EWM29054.1, cds1579 (CDS) Nannochloropsis gaditana

Overview
NameEWM29054.1
Unique Namecds1579
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:990396..993353 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29054.1
Productrna binding motif protein 19
Orig transcript idgnl|cribi|Naga_100024g54.4312.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:990396..993353 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait
IPR000504RRM_dom
Homology
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|585111573|gb|EWM29054.1| (rna binding motif protein 19 [Nannochloropsis gaditana])

HSP 1 Score: 1966.81 bits (5094), Expect = 0.000e+0
Identity = 985/985 (100.00%), Postives = 985/985 (100.00%), Query Frame = 0
Query:    1 MAPDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGAASALSNEAAGSGGGFLKKKGGSTFDKGFE 985
            MAPDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGAASALSNEAAGSGGGFLKKKGGSTFDKGFE
Sbjct:    1 MAPDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGAASALSNEAAGSGGGFLKKKGGSTFDKGFE 985          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|673023512|ref|XP_008865717.1| (hypothetical protein H310_03574 [Aphanomyces invadans] >gi|574478945|gb|ETW05940.1| hypothetical protein H310_03574 [Aphanomyces invadans])

HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 369/944 (39.09%), Postives = 525/944 (55.61%), Query Frame = 0
Query:   13 TRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKG--AGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSK-VKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGG-SEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLS-ARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKD 951
            TRL V+N+P +VD+ +L++HFG HG VTDA +++TK G+SR+  F+GFKTE++   A  FF+K+F+DT+R+ V+ A PR + EL RPWS+YSKGSS +++K   A  + +S  D  S +       ++ GG                                           DEF+ TM PRS+TKFW NDDV  T  G   DR +                               A   G  ES+EE  + ++  + +  +E+ ++   ++  DK K  +S+    ++DL +L+SK V++ +D                   DEE +       GE+  G S+DE +D E        + + + D  A+    + ++    G    +V SS              RLF+RNLP+S   EDL EL   +G + ++H+PLDD  R KGF F  F    +A  A  ALD + FQGRL+HVL A+ A  +P+ D       TYK+RKE ER+  A  + GWNASY+R +  V+A+A RL++ KG +LD+E G+MAV+LA+GET LL EN+ FF++EGVD+ V+E AAA++                 RS T +LVKNLP+ST E  L QLF   G +A+ +LPPS+++ LV+F+E +EA++AF+ LAYK+F+HVPLYLEWAP+  F   K        E L   G   S    + A    +   V E +         TL VKNLNF+T+E  L A F+ K   +R V I +K              GK N     LSMG+GFVE++  A A+ A++ ++G  L+GH +  KLS K+L   +  PAK    +TK++ RN+AF+AT K+V+ELFA FG++KTVR+PKKFDG HRGFAF+EFLT  EA +AF ALSS+HLYG+ LVLEWAED +D+ETLR KA++D
Sbjct:    3 TRLFVQNLPLYVDDEKLRKHFGAHGEVTDACVVKTKEGKSRRFGFVGFKTEAQTTAAQKFFDKSFIDTTRINVKVAQPRESEELDRPWSKYSKGSSRYKEKDVVAVDEDTSKVDLNSAKVTKDKTPKETGGF------------------------------------------DEFVETMQPRSKTKFWANDDVVDTEGGSATDRMK-------------------------------ADLTGGDESDEEYQDLDKIHDVKAGDEDSDDDSGDEGMDKSK--ASTTKKPMTDLEFLKSKTVRRMID------------------SDEEDN-------GEVSSGESDDESQDGEP-------SGELSDDDNAVTKLDSTKKVPKQGDTSEAVESSP-------------RLFIRNLPYSCVEEDLTELFAGYGTIVELHMPLDDNKRTKGFGFVLFQTTAEAEAARAALDGKPFQGRLMHVLPAK-AKLEPVVDTSDNSTLTYKQRKEAERKALANTKVGWNASYIRGDATVDALASRLQVNKGDILDKESGNMAVRLAIGETILLQENQAFFEQEGVDVKVMEGAAAKK-------------SNAERSNTVLLVKNLPFSTDETALAQLFRTHGELARFVLPPSKTMALVEFMEPSEARKAFRTLAYKKFQHVPLYLEWAPVKVF---KAPATMTYSEKLKAAGNSTSGGGASAARPDVEADNVTELDN--------TLCVKNLNFSTTEAVLKAAFE-KYGTLRKVTIARK----------KDRHGKLN-----LSMGFGFVEFSTSAAAKNAMQMLQGNLLEGHAMDIKLSRKQLQPVKAKPAKTETPKTKVICRNIAFEATVKDVRELFAAFGQLKTVRMPKKFDGKHRGFAFIEFLTEAEATSAFAALSSSHLYGRHLVLEWAEDADDLETLRAKASRD 785          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|971515268|dbj|GAQ82968.1| (hypothetical protein KFL_001300320, partial [Klebsormidium nitens])

HSP 1 Score: 553.518 bits (1425), Expect = 2.445e-179
Identity = 372/991 (37.54%), Postives = 539/991 (54.39%), Query Frame = 0
Query:   12 FTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQK-------LDRGER--REGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAI-------EAGAAGEEREDGGAR------------KASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQR------AGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESA---AADAGAPL---SFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREKRTK-----LVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGA 956
             TR+CVKN+PK++ E R +EHF   G VTDA+++RT  G SR+  F+G+KTE EA  A  +FN++F+DT RL VE A P G S +PRPWSR+S+GS+ F K                      H E A        E ++E        G  K G  +E D A           EFL  M PR +TK W ND    T+E QK         +GE   ++G R +PGE    S+    SG E        +D  G + E  G +  E  +E  + E +EGG   E D            L+D  YL+S+VK     E     G         G DE     G   E E +   ED  +D+ +  +    + ++AR +  +       E+ + G+E  +  A                   +Q  +     V  TGRLF+RNL ++AT +DL EL + +G ++++HL +D +  + KGFA+  +++PEDAV AME+LDR  FQGRLLH+L A+  P  P +  +P +    K + + ER ++      AGD R WN+ ++ + TV E +A+R  + K ++L  E GD+AV++ALGET ++AE ++  +++GVD+ VLE  A            A+G     RS   +LVKNLP+STT+EE+ QLF RFG++ +V+LPP++++ LV+FLE AE ++AFKGLAYKRFKHVPLYLEWAP          GD+      A   +G++    A + G  +     ++ +V  ++ E   E + ++FVKNL F+T+E  L  HF SK  G+R+V +  + A  G A                LSMG+GF E+A    A+ A++ M+G+ LDGH L  +LS K+   +    K   K+TK     ++VRNVAF+AT K+V++LF+ FG++K++RLPKKFDGSHRGFAFVEF+T QEA NAF A+  THLYG+ LVLE A++ E +E LR +     R G+
Sbjct:    3 MTRICVKNLPKYLTEERFREHFAAKGEVTDARIVRTSDGYSRQFGFIGYKTEDEAFEASKYFNRSFIDTCRLQVEIARPIGDSGIPRPWSRHSQGSTAFVKS---------------------HPEAA--------EPTQEGGAKGRKKGPPKEGEDEENDPALK---------EFLEVMQPRRKTKLWANDTAVGTTEVQKGKSVESKAAKGENGGKKGRRDEPGEDAFESD----SGDESD----LYEDAPGLASERGGRKGAEASDEGSDSEADEGGPSKEVD-----------ALNDSDYLKSRVKADWSDESDVEEGN--------GSDE-----GSGSEPETDSDEEDADKDRRKRSQGAGSSGEKARAAGHVGTLSKDGESDSDGDEETETAANGGDETLPGPPPGAPPRAPTQVDAEQEEGVSETGRLFVRNLAYTATEDDLTELFKQYGELSEVHLVVDKETKKSKGFAYVLYMLPEDAVAAMESLDRSIFQGRLLHILPARRPPSLPDSQNEPPKLGPGKSKVQAEREEQKKANEAAGDTRAWNSLFMNANTVAEGIAQRYGVSKSELLSPEAGDLAVRMALGETHIIAETKKALEEQGVDVGVLERMAT-----------AKGEAAPKRSAHVLLVKNLPFSTTDEEIEQLFERFGSLGRVVLPPTKTVALVEFLEAAEGRKAFKGLAYKRFKHVPLYLEWAPEGIL-----SGDSGAARDAAEKRKGKTDGPRAVNGGTKVGAEKAEVAKVLPEDEEAMDEQTHSVFVKNLAFSTTEAALKKHF-SKADGLRSVLVKMRPAKNGKA----------------LSMGFGFAEFASAEAARKAIQEMQGSLLDGHALVLQLSHKKAGVKEGADKKESKKTKASSTKIIVRNVAFEATKKDVRQLFSPFGQIKSLRLPKKFDGSHRGFAFVEFVTKQEAQNAFDAVRDTHLYGRHLVLEQAKEGEGLEELRARTAAQFRDGS 890          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|1026960173|ref|XP_016611374.1| (hypothetical protein SPPG_02379 [Spizellomyces punctatus DAOM BR117] >gi|907097863|gb|KND03335.1| hypothetical protein SPPG_02379 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 548.125 bits (1411), Expect = 7.143e-177
Identity = 362/975 (37.13%), Postives = 541/975 (55.49%), Query Frame = 0
Query:   12 FTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTK--FWGNDDV----GLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEE---------NGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVK---KGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSED-EQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPK--------KRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGS--FTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKN------REKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATK 950
             +RL VKN+PKH    R KEHF + G VTDAKL++T  G  R+  ++GFKTE +A+ AL +FN TF+DTS++ VE A   G + LPRPWSR+S GSS F++K     + ++++   +R+      +D      RLR Q EE     D+  ++K+  T   D    K +      EFL  M PRS  +   W NDDV    G  + G K +R   +  +   P +   G       G       V  +D E E  +E         +G  +E  E      EE+   E  E   K+  S++ D  LSDL YLRSK++   K  D EI  H       G+      + D+       +I+  S       K    +     N+   ++ A  A   G           SVP +++   PA  +  TGRLF++NLP++ T EDL +L   FGP++++H+P++ +  +PKGFAF  +L+PE AV+A   LD + FQGR+L VL  +E PR P+ D + + ++T+K ++E +R+  AG+E  WN+ ++ S+ V EA+A +L ++K  +L+ +  +MAV+LAL ET ++ E +++ ++EG+DL+  E       +RK            +RSK+ ILVKN+P+ T EEEL +LFG+FGT+ +++LPP++++ LV+FLE  EAK AF+ LAY +FKH+PLYLEWAP+ TF  K        +R      +E   TT + ES A     P          D+  E+ +     TLFVKNLNF T+EE+L   FK   +G+R+V +         A  + K+TG        LSMG+GF+E+     A   +++M+   LDGH L+ K+S     +  P  K       +   TKL+VRN+ F+AT K++++LF+ FG+VK+VR+P+K DG+HRGF FV+FLT QEA +AF +L++THLYG+ LVLEWAED E VE +R K  +
Sbjct:    1 MSRLIVKNLPKHYTLDRFKEHFSEKGEVTDAKLVKTPDGVFRRFGYIGFKTEKQAKDALKYFNNTFVDTSKIQVELAKAIGDASLPRPWSRHSHGSSAFDRK-----TQAEAEAQRQRE----ERQD------RLRRQKEETQ--QDMERKQKLLNTLYADEHDPKLK------EFLEVMRPRSSARGRTWANDDVTSAQGTANNGGKKNRA--KATVLAVPNKKTGGD------GMLVTKTHVTFEDSEDELYDELPSATKDNGSGSTKEGTESAATMVEEDVETETVEDASKQRNSAAHDSSLSDLDYLRSKMRNLSKDEDEEIEAHEDSGADVGEDDDDSMDVDKA--ITPTDIKSSSTIGAVPSKIHASRMALFDNEDDIETPAPIATTQGASNTRPPPSTVSVPKAEQGPPPAELIADTGRLFVKNLPYTCTVEDLHKLFEKFGPLSEVHIPIEKETKKPKGFAFILYLLPEHAVKAFTTLDGQIFQGRILEVLPGKEKPR-PVDDEENS-SQTFKNQREKQRKANAGNEFSWNSLFMNSDAVAEAMARKLGVKKSDILNPDAENMAVRLALAETHIITETKQYLEEEGIDLSAFE-------KRK------------TRSKSIILVKNIPHDTEEEELRELFGKFGTIGRLVLPPAKTIALVEFLELNEAKAAFQRLAYTKFKHLPLYLEWAPVDTFKKKYDPTEVAERRNKKETQKEDKTTTEDVESEA-----PRRTINELASADDATEDPDAMPIATLFVKNLNFETNEERLREAFKV-AKGLRSVRV---------ATKLDKKTGGK------LSMGFGFLEFNTKEDAMRCIKSMQNFKLDGHSLELKISNAAAKSTAPSKKRGSEEPIKVTGTKLIVRNIPFEATKKDIRQLFSTFGQVKSVRIPRKMDGNHRGFGFVDFLTKQEAKSAFESLAATHLYGRHLVLEWAEDVESVEAMRSKTAR 900          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|1183372502|gb|ORX98262.1| (RNA-binding domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 532.717 bits (1371), Expect = 5.549e-172
Identity = 337/956 (35.25%), Postives = 526/956 (55.02%), Query Frame = 0
Query:   12 FTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSS-HFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEE---NGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVP-----PAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKDARKGAA 957
             +R+ VKN+PKH++E R KEHF   G VTD KL+RT  G+SR+  ++GF+TE EA+ A+  FN TF+DTS++VVE A+P G + LPRPWS +S GS+ +F+K G   + +  S    K+K      ++     + ++                     KE +N K K        EFL  M P+++T+ W NDDV   +E  K+         +   GEG   ++             V  +D E E  E+      ++E++EE +   EE EG         K A+   D  +SDL +L+S++   +  E          + +    D +   G +A   E E     E   + E++KE                  A +  +   AR   VP       PA  +  TGRLFLRNLP++ T +DL++L   FGP++++H+P+D +  +PKGFA+  +LIPE AV+A   LD + FQGRLLH+L A+E P+ P  D       + K++KE +R+ ++G++  WN+ ++ S+ + +++A+RL + K  +L+ +  ++AV++A+ ET ++ E +++ ++ G+    L++ A ++                 RS T ILVKN+PY T EEE  +LFG+ G++ +VL+PP++++ +V+FLE +EA+ AF+ LAYKRFK+  +YLE AP+  F  K     NA  E                A  S  I  + + + EE+ + + TLFVKNLNF T+EE L   F+   +G+R V I  K  P   ++               LSMG+GFVE+     AQ AL+A++G  LD H LQ KLS K+ S + P        ++++ TKL+V+N+AF+AT K++++LF+ +G++K+VRLPKKF G HRGFAFVEFLT QEA N    L+STHLYG+ LV+E+AE+++ +E +R K  ++  K  A
Sbjct:    1 MSRIIVKNLPKHLNEDRFKEHFSTQGEVTDVKLIRTAQGQSRRFGYVGFRTEKEAKAAVRHFNNTFIDTSKIVVEKALPYGDASLPRPWSHHSVGSTGYFQKTGIRPEEAQKSIDEKKKKRQEEFEKEMKKKQEHIQ------------------SVYKEFENDKLK--------EFLEVMQPKTKTRTWANDDVKPETELPKVKTNVTAVKSKKAGGEGILLTKTH-----------VKFEDSEDELYEDMPSKPTKDEDDEEMDTNTEEPEG---------KLAN---DTSVSDLDWLKSRM--TMKPESDAESDSSNSDSEDEASDAD---GSEATASEPESSEPKETAPEPEKEKE----------------APATKPSDLPPARPFEVP-------PAELIADTGRLFLRNLPYTCTEDDLKKLFNKFGPLSEIHMPIDKETKKPKGFAYILYLIPEHAVKAFFELDGKFFQGRLLHILPAKEKPQPPKEDES---NMSIKKQKEAKRKAQSGNDFNWNSLFMSSDAIADSIADRLNVAKSDILNPDADNLAVRMAMAETHIITETKDYLEEHGI---CLDAFAKKE-----------------RSDTVILVKNIPYGTAEEEFRELFGKHGSLGRVLIPPAKTIAVVEFLEPSEARAAFRHLAYKRFKNSLIYLEKAPVGVF--KSEYDPNAKPEH------------KKAASSSTTIEEITKADDEEDLDTA-TLFVKNLNFNTTEESLRKTFEG-IEGMRAVRIKTKPDPKNPSK--------------KLSMGFGFVEFTSKDTAQTALKALQGVMLDEHTLQLKLSDKK-SIQEPTGHRKSTSSKKEGTKLLVKNIAFEATKKDLQQLFSNYGQLKSVRLPKKFSGGHRGFAFVEFLTKQEAKNVMNNLASTHLYGRHLVIEYAEEEKSIEEMRAKTEREYSKEEA 825          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|970641608|gb|KUF83624.1| (Multiple RNA-binding domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 530.406 bits (1365), Expect = 1.658e-171
Identity = 350/960 (36.46%), Postives = 502/960 (52.29%), Query Frame = 0
Query:    2 APDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTG-ESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAP--RDP-LADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTF-MPKKRGGDNANEE-GLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNRE----KRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKD 951
            AP   A   G TRL V+N+P +VD  RL+EHF   G VTDA ++RTK G +SR+  F+GFK+  +A  AL FF+++F DT R+ V  A+ + + E+ RPWS+YS GS  ++K                     +H E                 +VA    ++K+   K+E  A  +        EF+ TM  RS+TKFW NDDV                               + P+ G+   +GV   D           E+ ++E +E +  + +  EED+ D +K +  S    +SD+ +LRSK+ K +D +  +      +E      DEE          E  G       DK+    E E  +D+                          P+++   R  P   V   L        +T   +EE+  P          LDD  R KG+ F  F    DA  A+ AL+  AFQGR LHV+ A+  P   DP  A ADP    TYK+RKE+ER+ +A  + GWNASY+R +  V ++AER+ +++G+++D+E G+MAV+LA+GET L+ EN++FF +EGVDL  +E A  ++  ++Q          I RS T IL+KNLP++T EEEL QLF + G + + LLPPS++L +V+FLE +EA++AF+ LAYK+++HVPLYLEWAP+  F  P      + +E+ G+ TT      AA            VG        +   T+ VKNLNF+T E  L   F S+   +R V + ++  P                 +  LSMG+GFVEY      + AL+ ++ T +DGH L  KLS K+ SA    A        +++K++VRNVAF+AT  E++ELF  FG++K VR+PKKFDG HRGFAFVEFLT QEA NAF AL+S+HLYG+ LVLEWAED +D++TLR KAT+D
Sbjct:    9 APKEAAQETG-TRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSAKQAEQALKFFHQSFFDTCRINVRVAVAKESDEMERPWSKYSAGSGRYQK---------------------LHPESG---------------VVATSSKEDKISPEKKEKKAMKQDDTSGEFQEFMETMQARSKTKFWANDDV-------------------------------QGPADGKATTKGVDIADA----------EDSDDEYQELDAMKSQNDEEDDADSQKKSKKS--EPMSDMDFLRSKMSKSIDKDSDNEDSDEDMEN---ADDEE--------ATETTG-------DKKSTSGEAEAEDDK--------------------------PTARLFVRNLPFTAVEEDL----EALCSTYGPVEEVHMP----------LDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKPVKLDPEAAQADP--NLTYKQRKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEGALVKKPNQQQ-------SKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPASSVNASTSEQKGIKTT------AAVVPDVDDDGDTAVG--------DACHTICVKNLNFSTKEAALEKIF-SRCGKLRKVTVARRKDP----------------KRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRD 790          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|566013446|gb|ETI36357.1| (hypothetical protein F443_17505 [Phytophthora parasitica P1569] >gi|570317161|gb|ETO65109.1| hypothetical protein F444_17545 [Phytophthora parasitica P1976])

HSP 1 Score: 529.25 bits (1362), Expect = 5.305e-171
Identity = 350/960 (36.46%), Postives = 502/960 (52.29%), Query Frame = 0
Query:    2 APDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTG-ESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAP--RDP-LADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTF-MPKKRGGDNANEE-GLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNRE----KRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKD 951
            AP   A   G TRL V+N+P +VD  RL+EHF   G VTDA ++RTK G +SR+  F+GFK+  +A  AL FF+++F DT R+ V  A+ + + E+ RPWS+YS GS  ++K                     +H E                 +VA    ++K+   K+E  A  +        EF+ TM  RS+TKFW NDDV                               + P+ G+   +GV   D           E+ ++E +E +  + +  EED+ D +K +  S    +SD+ +LRSK+ K +D +  +      +E      DEE          E  G       DK+    E E  +D+                          P+++   R  P   V   L        +T   +EE+  P          LDD  R KG+ F  F    DA  A+ AL+  AFQGR LHV+ A+  P   DP  A ADP    TYK+RKE+ER+ +A  + GWNASY+R +  V ++AER+ +++G+++D+E G+MAV+LA+GET L+ EN++FF +EGVDL  +E A  ++  ++Q          I RS T IL+KNLP++T EEEL QLF + G + + LLPPS++L +V+FLE +EA++AF+ LAYK+++HVPLYLEWAP+  F  P      + +E+ G+ TT      AA            VG        +   T+ VKNLNF+T E  L   F S+   +R V + ++  P                 +  LSMG+GFVEY      + AL+ ++ T +DGH L  KLS K+ SA    A        +++K++VRNVAF+AT  E++ELF  FG++K VR+PKKFDG HRGFAFVEFLT QEA NAF AL+S+HLYG+ LVLEWAED +D++TLR KAT+D
Sbjct:    9 APKEAAQETG-TRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSAKQAEQALKFFHQSFFDTCRINVRVAVAKESDEMERPWSKYSAGSGRYQK---------------------LHPESG---------------VVATSSKEDKISPEKKEKKAMKQDDTSGEFQEFMETMQARSKTKFWANDDV-------------------------------QGPADGKATTKGVDIADA----------EDSDDEYQELDAMKSQNDEEDDADSQKKSKKS--EPMSDMDFLRSKMSKSIDKDSDNEDSDEDMEN---ADDEE--------ATETTG-------DKKSTSGEAEAEDDK--------------------------PTARLFVRNLPFTAVEEDL----EALCSTYGPVEEVHMP----------LDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKPVKLDPEAALADP--NLTYKQRKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEGALVKKPNQQQ-------SKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPASSVNASTSEQKGIKTT------AAVVPDVDDDGDTAVG--------DACHTICVKNLNFSTKEAALEKIF-SRCGKLRKVTVARRKDP----------------KRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRD 790          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|675174203|ref|XP_008895986.1| (hypothetical protein PPTG_03939 [Phytophthora parasitica INRA-310] >gi|567950873|gb|ETK76580.1| hypothetical protein L915_17039 [Phytophthora parasitica] >gi|567979540|gb|ETL30018.1| hypothetical protein L916_16934 [Phytophthora parasitica] >gi|568009039|gb|ETL83252.1| hypothetical protein L917_16762 [Phytophthora parasitica] >gi|568038953|gb|ETM36467.1| hypothetical protein L914_16844 [Phytophthora parasitica] >gi|568103636|gb|ETN18293.1| hypothetical protein PPTG_03939 [Phytophthora parasitica INRA-310] >gi|570940894|gb|ETP06151.1| hypothetical protein F441_17373 [Phytophthora parasitica CJ01A1] >gi|570971177|gb|ETP34296.1| hypothetical protein F442_17356 [Phytophthora parasitica P10297])

HSP 1 Score: 528.865 bits (1361), Expect = 7.981e-171
Identity = 350/960 (36.46%), Postives = 502/960 (52.29%), Query Frame = 0
Query:    2 APDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTG-ESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLDDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAP--RDP-LADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTF-MPKKRGGDNANEE-GLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNRE----KRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKD 951
            AP   A   G TRL V+N+P +VD  RL+EHF   G VTDA ++RTK G +SR+  F+GFK+  +A  AL FF+++F DT R+ V  A+ + + E+ RPWS+YS GS  ++K                     +H E                 +VA    ++K+   K+E  A  +        EF+ TM  RS+TKFW NDDV                               + P+ G+   +GV   D           E+ ++E +E +  + +  EED+ D +K +  S    +SD+ +LRSK+ K +D +  +      +E      DEE          E  G       DK+    E E  +D+                          P+++   R  P   V   L        +T   +EE+  P          LDD  R KG+ F  F    DA  A+ AL+  AFQGR LHV+ A+  P   DP  A ADP    TYK+RKE+ER+ +A  + GWNASY+R +  V ++AER+ +++G+++D+E G+MAV+LA+GET L+ EN++FF +EGVDL  +E A  ++  ++Q          I RS T IL+KNLP++T EEEL QLF + G + + LLPPS++L +V+FLE +EA++AF+ LAYK+++HVPLYLEWAP+  F  P      + +E+ G+ TT      AA            VG        +   T+ VKNLNF+T E  L   F S+   +R V + ++  P                 +  LSMG+GFVEY      + AL+ ++ T +DGH L  KLS K+ SA    A        +++K++VRNVAF+AT  E++ELF  FG++K VR+PKKFDG HRGFAFVEFLT QEA NAF AL+S+HLYG+ LVLEWAED +D++TLR KAT+D
Sbjct:    9 APKEAAQETG-TRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSAKQAEQALKFFHQSFFDTCRINVRVAVAKESDEMERPWSKYSAGSGRYQK---------------------LHPESG---------------VVATSSKEDKISPEKKEKKAMKQDDTSGEFQEFMETMQARSKTKFWANDDV-------------------------------QGPADGKATTKGVDIADA----------EDSDDEYQELDAMKSQNDEEDDADSQKKSKKS--EPMSDMDFLRSKMSKSIDKDSDNEDSDEDMEN---ADDEE--------ATETTG-------DKKSTSGEAEAEDDK--------------------------PTARLFVRNLPFTAVEEDL----EALCSTYGPVEEVHMP----------LDDTRRRKGYGFVLFRTTVDAQTALTALNGMAFQGRRLHVIFARSKPVKLDPEAALADP--NLTYKQRKELERQIQAQKKTGWNASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEGALVKKPNQQQ-------SKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPASSVNASTSEQKGIKTT------AAVVPDVDDDGDTAVG--------DACHTICVKNLNFSTKEAALEKIF-SRCGKLRKVTVARRKDP----------------KRGMLSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAEDADDIDTLRAKATRD 790          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|1147598972|ref|XP_020103411.1| (multiple RNA-binding domain-containing protein 1-like [Ananas comosus])

HSP 1 Score: 523.087 bits (1346), Expect = 2.778e-168
Identity = 344/943 (36.48%), Postives = 501/943 (53.13%), Query Frame = 0
Query:   12 FTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYS-KGSSHF--EKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERR--QRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQG--VRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREK-RTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLR 945
             +RLCVKN+PK+V+E RL+E F Q G VTDAK++RTK G+SR+ AF+GF++E EA  AL +FN TF+DT +L+ E A   G   LPRPWSRYS K S+H    K  AG      SDQ S                  L + SE   L A+L    +V   K +              EFL  M PRS++K W ND +G    G  +D+  +               + ++P  G+++     T   +G S    GE E  +    EE E EE  E  E D            ++D+ Y +S++KK               + Q        +   K +E +  G S  E +D   E+KE    N                   DG       P+S  +S        TGRLF+RNLP++ T EDL EL   FG V+ +HL +D D  R KG  +  F +PE A+RA+E LD  +FQGRLLHV+ A+    + L        +T+K+ +  +R+  + +GD R WN+ ++R +TVVE +A +  + K ++LDR+  D+AV++ALGET ++AE ++     G+++  LE  A ++               + RS   ILVKNLPYS++E +L  +FG+FG++ KV+LPP+R+L LV FLE AEA+ AFK LAYKR+K  PLYLEWAP + F P      +A EE     GE           +      V E++ + +R  S ++FVKNLNF T +E L  HF +  +   +++V + K             + GK       +SMG+GF+E+  V  A +  + ++GT LDGH L  +L   +   +V     +++  TKL+VRNVAF+AT K++++LF+ FG++K++RLP KF  SHRGFAFVE++T  EA NA  AL++THLYG+ LV+E A++ E +E LR
Sbjct:    1 MSRLCVKNLPKYVNEDRLREFFSQKGEVTDAKIMRTKDGKSRQFAFIGFRSEKEAEAALNYFNNTFMDTRKLICEVARKVGDLNLPRPWSRYSLKRSTHLSQSKDNAGV-----SDQVS------------------LTKISEGEKLNANLCKSTEVNDPKLQ--------------EFLQVMQPRSKSKLWANDAIG---AGDFVDKDSK-----------INEKDCQQPQVGQKQAARPKTRTTDGSS----GEPEATKSTSSEENEVEESLETREHDH-----------MTDMEYFKSRIKKNWSDAESSDSDDEDSKSQTDMDINNENSPSKMQERDANGLSVGE-DDINGEEKESPLVN------------------SDGEDVNNENPTSS-VSDEKKQALETGRLFIRNLPYTTTEEDLMELFSQFGDVSHVHLVVDKDTKRSKGIGYVLFSLPESAIRALEELDNSSFQGRLLHVMPAKPQNDEKLESNHVVENKTFKQLRADQRKASEASGDTRAWNSLFMRPDTVVENIARKTGVSKSELLDRDADDLAVRIALGETHVVAETKKALSNAGINIAALEEYAVKK------------NENMKRSNHVILVKNLPYSSSEGDLASMFGKFGSLDKVVLPPTRTLALVIFLEAAEARSAFKCLAYKRYKDAPLYLEWAPENIFCP---TPPSACEEQKNVVGEKNVKKVLVEESME----GVPEEDIDPDRVESRSIFVKNLNFKTLDESLKLHFSNNMKNGTIKSVKVKKHL-----------KNGK------FVSMGFGFIEFDSVETATSVCKDLQGTVLDGHALSLQLCHGKRDGQVSKKGEKDRSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF-RSHRGFAFVEYVTKHEAQNALQALANTHLYGRHLVIERAKEGESLEELR 820          
BLAST of EWM29054.1 vs. NCBI_GenBank
Match: gi|1035951346|gb|OAY74075.1| (Multiple RNA-binding domain-containing protein 1, partial [Ananas comosus])

HSP 1 Score: 521.546 bits (1342), Expect = 9.817e-168
Identity = 343/942 (36.41%), Postives = 501/942 (53.18%), Query Frame = 0
Query:   13 TRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTGESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPWSRYS-KGSSHF--EKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQSEEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFWGNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVATDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVGLSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEIEGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPLADADPARARTYKERKEIERR--QRAGDERGWNASYLRSETVVEAVAERLRLEKGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVRRKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLLPPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRGGDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFVKNLNFATSEEKLLAHFKSKTQG--VRTVAIPKKTAPVGAARAVSKETGKSNADQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARVPPAKNREK-RTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLR 945
            +RLCVKN+PK+V+E RL+E F Q G VTDAK++RTK G+SR+ AF+GF++E EA  AL +FN TF+DT +L+ E A   G   LPRPWSRYS K S+H    K  AG      SDQ S                  L + SE   L A+L    +V   K +              EFL  M PR+++K W ND +G    G  +D+  +               + ++P  G+++     T   +G S    GE E  +    EE E EE  E  E D            ++D+ Y +S++KK               + Q        +   K +E +  G S  E +D   E+KE    N                   DG       P+S  +S        TGRLF+RNLP++ T EDL EL   FG V+ +HL +D D  R KG  +  F +PE A+RA+E LD  +FQGRLLHV+ A+    + L        +T+K+ +  +R+  + +GD R WN+ ++R +TVVE +A +  + K ++LDR+  D+AV++ALGET ++AE ++     G+++  LE  A ++               + RS   ILVKNLPYS++E +L  +FG+FG++ KV+LPP+R+L LV FLE AEA+ AFK LAYKR+K  PLYLEWAP + F P      +A EE     GE           +      V E++ + +R  S ++FVKNLNF T +E L  HF +  +   +++V + K             + GK       +SMG+GF+E+  V  A +  + ++GT LDGH L  +L   +   +V     +++  TKL+VRNVAF+AT K++++LF+ FG++K++RLP KF  SHRGFAFVE++T  EA NA  AL++THLYG+ LV+E A++ E +E LR
Sbjct:    1 SRLCVKNLPKYVNEDRLREFFSQKGEVTDAKIMRTKDGKSRQFAFIGFRSEKEAEAALNYFNNTFMDTRKLICEVARKVGDLNLPRPWSRYSLKRSTHLSQSKDNAGV-----SDQVS------------------LTKISEGEKLNANLCKSTEVNDPKLQ--------------EFLQVMQPRTKSKLWANDAIG---AGDFVDKDSK-----------INEKDCQQPQVGQKQAARPKTRTTDGSS----GEPEATKSTSSEENEVEESLETREHDH-----------MTDMEYFKSRIKKNWSDAESSDSDDEDSKSQTDMDINNENSPSKMQERDANGLSVGE-DDINGEEKESPLVN------------------SDGEDVNNENPTSS-VSDEKKQALETGRLFIRNLPYTTTEEDLMELFSQFGDVSHVHLVVDKDTKRSKGIGYVLFSLPESAIRALEELDNSSFQGRLLHVMPAKPQNDEKLESNHVVENKTFKQLRADQRKASEASGDTRAWNSLFMRPDTVVENIARKTGVSKSELLDRDADDLAVRIALGETHVVAETKKALSNAGINIAALEEYAVKK------------NENMKRSNHVILVKNLPYSSSEGDLASMFGKFGSLDKVVLPPTRTLALVIFLEAAEARSAFKCLAYKRYKDAPLYLEWAPENIFCP---TPPSACEEQKNVVGEKNVKKVLVEESME----GVPEEDIDPDRVESRSIFVKNLNFKTLDESLKLHFSNNMKNGTIKSVKVKKHL-----------KNGK------FVSMGFGFIEFDSVETATSVCKDLQGTVLDGHALSLQLCHGKRDGQVSKKGEKDRSSTKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKF-RSHRGFAFVEYVTKHEAQNALQALANTHLYGRHLVIERAKEGESLEELR 819          
The following BLAST results are available for this feature:
BLAST of EWM29054.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111573|gb|EWM29054.1|0.000e+0100.00rna binding motif protein 19 [Nannochloropsis gadi... [more]
gi|673023512|ref|XP_008865717.1|0.000e+039.09hypothetical protein H310_03574 [Aphanomyces invad... [more]
gi|971515268|dbj|GAQ82968.1|2.445e-17937.54hypothetical protein KFL_001300320, partial [Klebs... [more]
gi|1026960173|ref|XP_016611374.1|7.143e-17737.13hypothetical protein SPPG_02379 [Spizellomyces pun... [more]
gi|1183372502|gb|ORX98262.1|5.549e-17235.25RNA-binding domain-containing protein [Basidiobolu... [more]
gi|970641608|gb|KUF83624.1|1.658e-17136.46Multiple RNA-binding domain-containing protein 1 [... [more]
gi|566013446|gb|ETI36357.1|5.305e-17136.46hypothetical protein F443_17505 [Phytophthora para... [more]
gi|675174203|ref|XP_008895986.1|7.981e-17136.46hypothetical protein PPTG_03939 [Phytophthora para... [more]
gi|1147598972|ref|XP_020103411.1|2.778e-16836.48multiple RNA-binding domain-containing protein 1-l... [more]
gi|1035951346|gb|OAY74075.1|9.817e-16836.41Multiple RNA-binding domain-containing protein 1, ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1583rna1583Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications