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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g7.6511.mrna |
| Orig protein id | gnl|cribi|Naga_100007g7.6511 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:947521..949618 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1565 ID=rna1565|Name=rna1565|organism=Nannochloropsis gaditana|type=mRNA|length=2766bp
CGAGGAGGTGTTTTGGTTACTGGACACCATTATTAGGGTGGTATGTGTGT
GTGTGTATTGGGGGGTGTCGCTTTTTAGACCCCGTGACTACGGACCCCGC
GAGAAAACGAATTGACCAAGGGAACACGCGCGCGAGAAATGAGGGTGTAC
GAGACCTTCAGAACATGAATAGTTCTCGGGAGGCCAACCGACGATCGAAG
AATGACATGGATCGATTGAATTAAAACTGTATTTCGACTCCACGTGAGCC
TCCCTTTCTCTGGACTCTCTTGCTTGATATTTGTCGGCTTTCTGTCGCCC
CATCGAGCCGTAGAAATCAGGCCCACGAACAGGGAAGGCACGCACCTTCG
AAAAAGTGCGAAGGTGCGAAGGTGCAGGTGTGAAAAGGTGCGGTGCTGCA
CCTCGAAGGCAAGGTGCGCACCTTTTTTGCCCTTCCCAGCTTTGCGGCCA
TTTTAGATACAACTTTCTCACACTCACGCTCTCACAACATTGTTGAGAAT
GAGAAAGTGCATATTCATCGGAATGCCTTAAAAGAGCAAGAGCAATGGAA
TGACGCTAATATTGGGGTTGTATGTGGAAGTAAAGTGTTTCATGGGTGGG
ATCCAGGATTGACGACTCGGAGTCGCCGAATGGTTAGGGATGTTTTTTTT
TAGCTCAACTTTCTTAACCATCCTTAGCAATGGCGTGAGTGCGAACCCTG
AGCCACGGTACAACGATCCTACAAGGCCGCGTACCCTCCATGCCGTTTTC
GCCTTCCTCCGCATTCACGTGGAGCACTTGACGCGCTTCACGGCCGACGA
AATAAAAATTCTTGTGGAGAGTACCCTTTCGTCCCCGGCTTGGGGCGTAC
GGGTGAGAAATCACACTGCCGAAGCTCGTGGATGTTTTCTTTCCCACCCT
TCAGACGGTTGAGGATGCTTTTCGCGTCCTCTGCGTCTGCGCGGGTTTCG
ATGTGATCCCCCCGTGAGTGCATGCGGCCGCCGCTGCTGCTGTGGAAGTC
AAGCGAGGCGACGTCCGACAGGTCTATGCCGGCGTGGTCTGCGAGCGCAT
TGTGCTGGGCGCTTGCAACGCCGAGCGCCATCTTGCTCCGTGAAAGGCGA
GAACGGGGCAATTTTTAAAGGTTGTACAGGGTCCGGAGAGCAAGACAAAC
ACCGATGATTTCCCCCATTGTGTTGGTCCTCCGGACCATCTCCCGCTGCT
GCTCTCCCAAAGCCGCCTCCTCAATCGAGATCCTTTGCTCTGTAGGGATG
GCGTCCATAAATGAGCGGAACGAGCAACCAGAAATGCATGCACGGAAGGG
TAAGATGTCCAATCATGGATGTGCGCTTACTTGTTCTTTATCACAGCCAC
GTGCTGGAAGAGGGTTTCTATTCCACTGGATGCTACCAGGGCTTTCGTGG
CGCCAACATCCAAGGATGGCGCTATGTAGCCCGCCTCCACCGCCCGGTCC
TGTGTCTAGAAGAGGTGCGTCTGGACGTTGTGAGCATGCACGAACACCAA
GCGGAGTGGGCCTCGAAACAAAAACGCACCATGTCGTCTCCCCCCGATTG
AGTGCGGTTCGCATCGGCCCACTTCTTGCACAGCTGCCACAGGCTCCCGC
CCCAAAAGAACACCTTGAAATCCTGCCCATTGGTAAACTTGTATTCATCG
ACCCACACGATCTGCTCGTGTTGCTTGGGCCGGGGTCGTTCAAAGCTGGA
CCTTCGATTATGATGCGAAGACCAAGCCAGGACTCAAATTTTGTGGCACT
CCGCGCACGGCCAAGTTCCAAGAAGCCCTTGTCCTGTGTACGCTCGTACG
TCACGTTTAGGTCACCGCGGAGTAGAGGCGAATTGTGCTTGTGCGCCTCT
GCATTGCGTTTGTTGACAAGCTCAGGGGAGACGAAGGGCTTGTAGTAGTC
CGGCTCGATGTCGGCGCGGTTAAGGGGGTCGCGTGTACGGACGGGGAGTC
TTCCGGCGTTGTCGGAAAGCGTGTTGTGCGTGTTAGGGGTACGAGGTGTT
GGTATTCGGGCAACAAGGTACAAGGTATTAGAATTGCGTTTGGGTGGAAG
GAGGTGGGAAACGACACATTGACCAAGAAACACTCCCAGGAGGACGTGAT
GTTCCTCCAATTCTGCATCGGCGAAGTTGATCGCATTGTTGATCTTGCCT
TCCTTGTCCGCCGTGTTGCGGGGGTGAAAATTGAGGACATAAACAACGCA
GTCGGTGTCGTCTTCTGTGTCCTTCACGTCGTGAAGAGGGCCGGTCATGC
CATGGCTAGGGAGGTCCTTCCAGCGTCACCACCAGCTTGGTCCTCCCTTT
CGGTCCCCTGGGAGGCATGGCCTTCCACGGCTGAGTGCGTCGTGGCAGCG
TCCGCGAAGTTCATCGTGCGTCGACTGTCGAGGAAGGGTAAGGATATTTG
AGTATAGAGATGAAAGAACCGGCGAGTGCTTTGATGGGCGTGACCAATCA
TTCCCGTGGCGCGATATCGGAGCGTAAAATGCCGTAATGTACGAGCGTGT
GAAATGTACGTGCTTGGTGGCTTGCATGGAGTCCCTCAGACCCCTCTGGA
CGTAGATCAGTCGTGGGGGCCAGAAAATACAAGCCCTGGACCACAAAGCC
ATCTTCCGGCTACAAATACCAAGCAAAAGACCTCCCAGAGTTAGCCATCT
ATCCTTTGCTCAGATCGTTGTACGTTTTCTGGTTGAACGCTGTTGCGGAG
ATTACAATCGCAATCCTATGAGATGCGGGCAAGAAATAGAATCGAATATC
ACCAAAGGTCTGATCA back to topprotein sequence of rna1565 >rna1565-protein ID=rna1565-protein|Name=rna1565|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MTRTTRSRTSSNAAPFQRLGRKEASKGNVLCLSMIYAREDAVPEKDFGQV
WRDRLRLVQLESNGWEVYSCDLSHDESLGVMGRHLQSNFDHRRFQEAFTR
RFPHGLEIRQVIFDYFYIPEHWASQRWGSGRLVTDTIPFLRRTARVREFW
LPNCKVMRELLEEHEEVLVSEGLDWSLVRERWKNVLYVATEQVDGIMQRS
LAEVKTNANQVAAYLDDQYPFIKISPIVLAKPRRYRQEKGRDLKDNQKRS
KVVEGGLKVRYQKGAERNILAPRNHGCIFEEDENPVSR back to topmRNA from alignment at CM002457.1:947521..949618+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1565 ID=rna1565|Name=rna1565|organism=Nannochloropsis gaditana|type=mRNA|length=2098bp|location=Sequence derived from alignment at CM002457.1:947521..949618+ (Nannochloropsis gaditana)
CCAGCTTTGTCGCTCGCATCCAGTCTTGATCCATACGCCGGAGAGACTTT
GTTGGTCAAGCGCAGTCCGTTTCGGcacttttctttttgttTGTGTGCAC
TACATAGAGTGACAGAAATTGTCGTTTGTATGTCATCTTTCTTGTCATCA
AGAAGTCCGTAAGGATGAGCGCGCAGAAGTGTACGTGTCGACGACATCAG
GAGCGCTATAGACATTCCATCGAAAAACCTGTTAAACTAGCCTCTTTCAG
TAACTTCAGCATATGGCGTCCCACCCTTAATGGCCGGACAGTACGTGGCC
CGAATTTCTGCCCCTCTTCATGCCTGTGAGGAACAAGTGTAGGCATGTCC
CTGTCATCCTGACTTCCTCATTGCGATCAGGTAGAGGTGGTCTGTCAATG
AAGAGATCTTCAATATGACGCGAACAACGCGATCAAGGACAAGCTCCAAT
GCCGCTCCTTTTCAGAGACTCGGCCGTAAAGAAGCAAGTAAAGGCAATGT
GCTGTGCTTAAGCATGATCTACGCCAGAGAGGTGAGCGTCCGTGCACGAC
AATCGTGCATTCCCAAGCACGTATATATAGAATATCTTTCCATCGAAAAA
TCAGCCCCATTGTCTCACTACTAAAGTCTTGCGTGCTTGTTCAGGATGCA
GTTCCAGAAAAGGATTTCGGTCAGGTGTGGCGCGATCGCTTGCGCCTTGT
GCAGCTGGAGAGCAACGGATGGGAAGTGTACAGCTGTGATCTATCCCACG
ATGAGTCCTTGGGCGTAATGGGACGGCATCTGCAATCGAATTTCGACCAC
CGTCGATTTCAGGAGGCCTTCACACGACGGTTTCCACATGGCTTGGAGAT
ACGCCAGGTCCGTGACCTGTGTAATGTGACTCTTCAGGTTTTCCCCTCGA
CTACAgcgtttcctttttttttgcgCCTCATCCCGCGCGCCTTTCACAAC
CTCGCACGTGAAGGTCATATTCGACTATTTCTACATCCCCGAGCACTGGG
CCAGTCAGCGTTGGGGCTCCGGCCGCCTCGTCACCGACACAATCCCCTTC
CTGCGCCGCACCGCCAGGGTCCGGGAGTTCTGGCTGCCCAATTGCAAGGT
CATGCGGGagcttttggaggagcacgaggaggtgctggtgtCGGAGGGTC
TTGACTGGAGCCTGGTGCGGGAACGGTGGAAAAACGTCCTGTACGTGGCC
ACGGAGCAAGTGGACGGGATCATGCAAAGGAGCTTGGCCGAGGTGAAGAC
AAATGCGAACCAGGTGCGAGGGGAGAGATAGGAATGATTCTTGTGGCGCC
TGGAGAAGGCAAAGCCAATTAAAATATTTTTGTAACCACAGCACCCAGAC
AAGAAAGTGATGCTTCTCACGCTGCTCGACATCCGCCACCTGTAGGTTGC
TGCCTACCTGGATGACCAGTACCCGTTTATAAAGATAAGCCCCATCGTCC
TCGCCAAGCCGCGTCGCTATCGccaagaaaaggggagggacctCAAGGAC
AATCAAAAACGGAGCAAAGTCGTGGAGGGGGGATTGAAGGTAAGATACCA
GAAAGGAGCAGAGCGTAACATTCTCGCACCGAGGAATCATGGCTGTATAt
tcgaggaggatgagaaccCCGTCAGCCGTTAGGGATTGCCTTAAAGTCCG
GTAGTAGACCGCACTGTTTTCTGTAGGATGGCTCTCGCCTGACCGATGGC
TTTGCCGCATGCAACATTGGTATTTATACATGGAAAGGTGGTTCTGCTAT
TTTCAACATTAGGTAGAAAGCATCATGGAAAATAGCCTGAAAGGCTTCAG
GACCAACGACCTGATATTATTTTCTCTTACAGTAGCATTGTATTACGTTA
CCTTTCGTGCTTTTCCAGGACAACCTACAGCCGTAGAAAAATCACAATAT
TTCACCCCACCCGCTCCCTTTTACTTCTGTACATGGTGCAAGTATCCACA
AGCGTCTGTGTCATGACGAGCTCATGAGCTCGACGAGGTCCGTCTTATTG
CCGCAAGTCGATTCTTCTGATCCTGTGTgagctccttcttctttttcgcc
GCGGCGTTCTCTGCCTTTGTGCGTGCACTAACTTTTTCTGTTCTAGTC back to topCoding sequence (CDS) from alignment at CM002457.1:947521..949618+ >rna1565 ID=rna1565|Name=rna1565|organism=Nannochloropsis gaditana|type=CDS|length=3468bp|location=Sequence derived from alignment at CM002457.1:947521..949618+ (Nannochloropsis gaditana)
ATGACGCGAACAACGCGATCAAGGACAAGCTCCAATGCCGCTCCTTTTCA
GAGACTCGGCCGTAAAGAAGCAAGTAAAGGCAATGTGCTGTGCTTAAGCA
TGATCTACGCCAGAGAGGATGCAGTTCCAGAAAAGGATTTCGGTCAGGTG
TGGCGCGATCGCTTGCGCCTTGTGCAGCTGGAGAGCAACGGATGGGAAGT
GTACAGCTGTGATCTATCCCACGATGAGTCCTTGGGCGTAATGGGACGGC
ATCTGCAATCGAATTTCGACCACCGTCGATTTCAGGAGGCCTTCACACGA
CGGTTTCCACATGGCTTGGAGATACGCCAGGTCATATTCGACTATTTCTA
CATCCCCGAGCACTGGGCCAGTCAGCGTTGGGGCTCCGGCCGCCTCGTCA
CCGACACAATCCCCTTCCTGCGCCGCACCGCCAGGGTCCGGGAGTTCTGG
CTGCCCAATTGCAAGGTCATGCGGGagcttttggaggagcacgaggaggt
gctggtgtCGGAGGGTCTTGACTGGAGCCTGGTGCGGGAACGGTGGAAAA
ACGTCCTGTACGTGGCCACGGAGCAAGTGGACGGGATCATGCAAAGGAGC
TTGGCCGAGGTGAAGACAAATGCGAACCAGGTTGCTGCCTACCTGGATGA
CCAGTACCCGTTTATAAAGATAAGCCCCATCGTCCTCGCCAAGCCGCGTC
GCTATCGccaagaaaaggggagggacctCAAGGACAATCAAAAACGGAGC
AAAGTCGTGGAGGGGGGATTGAAGGTAAGATACCAGAAAGGAGCAGAGCG
TAACATTCTCGCACCGAGGAATCATGGCTGTATAttcgaggaggatgaga
accCCGTCAGCCGTTAGATGACGCGAACAACGCGATCAAGGACAAGCTCC
AATGCCGCTCCTTTTCAGAGACTCGGCCGTAAAGAAGCAAGTAAAGGCAA
TGTGCTGTGCTTAAGCATGATCTACGCCAGAGAGGATGCAGTTCCAGAAA
AGGATTTCGGTCAGGTGTGGCGCGATCGCTTGCGCCTTGTGCAGCTGGAG
AGCAACGGATGGGAAGTGTACAGCTGTGATCTATCCCACGATGAGTCCTT
GGGCGTAATGGGACGGCATCTGCAATCGAATTTCGACCACCGTCGATTTC
AGGAGGCCTTCACACGACGGTTTCCACATGGCTTGGAGATACGCCAGGTC
ATATTCGACTATTTCTACATCCCCGAGCACTGGGCCAGTCAGCGTTGGGG
CTCCGGCCGCCTCGTCACCGACACAATCCCCTTCCTGCGCCGCACCGCCA
GGGTCCGGGAGTTCTGGCTGCCCAATTGCAAGGTCATGCGGGagcttttg
gaggagcacgaggaggtgctggtgtCGGAGGGTCTTGACTGGAGCCTGGT
GCGGGAACGGTGGAAAAACGTCCTGTACGTGGCCACGGAGCAAGTGGACG
GGATCATGCAAAGGAGCTTGGCCGAGGTGAAGACAAATGCGAACCAGGTT
GCTGCCTACCTGGATGACCAGTACCCGTTTATAAAGATAAGCCCCATCGT
CCTCGCCAAGCCGCGTCGCTATCGccaagaaaaggggagggacctCAAGG
ACAATCAAAAACGGAGCAAAGTCGTGGAGGGGGGATTGAAGGTAAGATAC
CAGAAAGGAGCAGAGCGTAACATTCTCGCACCGAGGAATCATGGCTGTAT
AttcgaggaggatgagaaccCCGTCAGCCGTTAGATGACGCGAACAACGC
GATCAAGGACAAGCTCCAATGCCGCTCCTTTTCAGAGACTCGGCCGTAAA
GAAGCAAGTAAAGGCAATGTGCTGTGCTTAAGCATGATCTACGCCAGAGA
GGATGCAGTTCCAGAAAAGGATTTCGGTCAGGTGTGGCGCGATCGCTTGC
GCCTTGTGCAGCTGGAGAGCAACGGATGGGAAGTGTACAGCTGTGATCTA
TCCCACGATGAGTCCTTGGGCGTAATGGGACGGCATCTGCAATCGAATTT
CGACCACCGTCGATTTCAGGAGGCCTTCACACGACGGTTTCCACATGGCT
TGGAGATACGCCAGGTCATATTCGACTATTTCTACATCCCCGAGCACTGG
GCCAGTCAGCGTTGGGGCTCCGGCCGCCTCGTCACCGACACAATCCCCTT
CCTGCGCCGCACCGCCAGGGTCCGGGAGTTCTGGCTGCCCAATTGCAAGG
TCATGCGGGagcttttggaggagcacgaggaggtgctggtgtCGGAGGGT
CTTGACTGGAGCCTGGTGCGGGAACGGTGGAAAAACGTCCTGTACGTGGC
CACGGAGCAAGTGGACGGGATCATGCAAAGGAGCTTGGCCGAGGTGAAGA
CAAATGCGAACCAGGTTGCTGCCTACCTGGATGACCAGTACCCGTTTATA
AAGATAAGCCCCATCGTCCTCGCCAAGCCGCGTCGCTATCGccaagaaaa
ggggagggacctCAAGGACAATCAAAAACGGAGCAAAGTCGTGGAGGGGG
GATTGAAGGTAAGATACCAGAAAGGAGCAGAGCGTAACATTCTCGCACCG
AGGAATCATGGCTGTATAttcgaggaggatgagaaccCCGTCAGCCGTTA
GATGACGCGAACAACGCGATCAAGGACAAGCTCCAATGCCGCTCCTTTTC
AGAGACTCGGCCGTAAAGAAGCAAGTAAAGGCAATGTGCTGTGCTTAAGC
ATGATCTACGCCAGAGAGGATGCAGTTCCAGAAAAGGATTTCGGTCAGGT
GTGGCGCGATCGCTTGCGCCTTGTGCAGCTGGAGAGCAACGGATGGGAAG
TGTACAGCTGTGATCTATCCCACGATGAGTCCTTGGGCGTAATGGGACGG
CATCTGCAATCGAATTTCGACCACCGTCGATTTCAGGAGGCCTTCACACG
ACGGTTTCCACATGGCTTGGAGATACGCCAGGTCATATTCGACTATTTCT
ACATCCCCGAGCACTGGGCCAGTCAGCGTTGGGGCTCCGGCCGCCTCGTC
ACCGACACAATCCCCTTCCTGCGCCGCACCGCCAGGGTCCGGGAGTTCTG
GCTGCCCAATTGCAAGGTCATGCGGGagcttttggaggagcacgaggagg
tgctggtgtCGGAGGGTCTTGACTGGAGCCTGGTGCGGGAACGGTGGAAA
AACGTCCTGTACGTGGCCACGGAGCAAGTGGACGGGATCATGCAAAGGAG
CTTGGCCGAGGTGAAGACAAATGCGAACCAGGTTGCTGCCTACCTGGATG
ACCAGTACCCGTTTATAAAGATAAGCCCCATCGTCCTCGCCAAGCCGCGT
CGCTATCGccaagaaaaggggagggacctCAAGGACAATCAAAAACGGAG
CAAAGTCGTGGAGGGGGGATTGAAGGTAAGATACCAGAAAGGAGCAGAGC
GTAACATTCTCGCACCGAGGAATCATGGCTGTATAttcgaggaggatgag
aaccCCGTCAGCCGTTAG back to top
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