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Properties
| Property Name | Value |
|---|
| Product | rna binding motif protein 19 |
| Orig transcript id | gnl|cribi|Naga_100024g54.4312.mrna |
| Orig protein id | gnl|cribi|Naga_100024g54.4312 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:990337..993645 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1583 ID=rna1583|Name=rna1583|organism=Nannochloropsis gaditana|type=mRNA|length=1623bp
ATGTCTTCAAGTTCAGTGGCAGCCGGGGTGTCTTGTCCGGTTTGCGGAGC
CCAGATTGGATCTCCTGCAACGTGTTGCAAGATCCTGAAGGACTGGAGCA
ACGAAAGCAAAATGCTGTATTATTTCGAAGCTGTCAAGAGCGATGAATGT
AATGTCAATCCTGAAGTACGCCGGTTCTGGGCTGATGCGATAGTCCACTA
CCTCGCCGATCGGAAGCGCTCTTTCGTCTTCAATGGGGAAGAGATTAAAC
TTGCTTACACCCGACGCAGCGTTCTCTCCACCTTATGCCTGCCTCGAATC
CTTTCTGAATTGGATACGACGAAAGAAACGTGCAAGCTGTCAAGTCTCAC
ACCTTGTGTTGGCCGTGTAGAGGCCCCTCTTGCTGCAAGGCTATGGCGTA
CATCTTGGTACTTGACCGAGGCAGGCGCAAGATTCAGTGCATGGACGGTA
CGGACATTAGTCGTTAAACCAGTCCGGAGAGCGTGGTCCTATGCAATCGG
ACACGACGGCGACTTTGATGACGATACAGAGATGAGAGAGGCGGAGGACG
AGCAAATCGCCTCTCTGAGAGCCTCGCGCGTCCATGTGGGCTTGTGCGAG
GCAGCGGCTGAACTCGTGACTGCGTATTTTCTTAGCCGGCCAGATCTCGA
GCGGACTGTAAGTTTGAGTGAAGGTGGCGACGAAGGGGCAGGCGACGTCC
AGGGTGATGGGGGTCCCGGCGGGCAGGGAGGGGCGACGGCCGGGATGTGC
TCTTTCCTGCACGTGTGTCGGAGGGCTGCGTCCTCGTCGCCGACGCCCTC
GGCCTCTCCGGCGTCCAAAATCCTTCGAACGTGTTCGCGCGTAGATGGCG
AGGTTCTGGCCACGGTCATGGTACGGCTAAAACTGGCAGTGCAAGAAGGC
AGCTACCTCAAGATTCTCGGACGTGGGGGCGGCGCGGGCTCGCTAACAGC
AGCGGACAAGACGGTTCTCGACTTCCGTATTCGGGTGAACAAGATAGACA
GGATGCTGGGCGCACAGGAAGCACAGATGGTAGAGAGCAAGTTGCGGGCA
GCAGGATTGCATTCGAGGGGGCTGAGCGCCCAGGCACTCGTCGAGTGGCG
ACGGCATAAGAAGCTAGCAACGTCTGTAGAAAAGCTCCGGGGGGCAATGG
TGAATATGCTTTCTATCTATCACTCTATCGAAGGACAACATGCTGACATG
CAGGTCTTTGCAGGCTTGCGAGGCGGAAATTTGGCTCTGAAGCAGCAAAA
AACCGCCGCGAAGGCGATGGGACTGGGAGGGGTGGAGGATGTGGAGGAGG
CCCTCCGGGAAGCACAGGAGCTCATTGATGAGTCGGATGAGCTGGGTAAA
ATCTTATCCAGCCCCTTAATGAATCGAGAAGGACCAACGGAAGATATCAA
GGAGGAAGAGCTCTTGAAGGAGCTCGAGGCCTTGGCAATAGCTGAGGCCG
AAGGCCAGCGCGATGTCGACATCGAGAAGGATGCGACGGAGAGAAGGAGG
AGTGCAAAAGAGGCGGAAGCAGCGGTGTCGTACGATTTACCCGACATCAG
CCACCTTTCTCCAATTGTCGGAAAAACAGAGACTGTGGCAAGGTCATCCT
CACGGGTGCGTGTGGTCAAATAG back to topprotein sequence of rna1583 >rna1583-protein ID=rna1583-protein|Name=rna1583|organism=Nannochloropsis gaditana|type=polypeptide|length=985bp
MAPDPPASNAGFTRLCVKNVPKHVDERRLKEHFGQHGTVTDAKLLRTKTG
ESRKMAFLGFKTESEARTALAFFNKTFLDTSRLVVEAAMPRGASELPRPW
SRYSKGSSHFEKKGAGGKSSSDSDQASKRKYSTVHGEDAGGTAKRLREQS
EEAHLVADLGGQEKVGGTKEEDNAKTKKQRRVSKDEFLATMMPRSQTKFW
GNDDVGLTSEGQKLDRGERREGLRWKPGEGREGSEHRRPSGGERRGRGVA
TDDGEGESEEENGEEEEEEEEEEEEEEEEEGGEEDEKDKKKFASSSCDVG
LSDLGYLRSKVKKGLDGEIGDHRGGPGLEGQRLGGDEERDRGGKAKEGEI
EGGSEDEQEDKEEEDKEEERTNDRARDSRAIEAGAAGEEREDGGARKASV
PSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADMHLPL
DDAHRPKGFAFASFLIPEDAVRAMEALDRRAFQGRLLHVLAAQEAPRDPL
ADADPARARTYKERKEIERRQRAGDERGWNASYLRSETVVEAVAERLRLE
KGQVLDREGGDMAVKLALGETFLLAENREFFQKEGVDLTVLESAAAQQVR
RKQLSQEARGGPTISRSKTTILVKNLPYSTTEEELTQLFGRFGTVAKVLL
PPSRSLGLVDFLEGAEAKRAFKGLAYKRFKHVPLYLEWAPLHTFMPKKRG
GDNANEEGLATTGEGESAAADAGAPLSFQIGRVGEDEGEEEREGSFTLFV
KNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNA
DQPALSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLSTKRLSARV
PPAKNREKRTKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHR
GFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATK
DARKGAASALSNEAAGSGGGFLKKKGGSTFDKGFE back to topmRNA from alignment at CM002457.1:990337..993645- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1583 ID=rna1583|Name=rna1583|organism=Nannochloropsis gaditana|type=mRNA|length=3309bp|location=Sequence derived from alignment at CM002457.1:990337..993645- (Nannochloropsis gaditana)
TCGCTGTTTGATGCTAGATGTGCTTTGGCACGCTCTCAGATAGCGACCTC
CCCCCCCCCAGGGAGACGGTAATGATTTTATCACAGTTTTGGACGTGGCA
AGGTAGCGTCCGCGTGTTCCATTTCTCATATGGGTGAATTTTTCATAAAA
ATTCGGGACTATGATGTCCTTTGCATGCGACAGTATGCTTCCCTTGCGGT
TTCTTTCAGGGGGCCTCGTGCTCCTCTGCTTCTCGTTCCGATGGCCTCAC
GCGTAGTATCTCCTGCCCCCCTGCCGATGCTGCAGAAGCACAATGGCGCC
TGATCCACCCGCTTCCAATGCGGGATTCACCCGTTTGTGTGTCAAAAATG
TGCCCAAACACGTGGACGAGCGACGACTCAAGGAACACTTCGGACAGCAC
GGGACGGTGACCGATGCGAAGCTCCTCCGTACCAAAACGGGGGAGTCCCG
GAAAATGGCGTTCCTGGGCTTTAAGACCGAGTCAGAGGCTCGTACTGCAC
TAGCATTCTTCAATAAGACTTTCTTAGACACATCACGGCTGGTCGTTGAG
GCGGCTATGCCTCGAGGGGCGAGCGAGCTGCCCCGGCCATGGAGTAGATA
CTCGAAAGGGAGCTCTCACTTCGAGAAGAAAGGTGCCGGCGGGAAGAGCA
GCAGCGACAGCGATCAGGCATCGAAACGAAAGTATAGCACAGTACACGGA
GAGGACGCTGGAGGTACGGCTAAGCGACTTCGCGAGCAGAGCGAAGAAGC
TCACTTGGTGGCGGACCTCGGGGGCCAGGAGAAGGTCGGGGGGACGAAGG
AAGAGGACAACGCCAAGACAAAGAAGCAGCGACGTGTGAGCAAGGACGAG
TTTCTGGCAACAATGATGCCGCGTTCTCAAACCAAGTTTTGGGGAAACGA
CGACGTGGGCCTCACATCGGAGGGGCAGAAGCTGGATCGAGGCGAGCGGC
GTGAGGGACTACGGTGGAAGCCGGGAGAGGGGAGGGAGGGGAGTGAACAT
CGGCGGCCATCCGGCGGCGAAAGGAGAGGCAGGGGTGTTGCCACGGATGA
CGGCGAGGGGGAGAGCGAGGAGGAGAATGGGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGGGGAGGAGGACGAA
AAGGACAAGAAGAAATTTGCGTCTTCATCATGTGATGTTGGACTTTCTGA
TCTCGGCTATCTACGATCGAAAGTGAAGAAGGGTTTGGACGGAGAGATTG
GCGACCATCGCGGGGGTCCTGGCCTCGAGGGGCAGCGCCTGGGGGGGGAC
GAGGAGAGGGACCGAGGGGGCAAGGCAAAGGAAGGTGAGATAGAGGGTGG
TAGTGAGGACGAGCAGGAAGACAAGGAGGAGGAAGACAAGGAGGAGGAAA
GAACGAATGATAGGGCGCGAGACAGCCGGGCGATCGAGGCGGGGGCAGCG
GGCGAGGAGAGGGAGGACGGAGGGGCGCGGAAGGCCTCAGTACCCTCCTC
TCAGGAACTTTCCCGCCCTGCGCCCGACGTAGGCGTGACAGGGCGGCTGT
TTCTCAGGAACTTACCTTTCTCGGCCACGACCGAGGACCTGGAGGAGCTG
TTGCGACCCTTCGGGCCGGTTGCGGACATGCACTTGCCGCTGGACGATGC
CCACCGACCGAAGGGCTTCGCCTTCGCCTCTTTCCTGATCCCCGAGGACG
CAGTGCGGGCCATGGAAGCCCTGGACCGGCGGGCTTTCCAAGGGCGGCTA
CTGCACGTGCTGGCGGCCCAGGAGGCGCCCAGGGACCCTTTGGCCGACGC
CGACCCGGCCCGCGCGCGGACTTACAAGGAACGGAAGGAGATCGAACGTC
GGCAGCGGGCGGGGGACGAGCGGGGGTGGAACGCAAGCTACTTGCGGAGT
GAAACCGTGGTGGAGGCGGTGGCCGAGCGCCTGCGGCTGGAGAAGGGCCA
GGTGCTTGACCGGGAGGGGGGCGACATGGCTGTGAAGCTCGCCTTGGGCG
AGACCTTCCTGCTGGCGGAGAACCGGGAGTTCTTCCAGAAGGAGGGGGTG
GACCTGACGGTCTTGGAGAGTGCGGCTGCGCAGCAAGTCCGACGGAAGCA
GCTATCCCAGGAGGCAAGGGGCGGGCCAACAATATCCCGGAGCAAGACCA
CGATCTTGGTCAAAAACCTGCCCTACAGCACCACGGAGGAGGAGCTTACC
CAGCTCTTTGGTCGCTTCGGGACCGTGGCCAAAGTCCTTCTGCCGCCCAG
TCGGTCCCTAGGCCTGGTGGACTTCCTTGAGGGCGCAGAGGCGAAGAGAG
CCTTCAAGGGGCTAGCCTACAAGCGCTTCAAGCACGTGCCCCTCTACCTG
GAGTGGGCGCCGCTGCATACATTCATGCCGAAGAAGAGGGGAGGAGACAA
TGCAAACGAAGAGGGACTGGCGACTACAGGAGAAGGCGAGTCTGCAGCTG
CCGACGCGGGCGCTCCATTGTCGTTTCAGATAGGAAGGGTAGGGGAGGAC
GAGGGGGAGGAAGAGAGGGAGGGTTCCTTTACGCTCTTTGTCAAAAATCT
AAATTTCGCTACGTCGGAGGAAAAGCTATTGGCGCACTTTAAGAGCAAAA
CCCAGGGGGTGCGAACAGTGGCAATCCCTAAGAAAACGGCTCCTGTGGGT
GCGGCCCGCGCGGTGAGCAAAGAGACAGGGAAGAGCAACGCCGACCAGCC
CGCCTTGTCCATGGGATATGGCTTTGTCGAATACGCAGGCGTGGCCCAGG
CTCAGGCGGCCTTACGGGCAATGGAGGGCACGGATCTGGACGGTCACAGG
TTGCAGTGCAAGCTCTCGACGAAGAGACTCTCAGCCCGCGTCCCGCCTGC
CAAGAACAGAGAGAAGCGGACTAAACTGGTGGTGCGCAATGTGGCCTTTC
AAGCCACGCCCAAGGAGGTCAAGGAGTTGTTCGCGGGCTTCGGGAAGGTC
AAGACGGTCCGACTTCCCAAGAAGTTTGATGGAAGCCACCGAGGATTTGC
CTTCGTGGAGTTTTTGACCGCCCAAGAGGCGAACAATGCGTTCGTTGCCC
TGTCGTCGACGCATCTCTACGGGAAGCGCTTGGTATTGGAATGGGCCGAG
GACAAAGAGGATGTGGAAACCCTGCGGGAGAAAGCCACAAAGGATGCAAG
GAAAGGAGCGGCGTCGGCGCTGAGTAACGAGGCCGCAGGAAGTGGAGGAG
GGTTCTTGAAGAAAAAGGGGGGCAGCACCTTTGACAAGGGTTTCGAGTGA
GTGGGGCTTGCTGCGATTGCCACAAAAAGTAAATTCTCTTCGTAATTGTA
AGTGTAATA back to topCoding sequence (CDS) from alignment at CM002457.1:990337..993645- >rna1583 ID=rna1583|Name=rna1583|organism=Nannochloropsis gaditana|type=CDS|length=2958bp|location=Sequence derived from alignment at CM002457.1:990337..993645- (Nannochloropsis gaditana)
ATGGCGCCTGATCCACCCGCTTCCAATGCGGGATTCACCCGTTTGTGTGT
CAAAAATGTGCCCAAACACGTGGACGAGCGACGACTCAAGGAACACTTCG
GACAGCACGGGACGGTGACCGATGCGAAGCTCCTCCGTACCAAAACGGGG
GAGTCCCGGAAAATGGCGTTCCTGGGCTTTAAGACCGAGTCAGAGGCTCG
TACTGCACTAGCATTCTTCAATAAGACTTTCTTAGACACATCACGGCTGG
TCGTTGAGGCGGCTATGCCTCGAGGGGCGAGCGAGCTGCCCCGGCCATGG
AGTAGATACTCGAAAGGGAGCTCTCACTTCGAGAAGAAAGGTGCCGGCGG
GAAGAGCAGCAGCGACAGCGATCAGGCATCGAAACGAAAGTATAGCACAG
TACACGGAGAGGACGCTGGAGGTACGGCTAAGCGACTTCGCGAGCAGAGC
GAAGAAGCTCACTTGGTGGCGGACCTCGGGGGCCAGGAGAAGGTCGGGGG
GACGAAGGAAGAGGACAACGCCAAGACAAAGAAGCAGCGACGTGTGAGCA
AGGACGAGTTTCTGGCAACAATGATGCCGCGTTCTCAAACCAAGTTTTGG
GGAAACGACGACGTGGGCCTCACATCGGAGGGGCAGAAGCTGGATCGAGG
CGAGCGGCGTGAGGGACTACGGTGGAAGCCGGGAGAGGGGAGGGAGGGGA
GTGAACATCGGCGGCCATCCGGCGGCGAAAGGAGAGGCAGGGGTGTTGCC
ACGGATGACGGCGAGGGGGAGAGCGAGGAGGAGAATGGGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGGGGAGG
AGGACGAAAAGGACAAGAAGAAATTTGCGTCTTCATCATGTGATGTTGGA
CTTTCTGATCTCGGCTATCTACGATCGAAAGTGAAGAAGGGTTTGGACGG
AGAGATTGGCGACCATCGCGGGGGTCCTGGCCTCGAGGGGCAGCGCCTGG
GGGGGGACGAGGAGAGGGACCGAGGGGGCAAGGCAAAGGAAGGTGAGATA
GAGGGTGGTAGTGAGGACGAGCAGGAAGACAAGGAGGAGGAAGACAAGGA
GGAGGAAAGAACGAATGATAGGGCGCGAGACAGCCGGGCGATCGAGGCGG
GGGCAGCGGGCGAGGAGAGGGAGGACGGAGGGGCGCGGAAGGCCTCAGTA
CCCTCCTCTCAGGAACTTTCCCGCCCTGCGCCCGACGTAGGCGTGACAGG
GCGGCTGTTTCTCAGGAACTTACCTTTCTCGGCCACGACCGAGGACCTGG
AGGAGCTGTTGCGACCCTTCGGGCCGGTTGCGGACATGCACTTGCCGCTG
GACGATGCCCACCGACCGAAGGGCTTCGCCTTCGCCTCTTTCCTGATCCC
CGAGGACGCAGTGCGGGCCATGGAAGCCCTGGACCGGCGGGCTTTCCAAG
GGCGGCTACTGCACGTGCTGGCGGCCCAGGAGGCGCCCAGGGACCCTTTG
GCCGACGCCGACCCGGCCCGCGCGCGGACTTACAAGGAACGGAAGGAGAT
CGAACGTCGGCAGCGGGCGGGGGACGAGCGGGGGTGGAACGCAAGCTACT
TGCGGAGTGAAACCGTGGTGGAGGCGGTGGCCGAGCGCCTGCGGCTGGAG
AAGGGCCAGGTGCTTGACCGGGAGGGGGGCGACATGGCTGTGAAGCTCGC
CTTGGGCGAGACCTTCCTGCTGGCGGAGAACCGGGAGTTCTTCCAGAAGG
AGGGGGTGGACCTGACGGTCTTGGAGAGTGCGGCTGCGCAGCAAGTCCGA
CGGAAGCAGCTATCCCAGGAGGCAAGGGGCGGGCCAACAATATCCCGGAG
CAAGACCACGATCTTGGTCAAAAACCTGCCCTACAGCACCACGGAGGAGG
AGCTTACCCAGCTCTTTGGTCGCTTCGGGACCGTGGCCAAAGTCCTTCTG
CCGCCCAGTCGGTCCCTAGGCCTGGTGGACTTCCTTGAGGGCGCAGAGGC
GAAGAGAGCCTTCAAGGGGCTAGCCTACAAGCGCTTCAAGCACGTGCCCC
TCTACCTGGAGTGGGCGCCGCTGCATACATTCATGCCGAAGAAGAGGGGA
GGAGACAATGCAAACGAAGAGGGACTGGCGACTACAGGAGAAGGCGAGTC
TGCAGCTGCCGACGCGGGCGCTCCATTGTCGTTTCAGATAGGAAGGGTAG
GGGAGGACGAGGGGGAGGAAGAGAGGGAGGGTTCCTTTACGCTCTTTGTC
AAAAATCTAAATTTCGCTACGTCGGAGGAAAAGCTATTGGCGCACTTTAA
GAGCAAAACCCAGGGGGTGCGAACAGTGGCAATCCCTAAGAAAACGGCTC
CTGTGGGTGCGGCCCGCGCGGTGAGCAAAGAGACAGGGAAGAGCAACGCC
GACCAGCCCGCCTTGTCCATGGGATATGGCTTTGTCGAATACGCAGGCGT
GGCCCAGGCTCAGGCGGCCTTACGGGCAATGGAGGGCACGGATCTGGACG
GTCACAGGTTGCAGTGCAAGCTCTCGACGAAGAGACTCTCAGCCCGCGTC
CCGCCTGCCAAGAACAGAGAGAAGCGGACTAAACTGGTGGTGCGCAATGT
GGCCTTTCAAGCCACGCCCAAGGAGGTCAAGGAGTTGTTCGCGGGCTTCG
GGAAGGTCAAGACGGTCCGACTTCCCAAGAAGTTTGATGGAAGCCACCGA
GGATTTGCCTTCGTGGAGTTTTTGACCGCCCAAGAGGCGAACAATGCGTT
CGTTGCCCTGTCGTCGACGCATCTCTACGGGAAGCGCTTGGTATTGGAAT
GGGCCGAGGACAAAGAGGATGTGGAAACCCTGCGGGAGAAAGCCACAAAG
GATGCAAGGAAAGGAGCGGCGTCGGCGCTGAGTAACGAGGCCGCAGGAAG
TGGAGGAGGGTTCTTGAAGAAAAAGGGGGGCAGCACCTTTGACAAGGGTT
TCGAGTGA back to top
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