EWM29086.1, cds1614 (CDS) Nannochloropsis gaditana

Overview
NameEWM29086.1
Unique Namecds1614
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1077470..1077514 +
Alignment locationCM002457.1:1077704..1078204 +
Alignment locationCM002457.1:1078403..1078597 +
Alignment locationCM002457.1:1078840..1078875 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29086.1
Product3-oxoacyl-(acyl-carrier-protein) reductase
Orig transcript idgnl|cribi|Naga_100024g16.4344.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1077470..1077514 +
CM002457.1supercontigCM002457.1:1077704..1078204 +
CM002457.1supercontigCM002457.1:1078403..1078597 +
CM002457.1supercontigCM002457.1:1078840..1078875 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002347Glc/ribitol_DH
IPR002198DH_sc/Rdtase_SDR
Homology
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|585111605|gb|EWM29086.1| (3-oxoacyl-(acyl-carrier-protein) reductase [Nannochloropsis gaditana])

HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD
Sbjct:    1 MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1124282489|ref|WP_074578427.1| (NAD(P)-dependent oxidoreductase [Polaromonas sp. JS666] >gi|1086842313|emb|SDN66102.1| 3-oxoacyl-[acyl-carrier protein] reductase [Polaromonas sp. JS666])

HSP 1 Score: 290.426 bits (742), Expect = 6.675e-96
Identity = 143/244 (58.61%), Postives = 181/244 (74.18%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            KVA+VTGAAGT+G ++   LL +G  VA +D+  EG    +A  D+   +  AF+ DIS A+AV +    I+   G V +L+NNAG+LSN+K   T   EW RV+  N+DGAF L+QQ++P M++  FGRI+N +S+AAKTGG+TAGTAY+VSKGA++SLTFSLARE A  G+T N VAPAYVKTPM+ +QL EEQR ++L  IPVGRFCEPEE AH VRFL SPL+GFITGEIID NGG  MD
Sbjct:    7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVNHEG---NRALADELGSRASAFSFDISDAAAVSDGHALIVKAFGPVDILVNNAGILSNNKVEATEAGEWRRVLGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSSLTFSLARELAPFGVTANAVAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1199207714|gb|OUR75429.1| (3-oxoacyl-ACP reductase [Alphaproteobacteria bacterium 46_93_T64])

HSP 1 Score: 287.73 bits (735), Expect = 6.844e-95
Identity = 135/246 (54.88%), Postives = 175/246 (71.14%), Query Frame = 0
Query:   13 RRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
              K+AVVTGAAG LGE++    +++G  V   DI    LS   + L    D       D+S  +A  + C  I    GA  +L+NNAG+LSN+K  +TS+ EW RVM +N+DGAF +S++LLP M+S  +GRI+NI S+AAKTGG+TAGTAY  SKG + +LTFSLARE A DG+TVNG++PAY+ TPMVM+QL E QR ++LNSIPV RFCE +EVAH V FL SP++GFITGE+ID NGG H+D
Sbjct:    5 ENKIAVVTGAAGVLGEAVVRRFVAQGIKVVMSDINGSHLSDLHSEL---GDATMPLVFDVSDDNAASKACEKIRENWGAPDILVNNAGILSNNKVAETSVEEWRRVMSINLDGAFYMSRELLPAMKSKKWGRIINICSLAAKTGGITAGTAYTTSKGGMTALTFSLAREAAADGVTVNGISPAYINTPMVMEQLSEAQRQELLNSIPVKRFCEGDEVAHVVSFLTSPMSGFITGEVIDINGGLHLD 247          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|495148927|ref|WP_007873734.1| (NAD(P)-dependent oxidoreductase [Polaromonas sp. CF318] >gi|398088284|gb|EJL78850.1| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase [Polaromonas sp. CF318])

HSP 1 Score: 283.878 bits (725), Expect = 2.519e-93
Identity = 139/244 (56.97%), Postives = 178/244 (72.95%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            KVA+VTGAAGT+G ++   LL +G  VA +D+  E     +   D+   +  AF+ DIS  +AV +    ++   G V +L+NNAG+LSN+K   T   EW RV+  N+DGAF L+QQ++P M++  FGRI+N +S+AAKTGG+TAGTAY+VSKGA++SLTFSLARE A  G+T N VAPAYVKTPM+ +QL EEQR ++L  IPVGRFCEPEE AH VRFL SPL+GFITGEIID NGG  MD
Sbjct:    7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVSHE---RNRTLADELGPRAQAFSFDISDPTAVSDGHALVVKAFGPVDILVNNAGILSNNKVEATEAAEWRRVLGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSSLTFSLARELAPFGVTANAVAPAYVKTPMITEQLNEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1099633831|emb|SFM02014.1| (3-oxoacyl-[acyl-carrier protein] reductase [Variovorax sp. OV329])

HSP 1 Score: 283.108 bits (723), Expect = 7.405e-93
Identity = 141/244 (57.79%), Postives = 176/244 (72.13%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            +VA+VTGAAGT+G + T  LL +G  VA +D++ + L+A     D   +   AF  DI+   AV E    ++   G + +L+NNAG+LSN+KC  T   EW RV+ VN+DGAF L+QQ+LP M++   GRI+N  S+AAKTGG+TAGTAY+VSKGAL SLTFSLARE A  G+T NG++PAYVKTPM+ +QL E QR  +L  IPVGRFCEPEE AH VRFL SPLAGFITGEIID NGG  MD
Sbjct:   17 RVALVTGAAGTMGLAATRALLEDGCRVALVDVQRDRLAALA---DSLGEHAAAFTFDIADPQAVREGHAQVVRAFGPIDILVNNAGILSNNKCEATDAAEWRRVLSVNLDGAFHLAQQVLPGMKARRAGRIINTCSLAAKTGGLTAGTAYSVSKGALTSLTFSLARELAPFGVTANGISPAYVKTPMITEQLSEAQRQALLKDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDLNGGLLMD 257          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|835438110|ref|WP_047506175.1| (NAD(P)-dependent oxidoreductase [Methylibium sp. CF468])

HSP 1 Score: 280.796 bits (717), Expect = 5.254e-92
Identity = 136/244 (55.74%), Postives = 176/244 (72.13%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            KVA+VTGA GT+G ++   L  +G  VA +DI    L +  A + +  +Q  A A DIS A +V    R +  R G V +L+NNAG+LSN+K   TSL EWHRV+  N+DGA L SQ ++P M++  +GRI+N +S+AAKTGG+TAGTAY+VSKGA+++LTFSLARE A  G+T N +APAYV+TPMV +QL + QR  +L  IPVGRFCEPEE AH V FL SPL+GFITGE++DQNGG  MD
Sbjct:    8 KVALVTGAGGTMGRAVVEALRQDGCRVAMIDI---ALGSMDALVARHGEQVLAVACDISQAESVAAAHRQVRERFGEVDILVNNAGVLSNNKIEATSLAEWHRVLGANLDGAMLWSQAVVPAMKARRWGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELAAHGVTANAIAPAYVRTPMVTEQLNDAQRQALLQQIPVGRFCEPEEFAHAVSFLASPLSGFITGEVLDQNGGLLMD 248          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1098034996|emb|SFU73599.1| (3-oxoacyl-[acyl-carrier protein] reductase [Polaromonas sp. YR568])

HSP 1 Score: 280.026 bits (715), Expect = 9.064e-92
Identity = 143/246 (58.13%), Postives = 177/246 (71.95%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHA--FAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            KVA+VTGAAGT+G ++   LL +G  VA +D+  E   A    L +     HA  F+ DIS   AV E    I+   G V +L+NNAG+LSN+K   T   EW RVM  N+DGAF L+QQ++P M++  FGRI+N +S+AAKTGG+TAGTAY+VSKGA+++LTFSLARE A  G+T N VAPAYVKTPM+ +QL EEQR ++L  IPVGRFCEPEE AH VRFL SPL+GFITGEIID NGG  MD
Sbjct:    7 KVALVTGAAGTMGLAVVKALLEDGCKVAMVDVSHERNRALAHELGQ-----HALPFSFDISDPVAVGEGHALIVKAFGPVDILVNNAGILSNNKIEATEANEWRRVMGANLDGAFYLAQQVVPAMKARRFGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELASFGVTANAVAPAYVKTPMITEQLTEEQRQKLLKDIPVGRFCEPEEFAHVVRFLASPLSGFITGEIIDLNGGLLMD 247          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1133544103|ref|WP_076022002.1| (3-oxoacyl-ACP reductase [Betaproteobacteria bacterium GR16-43] >gi|1132409967|gb|APV51919.1| 3-oxoacyl-ACP reductase [Betaproteobacteria bacterium GR16-43])

HSP 1 Score: 280.026 bits (715), Expect = 9.461e-92
Identity = 141/244 (57.79%), Postives = 174/244 (71.31%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            K AVVTGAAGT+G +    LL +G  VA +D+  + L A   +L  K+    A   DI+  +AV    + I   LG V +L+NNAG+LSN+K  QT   EW RVM VN+DGAF  S+  LP M++  +GRI+N+ S+AAKTGG+TAGTAY+ SKGAL SLTFSLARE A  G+TVNG++PAYVKTPM+ + L E QR Q+L +IPVGRFCEPEE AH VRFL SPLAGFITGEI+D NGG  MD
Sbjct:    6 KTAVVTGAAGTMGSAAVRFLLEDGAKVALVDVDPKRLEALARSLPGKT---LAVTCDIADPAAVRAAFQRIEAELGTVDILVNNAGILSNNKVEQTGDDEWRRVMGVNLDGAFHWSRSALPGMKARRWGRIINVCSLAAKTGGLTAGTAYSTSKGALTSLTFSLAREAAAHGVTVNGISPAYVKTPMITEGLTEAQRNQLLATIPVGRFCEPEEFAHAVRFLASPLAGFITGEILDVNGGLQMD 246          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|945418267|gb|KQU74603.1| (3-oxoacyl-ACP reductase [Rhizobacter sp. Root29] >gi|945558360|gb|KQW13441.1| 3-oxoacyl-ACP reductase [Rhizobacter sp. Root1238] >gi|946070475|gb|KRB23074.1| 3-oxoacyl-ACP reductase [Rhizobacter sp. Root16D2])

HSP 1 Score: 276.944 bits (707), Expect = 1.644e-90
Identity = 137/258 (53.10%), Postives = 181/258 (70.16%), Query Frame = 0
Query:    1 MASHHLTTQEHARRKVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            M+ H   T E    KVA+VTGA GT+G ++   L ++G  VA +D+    L++ ++   +  D   A A DIS A +V      +  R G V +L+NNAG+LSN+K   TS+ EWHRV+  N+DGA L SQ ++P M++  +GRI+N +S+AAKTGG+TAGTAY+VSKGA+++LTFSLARE A  G+T N +APAYV+TPMV +QL E QR  +L  IPVGRFCEPEE AH V FL SPL+GFITGE++DQNGG  MD
Sbjct:    1 MSGHMKATLEG---KVALVTGAGGTMGRAVVDALRADGCRVAMIDL---SLASMESLAARHGDAVLAVACDISQAESVRAAHAQVRERFGEVDILVNNAGVLSNNKIEATSIAEWHRVLGANLDGAMLWSQAVVPAMKARRWGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELAAHGVTANAIAPAYVRTPMVTEQLNEAQRQALLQQIPVGRFCEPEEFAHAVSFLASPLSGFITGEVLDQNGGLLMD 252          
BLAST of EWM29086.1 vs. NCBI_GenBank
Match: gi|1176716798|ref|WP_082542024.1| (MULTISPECIES: 3-oxoacyl-ACP reductase [Rhizobacter])

HSP 1 Score: 276.559 bits (706), Expect = 1.974e-90
Identity = 133/244 (54.51%), Postives = 176/244 (72.13%), Query Frame = 0
Query:   15 KVAVVTGAAGTLGESITGMLLSEGYVVAALDIRAEGLSAFKATLDKKSDQYHAFAVDISSASAVEEVCRTILTRLGAVSVLINNAGLLSNHKCVQTSLTEWHRVMHVNVDGAFLLSQQLLPCMRSMHFGRIVNITSMAAKTGGVTAGTAYAVSKGALASLTFSLARETAGDGITVNGVAPAYVKTPMVMQQLREEQRVQVLNSIPVGRFCEPEEVAHTVRFLISPLAGFITGEIIDQNGGYHMD 258
            KVA+VTGA GT+G ++   L ++G  VA +D+    L++ ++   +  D   A A DIS A +V      +  R G V +L+NNAG+LSN+K   TS+ EWHRV+  N+DGA L SQ ++P M++  +GRI+N +S+AAKTGG+TAGTAY+VSKGA+++LTFSLARE A  G+T N +APAYV+TPMV +QL E QR  +L  IPVGRFCEPEE AH V FL SPL+GFITGE++DQNGG  MD
Sbjct:    8 KVALVTGAGGTMGRAVVDALRADGCRVAMIDL---SLASMESLAARHGDAVLAVACDISQAESVRAAHAQVRERFGEVDILVNNAGVLSNNKIEATSIAEWHRVLGANLDGAMLWSQAVVPAMKARRWGRIINTSSLAAKTGGLTAGTAYSVSKGAMSALTFSLARELAAHGVTANAIAPAYVRTPMVTEQLNEAQRQALLQQIPVGRFCEPEEFAHAVSFLASPLSGFITGEVLDQNGGLLMD 248          
The following BLAST results are available for this feature:
BLAST of EWM29086.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111605|gb|EWM29086.1|0.000e+0100.003-oxoacyl-(acyl-carrier-protein) reductase [Nannoc... [more]
gi|1124282489|ref|WP_074578427.1|6.675e-9658.61NAD(P)-dependent oxidoreductase [Polaromonas sp. J... [more]
gi|1199207714|gb|OUR75429.1|6.844e-9554.883-oxoacyl-ACP reductase [Alphaproteobacteria bacte... [more]
gi|495148927|ref|WP_007873734.1|2.519e-9356.97NAD(P)-dependent oxidoreductase [Polaromonas sp. C... [more]
gi|1099633831|emb|SFM02014.1|7.405e-9357.793-oxoacyl-[acyl-carrier protein] reductase [Variov... [more]
gi|835438110|ref|WP_047506175.1|5.254e-9255.74NAD(P)-dependent oxidoreductase [Methylibium sp. C... [more]
gi|1098034996|emb|SFU73599.1|9.064e-9258.133-oxoacyl-[acyl-carrier protein] reductase [Polaro... [more]
gi|1133544103|ref|WP_076022002.1|9.461e-9257.793-oxoacyl-ACP reductase [Betaproteobacteria bacter... [more]
gi|945418267|gb|KQU74603.1|1.644e-9053.103-oxoacyl-ACP reductase [Rhizobacter sp. Root29] >... [more]
gi|1176716798|ref|WP_082542024.1|1.974e-9054.51MULTISPECIES: 3-oxoacyl-ACP reductase [Rhizobacter... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1618rna1618Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications