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Properties
| Property Name | Value |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
| Orig transcript id | gnl|cribi|Naga_100024g16.4344.mrna |
| Orig protein id | gnl|cribi|Naga_100024g16.4344 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1077470..1078875 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1618 ID=rna1618|Name=rna1618|organism=Nannochloropsis gaditana|type=mRNA|length=5499bp
ATGGGAGAGGATATTGAGGTTGCCTTGTCCCGTCAGGGCCATTGCGCCTG
GGGGAGCGTCTCAGTACCTACTGTGGTAGCCCGGGTGCTGGATGAAGCAG
TGATGGGGAGGGAAGCCAACATGGAAGGTTTGGAGGAAAGCGAGAGGGGA
GTCGTGAGTGTATTTGATACGCTGCGTCTTCGGGTGCATGGTTCGTGGTT
GAATGAGCCACGGCCTCTTCTGACGGAGCTGGTCATTCCGCGGTTGCGCA
GGCATTTCGAGGAACTGACAGTCGGATGGACGAGGGGACAGGGAGGGAGA
GAAGATGGGGAGGAGGGAGAGGGGCCATCGCTTTTGACGTTGCAGACGGG
CTTGAGGGCCATTTCGGCGCACCTGCGAGACTACGGAGGTCGCTACAGCA
CGGGGGAACGGAAGACGTTCGGAAGGGTCCTTTTCCGTCACGCTTACCAA
ATGGACCGAGACTTCTGTCCAGGCGGCCTCCTGGGCGAGGAAACAAAGGG
GACGAGTCTCGCAGCGTGTCGGCGACAGAGGCAGCAAGGGTGCATGGCGG
CTACTCTGTACTGGTACCTCTTGGACTGGAGCAGTGTGCTGGTTCAACAA
GCCGCAAAGGCTTTCTCTACGTCGCCCCGGACGTCCGAAAGGGAGGACAA
TGAACATCAGCTCGAAGTCGCATCTATCCTTACGCCTGCCGGAGAACTTC
TCCTGTTCGTCTTATGTCAACTGGTAACCCTACATCTTCGAACACCCTCC
ACTCTCGCGCTGCAGCTTGATGTCTCTCCGGCGGGGATCTTCCGCCCCCT
CTTGAACTCTATCCCTTTCTCCGATTCCTCTTCCCCCTCGCTATGTTCCC
TTTGGCTACAAACATACAACCACGCCAAGATCATTGCTCTTGCGCAAACG
AACTTGGCCTGCTCCCGTGGAGGCACTGCCAGCGCTACGCGGCCTCTCGG
CTTCTGGTCCTGGCTCCTACATATACTCCGGGGACGGCCTCATTTGAACC
ACTACATCTATACCGCTCCTGCCTTGCGCGAGTCTCTGATCCGTCATGAT
CTGGAGGAACACGTGCGTGTGGCAGGCAGGTCCAATAACGAACTCCCCCC
TGGCAACATGACCAATGGAAGCAAGCCCGTCGAGGGTAGAAACCCGCGGA
GAGCGAAAGACGAGGAATGGAATGAAACACCTCTGCAGCAGGATTTGGGC
ACCATTGAGGGAATGTGGCGCCTCGTTTTCGAGTCTGTCCGACTCGAATT
GCTTGCTGAAAAAATCGACGGAATGTCGGGGAGGCAGAGGACAACAGAAG
GAGGGGCACGAGAACATTTTTCCTGCTGGGCACTGGTAGAGTACATGATT
GCGGCCTCGGACAACTTGAATCTCTTGAGCCAGCACCGACAAGTCCTCGA
CGGCGGTCTTAGCTCTGATCAGGAGGTGATGGGGCGGCATCGCTACTTGG
CTCTGCTCGTCCGTCGGCTCCGGACGCTGTTGAAGGTGTGGCAGCCAGAC
GGGGACTTGATCGCCAGGCTATGGCTCTCCCTCCTCCAGACCTCGGCAAC
TCGTCTCAAGGACGCCTCTCCACCAAATCCCACCCTTTCCGCCCTACCCC
TTGTCAAGACACTCGTTCGCACATGTTGTCGACAGGCAGCGCTTGCCGAT
GGCACGCCCGGCACGTCCCCAGATACGACGCCGCTCTGGGGACGGGACTG
GTCGATCCCGCGCAGCTTGCTCTGGGACCTGGCTGATCCCCGGTACTGCG
CGCTTCCTTCCTACCTTGTCCTTCCTCCGCCCGCCTTTCTTCGCGATCTG
GCGTTTGGTGATGCAGTTCGGCGGTTGGTCAGTCGGGGAAGCGATGAATT
GCTGCTGCTGGCCTCGTGCCTGCTGGAGCGGCACATGAGCATGCTGAAGG
ACGCTGGTGCCCGACGGGACTTCCTAGTCAGCTTGTTGCCGCGTTTGGAG
ACCATGACTTCCTTTTCGCCATCGATTGGGAACAGGGAAAGGTATGCAAG
CTCTTCGCGCTCCCTGGAGTTGGCAGAAATGGCCGCCGGTGCCAAAGGCC
GTGGTGATGGAATGGGCGGTATTAGGGATGATGACATGGGCAACGTCGCT
CAAAACGAAGCAAAAAGAGGACAGCTTCTCGGTTTGCATAACTTGGCGCT
TGCCCTTCTAGTCCTTGTCGATAAAGGGGACGCCGAACAAAAAGTACTTC
TCAATTTTTGGCGACGTCTCAAGCATTTCACGTCCTCCTGCTCTGCACGT
GGAGATGGCGGAGTCCAAAATGCAGAGGCCTCTTTGGCTTTATCGGTGCA
ATTTTTGGCCCTTATAGGCCCGTCGACGGAAGAAAACATTGATTTTTTGC
ACTACGAATCCCTCTTAGACAGCCTTTGGCAGTGGTTCGGGGTCCTGGGC
AAAATGACTACGACAGCGCCGAGACCCATGTCCAGTTTTACAACGAGCAA
TATCAGAATCAACAACTTCACCGGCATCCAAGACGTTGCCGCAGGTAATC
AACGGTATTCACCGGTTGTCCTGTGGTCCCTCCTCCAAGGGTTGGCGTTT
GCCGTCCAGCTTTCTTGCACCTTCCCCTTCCCTCCCAGTCACGTTGCTAA
ATTGCTTGGTACCGTGGAAGGGCTGCTGACACAGTATCGGGAGCTGGACG
ACGCTGCACTCGGCCTACTTCTACGTATGTATCGATGCGTGTGCCCTTTG
AGGAAGGTGACTCTCTTGCGAGACGTCTCGGTCATTCCCTTGTTCGAGAA
AGTGCCTTTGTTTGCGTCGCTGGTCAAAGGAGCACGCAACCATACCTTTG
ACAGTGGAACGTTGCTTGTGAGTACCTCCTGTAATAGGGGAGGTGAAAAT
GGGAGGGAGGAGCAAGAAATATTTGCATCCCAAATGTCCGCTCCAAGTAC
AGATCTGCTGCAGGCCCTGGGCCGGCTCACGAAAGAATGTTGGGAGGTTG
GGGGCGGAAATGACAATGCCATGGACCCGTCACCTGTCCCTTCTACTGCA
CCATACCTGATGTCCGCCTCACGACGTGTTCATAAGCATCTTCATTCCCT
GCCGGCCCTCCAAGCACTGGCCGCAGCGCACGCCCTGACTCACGCCAAGG
GCCTGAAAGCTCCAGATTTTCCCCTGCTCCGCGCCTCATTGGAATCCGGG
ACCGCCACTTACTGTGATCGGCAAACGAAATTCCTTCGTTTTTTGGCTCC
TTGCTATTATAATGCTTACTTGGCTTACGATTTACCCTGCTTTCCTTCCT
TGGAAGGACGCGAGTATCCCGTTCTGGCCGCATGGATCGGGCTCACGCTT
GAGGGCGCCTCCTGGGTAGAAGCTGGAGGTGCGGCTTTAATCAGCACCAT
GAACATCATGGGGCGCGCCGATGTCGATCTCGGGAATGGAGGCATGTCTG
ACATTTTCCCCGAACGATATCTGATGCAATGGTACTGGCCGTTCACAATT
CGGCTTTTTACTGTATTCAAGTCCTCTTCCTCCGACTCTACCGCAAACCG
CGGTCCTGCTTTTCCGCCGCCAGGCGACACAGTGGCGTCGCGGCTATTAA
ATTTGGAAGAGAATTTTCGATCTTACATACATATTCCTACCTCGAAAGAG
CTTTCCTATCTAAAGACTAGGAGTCGGGGCCCTTTCCTTAGTGAACGACC
TCTTTTCGAGCACGACTTACTCGGTCGCCTTCTTTTGCTCAGCAATGTGG
CCATAGCTGTTGCGCCTATTTCAAGCCCGCAGCAGTCCACGCAGGTAAGA
AATGCCAGAAAACAGCAAATCCTTCGCCTCTTGGCCCATGTAGGGGCTGC
CACTCGCTTGTTGGCCAGCGCGAGAGCCGTCAAGACAAACAGTTCTACTC
CGAATCTTATCCTCGCTTTGCGCCCCTCTCATCTTCTGGCCTATGCGTTT
GCCTCTCTTCTTTTCCGTTTCGCCGCGGACGTCATACAAGAAAAGCTGCT
CGATGAATTGATTGCATCTCTCTTTTCTGGGCTGTTTCTTCCTGGCCAAA
TATGGCACCCAAGCAGTACCATTTGCACCCGTGATCCTATCTCTTTGCCT
ACCACGACGCTCTCGCCCTGTCCTACCCTTACAAATCCGATTCTGGCAGC
ACTATATGCGGGTGATGCGATTCGCTGCCTGGCCCAAATTCGTTTCGGGC
GGGAGGCGGTGGTCCAATGGTTGCGATACCTCGTGCAGGAAGGCATGATC
AATTTTGGAGGTGAAAAGACATGGCGGCGGGCGATCGATGGGGATAAGGA
TGGGGAGAGTGATGATCTGAGCGACCAGGGTAGATGCCAGGCTCGCCTTT
TAACATCACTTGCTCACGGGCTATGGCACGCGTCACCCTTTGATTTCCTG
CATGGGCCTGCTATCAACAATTGGAAGATGGAGACACGGGACGAGATAAC
CCTTAAAGGGCTACAAAACTTGATGGGCAACATCCTTTCGCTACGTCCAC
CCTCAGTAAATGATCCACACCACCCTTCTGGAAGTTGTCAGCTGGAAGTT
ACACACATACAAGCGAAGTTACCATACTTTCGGTGGCAATTTTTACTGGA
TCTTGACATCGGGCCAACTTTGAGAGCCGCATTTGCTGCCGATTTGACGT
GTACAGAAAATAGAAGAGTGATCGACAAAGCTGAAGTTCTTCTGAGGTTC
TTGTGCTTCTTTGTTGATTCTCCGTCCTGCACGGCAGAGGGTGTCGTAGA
TGAAAATATCGGAGCTTGCTCCAGTCAGGATTTGTTCCCGATCATGCTGC
CAGTCCTGGAAGCTCTCCTCCGAGCGAATTGGAGAGAGAAAGGGAAAACT
GGTGGTGCAGGCGGCAAACTGTTTCTTCCAGCATTACGCGTAGCCTTTGC
GGTATTACGGTGCCCATTGGCGATCGATTCTGAAAGAGCCGCAAATTTCA
CGCCATTTACTGCAGCCACACCAACGTTGTGGCACTGGGCAATGCGATCA
AAACTCGGAGGCAGCGGCGATTCTGGCACCGATATTGGCCGTGACGTCGA
TGTTGGATGCCAGGATGCTTGCCATAGAAACATCGCTCTGCAAAGATTTG
CGGGGCTGTGGGGCTGTTTGGTAGGCCTTTTAGCTGTATCTCCGGAATAT
ATGAGTGGCTTAGAAATTCAAGCACCAAGTTACTCGCAACTTCACCTAAT
AACGGAAGAAATGTGGAGACTCACAGCGGAAAGTCACTCAATATTCGCGG
CTGTACGCGCCAAAAATATCTACACGCTTTCAAGGCATGTGTGGGGCGGC
CAAGAATGGCATGGGAAATTTTCTGAGGGCAATTCTTTGTTAAACTTCAC
CTGTGGAGATAAAATAAGGACCAGAACACTGGAGGAAACTAAAATCTGCG
AGCAATTGCGAGAGTTTTTGTGCACTGGGGTGGACGAAAATGGGAAGGAC
AGTCTTGCTGATGAGGGTTCAGCCGAAAGCAATGTTACCACGTGGAAAAA
GGTCAGGCCTTGGATATTAGGCTTTAGAAATCGTGACGGAGCTCCGTAG back to topprotein sequence of rna1618 >rna1618-protein ID=rna1618-protein|Name=rna1618|organism=Nannochloropsis gaditana|type=polypeptide|length=258bp
MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEG
LSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAG
LLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITS
MAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTP
MVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIID
QNGGYHMD back to topmRNA from alignment at CM002457.1:1077470..1078875+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1618 ID=rna1618|Name=rna1618|organism=Nannochloropsis gaditana|type=mRNA|length=1406bp|location=Sequence derived from alignment at CM002457.1:1077470..1078875+ (Nannochloropsis gaditana)
ATGGCTTCGCATCATCTGACCACACAGGAGCATGCCCGCAGAAAGGTACG
ACAtgtagggaggaggttgcggCAGGAAGTATGCCGCTACAGACTATTAT
GCTATTATGCTTTTTTACGCCATCCGAAAGCTTCGCTTGTTGCGTGCAAT
GGTAGGCAAGACAAGAAAATTTCATCTGACCGTAGCTTGTGGCCTGTCTT
GCATCTTGCGTCCTTTGTTCTCACTTCCTCACAGGTAGCCGTGGTCACTG
GCGCGGCAGGTACCCTTGGAGAAAGCATCACCGGCATGCTCCTGTCAGAG
GGATACGTAGTGGCTGCTTTGGACATCCGTGCCGAAGGCTTGTCAGCTTT
TAAAGCCACGTTGGATAAAAAGAGCGACCAGTATCATGCCTTCGCGGTAG
ACATCTCGTCAGCCTCCGCAGTTGAAGAAGTCTGCCGCACTATCCTCACT
CGCCTGGGGGCCGTCTCCGTGCTAATCAATAATGCGGGGCTACTGTCGAA
CCATAAATGTGTGCAGACTTCCCTGACGGAGTGGCATCGGGTCATGCATG
TGAACGTGGAcggcgccttcctcctgtcccaaCAACTGCTCCCGTGCATG
CGGTCGATGCATTTCGGACGTATCGTCAACATcacctccatggccgccaa
GACAGGAGGAGTCACCGCGGGGACAGCCTATGCTGTTAGCAAGGGTGCTC
TGGCTAGTTTGACCTTTTCTTTGGCCCGAGAGACGGTGGGTTCCCCTTCT
ATTCAATAGCAAGACCTACCCAGTGTCATAAGGGTAGTGGGATGTCCCGG
TCGCGTCGTTGCTGTTTCCAGATCTACAAATTCAAAGGATGCAGATGTTT
TTCAACGAAAGAGGATCCATCCCTTCCgctccatccatccctttcccgcc
tccctttcgcctAATTTCTATCGCCCCCTGCAGGCAGGAGACGGCATCAC
CGTCAACGGCGTCGCGCCTGCCTACGTGAAAACCCCCATGGTCATGCAGC
AGCTCCGAGAGGAGCAGCGCGTTCAAGTGTTGAACAGTATCCCCGTGGGC
CGTTTTTGCGAGCCCGAAGAAGTCGCCCACACGGTCCGCTTCCTGATCTC
CCCACTGGCCGGGTTCATCACTGGGGAGGTAAGGCGGTCGGGCGCCAGGG
AGATcggagggtggggagagcGGGTTTGGCTCTGCATTCGAGCACGGCGG
TTTCTTGGTTTCGTTTCACGAtcgggtggtggaggacaggggtgGTCCta
cgcctccccttccctccctccttggccccaCCTCGCCTgtcttccctgcc
tcttccatttccctccgCTAAGCTGTCTCTCACACAACACTTCCTTATGT
TTTCCATTCGACGCTTCCAGATTATTGATCAAAATGGAGGTTACCACATG
GACTAA back to topCoding sequence (CDS) from alignment at CM002457.1:1077470..1078875+ >rna1618 ID=rna1618|Name=rna1618|organism=Nannochloropsis gaditana|type=CDS|length=3108bp|location=Sequence derived from alignment at CM002457.1:1077470..1078875+ (Nannochloropsis gaditana)
ATGGCTTCGCATCATCTGACCACACAGGAGCATGCCCGCAGAAAGGTAGC
CGTGGTCACTGGCGCGGCAGGTACCCTTGGAGAAAGCATCACCGGCATGC
TCCTGTCAGAGGGATACGTAGTGGCTGCTTTGGACATCCGTGCCGAAGGC
TTGTCAGCTTTTAAAGCCACGTTGGATAAAAAGAGCGACCAGTATCATGC
CTTCGCGGTAGACATCTCGTCAGCCTCCGCAGTTGAAGAAGTCTGCCGCA
CTATCCTCACTCGCCTGGGGGCCGTCTCCGTGCTAATCAATAATGCGGGG
CTACTGTCGAACCATAAATGTGTGCAGACTTCCCTGACGGAGTGGCATCG
GGTCATGCATGTGAACGTGGAcggcgccttcctcctgtcccaaCAACTGC
TCCCGTGCATGCGGTCGATGCATTTCGGACGTATCGTCAACATcacctcc
atggccgccaaGACAGGAGGAGTCACCGCGGGGACAGCCTATGCTGTTAG
CAAGGGTGCTCTGGCTAGTTTGACCTTTTCTTTGGCCCGAGAGACGGCAG
GAGACGGCATCACCGTCAACGGCGTCGCGCCTGCCTACGTGAAAACCCCC
ATGGTCATGCAGCAGCTCCGAGAGGAGCAGCGCGTTCAAGTGTTGAACAG
TATCCCCGTGGGCCGTTTTTGCGAGCCCGAAGAAGTCGCCCACACGGTCC
GCTTCCTGATCTCCCCACTGGCCGGGTTCATCACTGGGGAGATTATTGAT
CAAAATGGAGGTTACCACATGGACTAAATGGCTTCGCATCATCTGACCAC
ACAGGAGCATGCCCGCAGAAAGGTAGCCGTGGTCACTGGCGCGGCAGGTA
CCCTTGGAGAAAGCATCACCGGCATGCTCCTGTCAGAGGGATACGTAGTG
GCTGCTTTGGACATCCGTGCCGAAGGCTTGTCAGCTTTTAAAGCCACGTT
GGATAAAAAGAGCGACCAGTATCATGCCTTCGCGGTAGACATCTCGTCAG
CCTCCGCAGTTGAAGAAGTCTGCCGCACTATCCTCACTCGCCTGGGGGCC
GTCTCCGTGCTAATCAATAATGCGGGGCTACTGTCGAACCATAAATGTGT
GCAGACTTCCCTGACGGAGTGGCATCGGGTCATGCATGTGAACGTGGAcg
gcgccttcctcctgtcccaaCAACTGCTCCCGTGCATGCGGTCGATGCAT
TTCGGACGTATCGTCAACATcacctccatggccgccaaGACAGGAGGAGT
CACCGCGGGGACAGCCTATGCTGTTAGCAAGGGTGCTCTGGCTAGTTTGA
CCTTTTCTTTGGCCCGAGAGACGGCAGGAGACGGCATCACCGTCAACGGC
GTCGCGCCTGCCTACGTGAAAACCCCCATGGTCATGCAGCAGCTCCGAGA
GGAGCAGCGCGTTCAAGTGTTGAACAGTATCCCCGTGGGCCGTTTTTGCG
AGCCCGAAGAAGTCGCCCACACGGTCCGCTTCCTGATCTCCCCACTGGCC
GGGTTCATCACTGGGGAGATTATTGATCAAAATGGAGGTTACCACATGGA
CTAAATGGCTTCGCATCATCTGACCACACAGGAGCATGCCCGCAGAAAGG
TAGCCGTGGTCACTGGCGCGGCAGGTACCCTTGGAGAAAGCATCACCGGC
ATGCTCCTGTCAGAGGGATACGTAGTGGCTGCTTTGGACATCCGTGCCGA
AGGCTTGTCAGCTTTTAAAGCCACGTTGGATAAAAAGAGCGACCAGTATC
ATGCCTTCGCGGTAGACATCTCGTCAGCCTCCGCAGTTGAAGAAGTCTGC
CGCACTATCCTCACTCGCCTGGGGGCCGTCTCCGTGCTAATCAATAATGC
GGGGCTACTGTCGAACCATAAATGTGTGCAGACTTCCCTGACGGAGTGGC
ATCGGGTCATGCATGTGAACGTGGAcggcgccttcctcctgtcccaaCAA
CTGCTCCCGTGCATGCGGTCGATGCATTTCGGACGTATCGTCAACATcac
ctccatggccgccaaGACAGGAGGAGTCACCGCGGGGACAGCCTATGCTG
TTAGCAAGGGTGCTCTGGCTAGTTTGACCTTTTCTTTGGCCCGAGAGACG
GCAGGAGACGGCATCACCGTCAACGGCGTCGCGCCTGCCTACGTGAAAAC
CCCCATGGTCATGCAGCAGCTCCGAGAGGAGCAGCGCGTTCAAGTGTTGA
ACAGTATCCCCGTGGGCCGTTTTTGCGAGCCCGAAGAAGTCGCCCACACG
GTCCGCTTCCTGATCTCCCCACTGGCCGGGTTCATCACTGGGGAGATTAT
TGATCAAAATGGAGGTTACCACATGGACTAAATGGCTTCGCATCATCTGA
CCACACAGGAGCATGCCCGCAGAAAGGTAGCCGTGGTCACTGGCGCGGCA
GGTACCCTTGGAGAAAGCATCACCGGCATGCTCCTGTCAGAGGGATACGT
AGTGGCTGCTTTGGACATCCGTGCCGAAGGCTTGTCAGCTTTTAAAGCCA
CGTTGGATAAAAAGAGCGACCAGTATCATGCCTTCGCGGTAGACATCTCG
TCAGCCTCCGCAGTTGAAGAAGTCTGCCGCACTATCCTCACTCGCCTGGG
GGCCGTCTCCGTGCTAATCAATAATGCGGGGCTACTGTCGAACCATAAAT
GTGTGCAGACTTCCCTGACGGAGTGGCATCGGGTCATGCATGTGAACGTG
GAcggcgccttcctcctgtcccaaCAACTGCTCCCGTGCATGCGGTCGAT
GCATTTCGGACGTATCGTCAACATcacctccatggccgccaaGACAGGAG
GAGTCACCGCGGGGACAGCCTATGCTGTTAGCAAGGGTGCTCTGGCTAGT
TTGACCTTTTCTTTGGCCCGAGAGACGGCAGGAGACGGCATCACCGTCAA
CGGCGTCGCGCCTGCCTACGTGAAAACCCCCATGGTCATGCAGCAGCTCC
GAGAGGAGCAGCGCGTTCAAGTGTTGAACAGTATCCCCGTGGGCCGTTTT
TGCGAGCCCGAAGAAGTCGCCCACACGGTCCGCTTCCTGATCTCCCCACT
GGCCGGGTTCATCACTGGGGAGATTATTGATCAAAATGGAGGTTACCACA
TGGACTAA back to top
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