EWM29212.1, cds1566 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|585111732|gb|EWM29212.1| (dead deah box rna [Nannochloropsis gaditana]) HSP 1 Score: 996.882 bits (2576), Expect = 0.000e+0 Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0 Query: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGGREAGGKPLKAGQGALKRGGGRGRTGGRGQGRRPGRF 492 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGGREAGGKPLKAGQGALKRGGGRGRTGGRGQGRRPGRF Sbjct: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGGREAGGKPLKAGQGALKRGGGRGRTGGRGQGRRPGRF 492
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|553193625|ref|XP_005855808.1| (dead deah box rna, partial [Nannochloropsis gaditana CCMP526] >gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0 Query: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLER 414 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLER Sbjct: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLER 414
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|298711460|emb|CBJ32599.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 307/399 (76.94%), Postives = 354/399 (88.72%), Query Frame = 0 Query: 30 EDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRE 428 ED +FE+LGV PLCEA A +GWT T IQ+QA+P A +G+DVIGLAETGSGKTGAFALP+LQALL PQRLFAV++APTRELAFQI+EV EALG IGLK+ C+VGG+DM Q++ALA KPHVV+ATPGRLVDHLENTKGF +R A++LVLDEADRML MDFEEEINK+L+++P + RRT LFSATMTSKVAKLQRASL +P +VE ++KF+TP+TLVQQYLFIPAK+KDCYLAY LNE AGQ+ +VFV+TCNNAQR+ALLLRNLGF A+CLHGQM QPKRLGAL KFKSGQR++LIATDVASRGLDIP+VDLV+N +IPSHGKDYIHRVGRTARAGRAGRSIA VTQYDVEVYQR+EAL+G KLP Y DEETVL+L ERV EAQR+AARE+RE Sbjct: 402 EDIKASFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGKTGAFALPILQALLENPQRLFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKVLSVLP--RERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYVCDEETVLVLQERVGEAQRMAAREMRE 798
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|673015884|ref|XP_008861903.1| (hypothetical protein H310_00784 [Aphanomyces invadans] >gi|574483501|gb|ETW10492.1| hypothetical protein H310_00784 [Aphanomyces invadans]) HSP 1 Score: 626.706 bits (1615), Expect = 0.000e+0 Identity = 303/444 (68.24%), Postives = 359/444 (80.86%), Query Frame = 0 Query: 29 VEDDVQ----TFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGGREAGGKPLKAGQ 468 VEDD Q +F LGV LCE+ AA+GWT+P+ IQQ+++P AL G+D+IGLAETGSGKTGAF +P+LQ LLA PQRLFA+VLAPTRELAFQI E FEALG+SIGLK CVVGG+DMM Q +ALA+KPHVV+ATPGRLVDHLENTKGF +R ++LVLDEADRMLSMDFEEEIN+I+ +MP RRT LFSATMTSKVAKLQRASL PVKVE + KF TP TL Q+YLFIPAKYKDCYLAY LNE AGQ++L+F +TCN QR+ L+LR+LGF AICLHGQMTQP RLGAL+KFK+ QRSIL+ TDVASRGLDIP+VD+VIN+DIP++GKDYIHRVGRTARAGRAG +++ VTQYDVE+YQR+E LLG KL Y +E TVL++LERV EAQR A EL+E T KG KR R G+ E +G + +P K+ + Sbjct: 20 VEDDEQIEDKSFSELGVNPALCESIAALGWTRPSKIQQKSLPPALAGKDIIGLAETGSGKTGAFVIPILQDLLASPQRLFALVLAPTRELAFQISEQFEALGSSIGLKCACVVGGIDMMNQQVALAKKPHVVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIIQLMPN--ERRTYLFSATMTSKVAKLQRASLKSPVKVEITHKFATPETLAQKYLFIPAKYKDCYLAYVLNEFAGQSMLIFASTCNGTQRMTLMLRSLGFPAICLHGQMTQPNRLGALNKFKAKQRSILVCTDVASRGLDIPSVDVVINYDIPTNGKDYIHRVGRTARAGRAGIALSFVTQYDVELYQRIEHLLGKKLDAYACEESTVLVMLERVGEAQRAATIELKEET----SKGTGKRARYGKNHEGDGDGDDESSNKRPYKSSK 457
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|301119991|ref|XP_002907723.1| (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0 Identity = 300/436 (68.81%), Postives = 355/436 (81.42%), Query Frame = 0 Query: 20 DLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGG-GKKGGRKRGRDGEGDEDEGGE 454 D +++ A+G +F LGV +CEA A+GW+ P+ IQQQAIP L G+D+IGLAETGSGKTGAF +P+LQ+LL PQRL+A+VLAPTRELA+QI E FEALGASIGLK CVVGG+DMM Q +ALARKPHVV+ATPGRLVDHLENTKGF +R +FLVLDEADRMLSMDFEEEIN+I+ +MP R T LFSATMTSKV KLQRASL DPVKVE + KF TP TL Q YLFIPAK+KDCYLAY LNE AGQ++L+F +TCN Q++ L+LRNLGF AICLHGQM QP RLGAL+KFK+ R++L+ TDVASRGLDIP+VD+VIN+DIP+HGKDYIHRVGRTARAGRAG +I+ VTQYDVE+YQR+E LLGTKL Y +EETVL++ ERV+EAQRIA E++E G G K GR D EGD++EGGE Sbjct: 15 DANNETAEGFSGSA-SFAELGVDSAICEAIEAVGWSAPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQSLLHNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMPAD--RNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQRIEHLLGTKLDAYSCEEETVLVITERVNEAQRIATIEMKEAAANGTGIKRGRYARDDNEGDDEEGGE 447
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|698789384|ref|XP_009827724.1| (hypothetical protein H257_04796 [Aphanomyces astaci] >gi|574117571|gb|ETV83053.1| hypothetical protein H257_04796 [Aphanomyces astaci]) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 300/424 (70.75%), Postives = 354/424 (83.49%), Query Frame = 0 Query: 29 VEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEG 452 +ED ++F LGV LCE+ AA+GWT+P+ IQQ+++PAAL G+D+IGLAETGSGKTGAF +P+LQ LL PQRLFA+VLAPTRELAFQI E FEALG+SIGLK CVVGG+DMM Q +ALA+KPHVV+ATPGRLVDHLENTKGF +R ++LVLDEADRMLSMDFEEEIN+I+ +MP RRT LFSATMTSKVAKLQRASL PVKVE + KF TP TL Q+YLFIPAKYKDCYLAY LNE AGQ++L+F +TCN QR+ L+LR+LGF AICLHGQMTQP RLGAL+KFK+ QRSIL+ TDVASRGLDIP+VD+VINFDIP++GKDYIHRVGRTARAGRAG +++ VTQYDVE+YQR+E LLG KL Y +E TVL++LERV EAQR A EL+E T G K R G++ EGD D+G Sbjct: 30 IED--KSFLELGVNPALCESIAALGWTRPSKIQQKSLPAALAGKDIIGLAETGSGKTGAFVIPILQDLLLSPQRLFALVLAPTRELAFQISEQFEALGSSIGLKCACVVGGIDMMNQQVALAKKPHVVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIIQLMPN--ERRTYLFSATMTSKVAKLQRASLQSPVKVEITHKFATPETLAQKYLFIPAKYKDCYLAYVLNEFAGQSMLIFASTCNGTQRITLMLRSLGFPAICLHGQMTQPNRLGALNKFKAKQRSILVCTDVASRGLDIPSVDVVINFDIPTNGKDYIHRVGRTARAGRAGIALSFVTQYDVELYQRIEHLLGKKLDTYACEESTVLVMLERVGEAQRAATIELKEETSKGTGKRAR-YGKNHEGDGDDG 448
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|325191409|emb|CCA26186.1| (DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]) HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0 Identity = 299/456 (65.57%), Postives = 358/456 (78.51%), Query Frame = 0 Query: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGG 456 MV N + D E +P D G D QTFE LGV LCEA A++GW+KP+ IQQ+AIP L GRD+IGLAETGSGKTGAF +P+LQ+LL PQRL+A+VLAPTRELA+QI E FEALGASIGLK CVVGG+DMM Q IALARKPH+++ATPGRLVDHLENTKGF +R +FLVLDEADRMLSMDFEEEIN+I+ +MP+ R T LFSATMTSKVAKLQRASL +P+K+E + KF TP L Q YLFIPAK+KDCYL+Y LNE AGQ+IL+F +TCN Q++ L+LRNLGF AICLHGQM+QP RLGAL+KFK+ R IL+ TDVASRGLDIP+VD+V+N+DIP+HGKDYIHRVGRTARAGRAG +++ VTQYDVE+YQR+E LLG KL Y DE+TVLI+ ERV EAQRIA E++EL K G++ R+ + D + G Sbjct: 1 MVGNPQSGDDAESIINPS----GDNCDGFSGD-QTFEQLGVDATLCEAIASLGWSKPSKIQQEAIPHGLAGRDLIGLAETGSGKTGAFVIPILQSLLRSPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQIALARKPHIIIATPGRLVDHLENTKGFSLRTIKFLVLDEADRMLSMDFEEEINQIVQLMPS--ERNTYLFSATMTSKVAKLQRASLLNPIKIEITHKFATPENLRQHYLFIPAKFKDCYLSYILNEVAGQSILIFASTCNGTQKVTLMLRNLGFQAICLHGQMSQPNRLGALNKFKAKTRKILVCTDVASRGLDIPSVDVVMNYDIPTHGKDYIHRVGRTARAGRAGIAVSFVTQYDVELYQRIEFLLGKKLDAYPCDEQTVLIMQERVGEAQRIATNEMKEL----ASKRGKRHDRESDDDNTDAHHGS 445
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|1173961734|gb|OQS07690.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 301/451 (66.74%), Postives = 363/451 (80.49%), Query Frame = 0 Query: 18 DVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGRDGEGDEDEGGEGGREAGGKPLKAGQ 468 +V +D+D E + ++F LGV + E+ A+GW P+ IQQ+ +P AL G D+IGLAETGSGKTGAF +P+LQ LL PQRLFA+VLAPTRELAFQI E FEALGASIGLK CVVGG+DMM Q +ALA+KPH+V+ATPGRLVDHLENTKGF +R ++LVLDEADRMLSMDFEEEIN+I+ +MP RRT LFSATMTSKVAKLQRASL +PVKVE + KF TP TLVQ+YLFIPAKYKDCYLAY LNE AGQ++L+F ATCN Q++ L+LR+LGF AICLHGQM+QP RLGAL+KFK+ QRSIL+ TDVASRGLDIP+VD+VIN+DIP++GKDYIHRVGRTARAGRAG ++++VTQY+VE+YQR+E LLG KL E+K +E TVL++LERV EAQR A EL+E T KG KR R G+ ED+G +G KP KA + Sbjct: 8 EVVVDADE----ELETKSFLELGVDPTIVESITALGWKAPSKIQQKTLPPALAGHDLIGLAETGSGKTGAFVIPILQDLLQSPQRLFALVLAPTRELAFQISEQFEALGASIGLKCACVVGGIDMMNQQVALAKKPHIVIATPGRLVDHLENTKGFSLRTMKYLVLDEADRMLSMDFEEEINQIVQLMPND--RRTYLFSATMTSKVAKLQRASLKNPVKVEITHKFATPDTLVQKYLFIPAKYKDCYLAYILNEYAGQSVLIFAATCNATQKITLMLRSLGFPAICLHGQMSQPNRLGALNKFKAKQRSILVCTDVASRGLDIPSVDVVINYDIPTNGKDYIHRVGRTARAGRAGIALSVVTQYEVELYQRIEHLLGKKLIEFKCEESTVLVMLERVGEAQRAATLELKEET----SKGTGKRSRYGKNHEDDGDDGEGNPTKKPYKAAK 448
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|1214708435|gb|OWZ19719.1| (DEAD/DEAH box RNA helicase [Phytophthora megakarya]) HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0 Identity = 296/424 (69.81%), Postives = 347/424 (81.84%), Query Frame = 0 Query: 20 DLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKGGRKRGR 443 D +++ A G QTF LGV +CEA AA+GW+ P+ IQQQAIP L G+D+IGLAETGSGKTGAF +P+LQ LL PQRL+A+VLAPTRELA+QI E FEALGASIGLK CVVGG+DMM Q +ALARKPHVV+ATPGRLVDHLENTKGF +R +FLVLDEADRMLSMDFEEEIN+I+ +MP R T LFSATMTSKV KLQRASL DPVKVE + KF TP TL Q YLFIPAK+KDCYLAY LNE AGQ++L+F +TCN Q++ L+LRNLGF AICLHGQM QP RLGAL+KFK+ QR++L+ TDVASRGLDIP+VD+VIN+DIP+HGKDYIHRVGRTARAGRAG +++ VTQYDVE+YQR+E LLGTKL Y +EETVL++ ERV+EAQRIA E++E G G KRGR Sbjct: 7 DANNEAADGFSGS-QTFAELGVDSAICEAIAAVGWSAPSKIQQQAIPHGLAGQDLIGLAETGSGKTGAFVIPILQRLLLNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQIVQLMP--PERNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPSRLGALNKFKAKQRNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAVSFVTQYDVELYQRIEHLLGTKLDAYSCEEETVLVMSERVNEAQRIATIEMKETAANG---TGTKRGR 424
BLAST of EWM29212.1 vs. NCBI_GenBank
Match: gi|635371322|emb|CCI40477.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0 Identity = 294/435 (67.59%), Postives = 350/435 (80.46%), Query Frame = 0 Query: 1 MVTNGKKKDGKEKNTHPDVDLDSDPAKGVEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAFALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIALARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSMDFEEEINKILAIMPTGKHRRTLLFSATMTSKVAKLQRASLTDPVKVEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGK 435 M N + DG + ++ D G D QTFE LGV LCEA A++GW+KP+ IQQ+AIP L GRD+IGLAETGSGKTGAF +P+LQ+LL PQRL+A+VLAPTRELA+QI E FEALGASIGLK CVVGG+DMM Q IALARKPH+++ATPGRLVDHLENTKGF +R RFLVLDEADRMLSMDFEEEIN+I+ +MP+ R T LFSATMTSKVAKLQRASL +P+K+E + KF TP L Q YLFIPAK+KDCYL+Y LNE AGQ+IL+F +TCN QR+ L+LRNLGF AICLHGQM+QP RLGAL+KFK+ R IL+ TDVASRGLDIP+VD+V+N+DI +HGKDYIHRVGRTARAGRAG ++++VTQYDVE+YQR+E LLG KL Y DE+TVL++ ERV EAQRIA E++EL GK Sbjct: 1 MSANPPESDGVDSMSNST----GDKCDGFSGD-QTFEQLGVDATLCEAIASLGWSKPSKIQQEAIPHGLAGRDLIGLAETGSGKTGAFVIPILQSLLRSPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQIALARKPHIIIATPGRLVDHLENTKGFSLRTIRFLVLDEADRMLSMDFEEEINQIVQLMPS--ERNTYLFSATMTSKVAKLQRASLLNPIKIEITHKFATPENLRQHYLFIPAKFKDCYLSYILNEVAGQSILIFASTCNGTQRVTLMLRNLGFQAICLHGQMSQPNRLGALNKFKAKSRKILVCTDVASRGLDIPSVDVVMNYDISTHGKDYIHRVGRTARAGRAGIAVSLVTQYDVELYQRIEFLLGKKLDAYPCDEQTVLVMQERVGEAQRIATNEMKELASKRGK 428 The following BLAST results are available for this feature:
BLAST of EWM29212.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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