EWM29138.1, cds1560 (CDS) Nannochloropsis gaditana

Overview
NameEWM29138.1
Unique Namecds1560
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:945597..946337 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29138.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100007g9.6465.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:945597..946337 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29138.1 vs. NCBI_GenBank
Match: gi|585111658|gb|EWM29138.1| (hypothetical protein Naga_100007g9 [Nannochloropsis gaditana])

HSP 1 Score: 489.96 bits (1260), Expect = 6.042e-175
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 
Query:    1 MISPIVLVLRTISRCCSPKAASSIEILCSVGMASINERNEQPEMHARKGKMSNHGCALTCSLSQPRAGRGFLFHWMLPGLSWRQHPRMALCSPPPPPGPVSRRGASGRCEHARTPSGVGLETKTHHVVSPRLSAVRIGPLLAQLPQAPAPKEHLEILPIGKLVFIDPHDLLVLLGPGSFKAGPSIMMRRPSQDSNFVALRARPSSKKPLSCVRSYVTFRSPRSRGELCLCASALRLLTSSGETKGL 246
            MISPIVLVLRTISRCCSPKAASSIEILCSVGMASINERNEQPEMHARKGKMSNHGCALTCSLSQPRAGRGFLFHWMLPGLSWRQHPRMALCSPPPPPGPVSRRGASGRCEHARTPSGVGLETKTHHVVSPRLSAVRIGPLLAQLPQAPAPKEHLEILPIGKLVFIDPHDLLVLLGPGSFKAGPSIMMRRPSQDSNFVALRARPSSKKPLSCVRSYVTFRSPRSRGELCLCASALRLLTSSGETKGL
Sbjct:    1 MISPIVLVLRTISRCCSPKAASSIEILCSVGMASINERNEQPEMHARKGKMSNHGCALTCSLSQPRAGRGFLFHWMLPGLSWRQHPRMALCSPPPPPGPVSRRGASGRCEHARTPSGVGLETKTHHVVSPRLSAVRIGPLLAQLPQAPAPKEHLEILPIGKLVFIDPHDLLVLLGPGSFKAGPSIMMRRPSQDSNFVALRARPSSKKPLSCVRSYVTFRSPRSRGELCLCASALRLLTSSGETKGL 246
The following BLAST results are available for this feature:
BLAST of EWM29138.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111658|gb|EWM29138.1|6.042e-175100.00hypothetical protein Naga_100007g9 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1564rna1564Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications