACTAAAGATAAAAGCAAAATTGCCCACGCACAGTCTAA
ATTGAATATTTTGCTGTGAGAGGCTACATGATCAAGTGGAGAGCATCCAT
TT back to topprotein sequence of rna1638 >rna1638-protein ID=rna1638-protein|Name=rna1638|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MFLRWHCAQKLFLCLNISSTMIANTVRQFARVQQLRTLSTSVPSGVRYGK
SFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNAD
IQSLIYGVERNYRARRQEVGISGLSGVILMKILRAKNFRQSQSYAMRWTA
CYGNSSRSGLTGYWGYGICNAMACFF back to topmRNA from alignment at CM002457.1:1129632..1130941+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1638 ID=rna1638|Name=rna1638|organism=Nannochloropsis gaditana|type=mRNA|length=1310bp|location=Sequence derived from alignment at CM002457.1:1129632..1130941+ (Nannochloropsis gaditana)
ATGTTCTTGCGATGGCACTGCGCGCAAAAGCTCTTTTTGTGGTATCCGGC
GACGCCATTTCGCAACTCTCGcgcgccccctcgccctgaGTCCCCTGCAA
AGACAAAGTGTacccctcgctttcctcttgctcatAAATTACCATTTATT
CGTCCAACGGACTTCGTTCACAGCCTCAACATTTCCTCGACCATGATTGC
TAACACCGTGCGCCAGTTTGCCCGGTAAGTGGACGGGAATTAAAAGGGTT
TTGCCCAGAGTGGGTGGATCGGGAACGAGCTGGGGTCGACGTGGACAGGA
ACATTCCAAACCCTCTGGCTCGGTCACCTTTTAACAAAAGGCACTGCACG
GCCGGAACAAGCTCTAGCATGAGCGACAGGGATGACGATGTGAAAGCGAC
CTGCAAAGATTTGACGCGCGGCCGACTGAGCGGCATGCTTGATATAGGTC
GAATCTCAGAAGGTTTCCACGCTCTGCCATGGCCAGTTGCTCCCTCAGCA
ACATGAATTAACTTTTTCAATGCATGCACCCCCCGACAAATTACAACAGC
GTGCAGCAGCTACGCACCCTTTCcacctctgtcccttccgGGGTGCGGTA
CGGCAAGAGCTTCAGTGCAACTTGGTTGGGAGATAAAGGTGCGTAGCCTG
AGCCTCAACGATCGCCGTacatttcctctcttttccagTCTCCCACATTT
TTTCGCGCACAATAATTTTCCTGCTCACTCGAAATTGGCCTTTCCGTAGC
TTGTAATCTGTCTTTTTCATTCTCGCGTCTGAGTGTGGCTCTCTTCCTGG
CGCCTCGCTCTTCGCCCTGGCAGAGTGTTGCCGTTACTTTCTCACCCAGC
TTATCCAACACTACAGGAGCCTGGCCTGTAATCGGCATTATCGGTGGGGC
GCTGGTCTTCTGCGGAAGCTTCATCTCCAACAAGATAATGTTCCACCCCG
ATGTCCGCATCACGCCCTCCAAGCGCAACGCCGATATTCGTGACTGGCGA
TAGACCCCTTGGTCTGACCCAACTGTCCGATGATTCTATAAGAATCCCTC
ATTTATGGTGTTGAACGGAACTACCGTGCGTACTTGAGGTCTCTCATTGG
GGCTGCGTTGAGGCAGGGGCGCGTAGACAGGAGGTCGGAATCAGTGGTTT
GTCCGGTGTAATTTTGATGAAGATATTGCGAGCTAAAAATTTCAGACAGA
GTCAAAGCTACGCCATGAGGTGGACTGCGTGTTATGGCAACAGTAGTCGA
AGCGGTTTAACGGGATATTGGGGGTATGGGATATGTAATGCCATGGCATG
TTTCTTCTAA back to topCoding sequence (CDS) from alignment at CM002457.1:1129632..1130941+ >rna1638 ID=rna1638|Name=rna1638|organism=Nannochloropsis gaditana|type=CDS|length=3186bp|location=Sequence derived from alignment at CM002457.1:1129632..1130941+ (Nannochloropsis gaditana)
ATGTTCTTGCGATGGCACTGCGCGCAAAAGCTCTTTTTGTGCCTCAACAT
TTCCTCGACCATGATTGCTAACACCGTGCGCCAGTTTGCCCGCGTGCAGC
AGCTACGCACCCTTTCcacctctgtcccttccgGGGTGCGGTACGGCAAG
AGCTTCAGTGCAACTTGGTTGGGAGATAAAGGAGCCTGGCCTGTAATCGG
CATTATCGGTGGGGCGCTGGTCTTCTGCGGAAGCTTCATCTCCAACAAGA
TAATGTTCCACCCCGATGTCCGCATCACGCCCTCCAAGCGCAACGCCGAT
ATTCAATCCCTCATTTATGGTGTTGAACGGAACTACCGGGCGCGTAGACA
GGAGGTCGGAATCAGTGGTTTGTCCGGTGTAATTTTGATGAAGATATTGC
GAGCTAAAAATTTCAGACAGAGTCAAAGCTACGCCATGAGGTGGACTGCG
TGTTATGGCAACAGTAGTCGAAGCGGTTTAACGGGATATTGGGGGTATGG
GATATGTAATGCCATGGCATGTTTCTTCTAAATGTTCTTGCGATGGCACT
GCGCGCAAAAGCTCTTTTTGTGCCTCAACATTTCCTCGACCATGATTGCT
AACACCGTGCGCCAGTTTGCCCGCGTGCAGCAGCTACGCACCCTTTCcac
ctctgtcccttccgGGGTGCGGTACGGCAAGAGCTTCAGTGCAACTTGGT
TGGGAGATAAAGGAGCCTGGCCTGTAATCGGCATTATCGGTGGGGCGCTG
GTCTTCTGCGGAAGCTTCATCTCCAACAAGATAATGTTCCACCCCGATGT
CCGCATCACGCCCTCCAAGCGCAACGCCGATATTCAATCCCTCATTTATG
GTGTTGAACGGAACTACCGGGCGCGTAGACAGGAGGTCGGAATCAGTGGT
TTGTCCGGTGTAATTTTGATGAAGATATTGCGAGCTAAAAATTTCAGACA
GAGTCAAAGCTACGCCATGAGGTGGACTGCGTGTTATGGCAACAGTAGTC
GAAGCGGTTTAACGGGATATTGGGGGTATGGGATATGTAATGCCATGGCA
TGTTTCTTCTAAATGTTCTTGCGATGGCACTGCGCGCAAAAGCTCTTTTT
GTGCCTCAACATTTCCTCGACCATGATTGCTAACACCGTGCGCCAGTTTG
CCCGCGTGCAGCAGCTACGCACCCTTTCcacctctgtcccttccgGGGTG
CGGTACGGCAAGAGCTTCAGTGCAACTTGGTTGGGAGATAAAGGAGCCTG
GCCTGTAATCGGCATTATCGGTGGGGCGCTGGTCTTCTGCGGAAGCTTCA
TCTCCAACAAGATAATGTTCCACCCCGATGTCCGCATCACGCCCTCCAAG
CGCAACGCCGATATTCAATCCCTCATTTATGGTGTTGAACGGAACTACCG
GGCGCGTAGACAGGAGGTCGGAATCAGTGGTTTGTCCGGTGTAATTTTGA
TGAAGATATTGCGAGCTAAAAATTTCAGACAGAGTCAAAGCTACGCCATG
AGGTGGACTGCGTGTTATGGCAACAGTAGTCGAAGCGGTTTAACGGGATA
TTGGGGGTATGGGATATGTAATGCCATGGCATGTTTCTTCTAAATGTTCT
TGCGATGGCACTGCGCGCAAAAGCTCTTTTTGTGCCTCAACATTTCCTCG
ACCATGATTGCTAACACCGTGCGCCAGTTTGCCCGCGTGCAGCAGCTACG
CACCCTTTCcacctctgtcccttccgGGGTGCGGTACGGCAAGAGCTTCA
GTGCAACTTGGTTGGGAGATAAAGGAGCCTGGCCTGTAATCGGCATTATC
GGTGGGGCGCTGGTCTTCTGCGGAAGCTTCATCTCCAACAAGATAATGTT
CCACCCCGATGTCCGCATCACGCCCTCCAAGCGCAACGCCGATATTCAAT
CCCTCATTTATGGTGTTGAACGGAACTACCGGGCGCGTAGACAGGAGGTC
GGAATCAGTGGTTTGTCCGGTGTAATTTTGATGAAGATATTGCGAGCTAA
AAATTTCAGACAGAGTCAAAGCTACGCCATGAGGTGGACTGCGTGTTATG
GCAACAGTAGTCGAAGCGGTTTAACGGGATATTGGGGGTATGGGATATGT
AATGCCATGGCATGTTTCTTCTAAATGTTCTTGCGATGGCACTGCGCGCA
AAAGCTCTTTTTGTGCCTCAACATTTCCTCGACCATGATTGCTAACACCG
TGCGCCAGTTTGCCCGCGTGCAGCAGCTACGCACCCTTTCcacctctgtc
ccttccgGGGTGCGGTACGGCAAGAGCTTCAGTGCAACTTGGTTGGGAGA
TAAAGGAGCCTGGCCTGTAATCGGCATTATCGGTGGGGCGCTGGTCTTCT
GCGGAAGCTTCATCTCCAACAAGATAATGTTCCACCCCGATGTCCGCATC
ACGCCCTCCAAGCGCAACGCCGATATTCAATCCCTCATTTATGGTGTTGA
ACGGAACTACCGGGCGCGTAGACAGGAGGTCGGAATCAGTGGTTTGTCCG
GTGTAATTTTGATGAAGATATTGCGAGCTAAAAATTTCAGACAGAGTCAA
AGCTACGCCATGAGGTGGACTGCGTGTTATGGCAACAGTAGTCGAAGCGG
TTTAACGGGATATTGGGGGTATGGGATATGTAATGCCATGGCATGTTTCT
TCTAAATGTTCTTGCGATGGCACTGCGCGCAAAAGCTCTTTTTGTGCCTC
AACATTTCCTCGACCATGATTGCTAACACCGTGCGCCAGTTTGCCCGCGT
GCAGCAGCTACGCACCCTTTCcacctctgtcccttccgGGGTGCGGTACG
GCAAGAGCTTCAGTGCAACTTGGTTGGGAGATAAAGGAGCCTGGCCTGTA
ATCGGCATTATCGGTGGGGCGCTGGTCTTCTGCGGAAGCTTCATCTCCAA
CAAGATAATGTTCCACCCCGATGTCCGCATCACGCCCTCCAAGCGCAACG
CCGATATTCAATCCCTCATTTATGGTGTTGAACGGAACTACCGGGCGCGT
AGACAGGAGGTCGGAATCAGTGGTTTGTCCGGTGTAATTTTGATGAAGAT
ATTGCGAGCTAAAAATTTCAGACAGAGTCAAAGCTACGCCATGAGGTGGA
CTGCGTGTTATGGCAACAGTAGTCGAAGCGGTTTAACGGGATATTGGGGG
TATGGGATATGTAATGCCATGGCATGTTTCTTCTAA back to top
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