EWM29205.1, cds1550 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|585111725|gb|EWM29205.1| (protein kinase c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 449.899 bits (1156), Expect = 4.118e-160 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
Query: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPASHLHRWDGRLDDLQLIFSACPDLHCRYLGCLRTLE 217
MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPASHLHRWDGRLDDLQLIFSACPDLHCRYLGCLRTLE
Sbjct: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPASHLHRWDGRLDDLQLIFSACPDLHCRYLGCLRTLE 217
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|585111726|gb|EWM29206.1| (protein kinase c binding protein [Nannochloropsis gaditana]) HSP 1 Score: 359.377 bits (921), Expect = 8.033e-125 Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0
Query: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQ P
Sbjct: 1 MSQRLVRLSQHLLVHRTSLHATSIAVRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQMGWPPG 182
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|552847308|ref|XP_005851832.1| (hypothetical protein CHLNCDRAFT_133322 [Chlorella variabilis] >gi|307111496|gb|EFN59730.1| hypothetical protein CHLNCDRAFT_133322 [Chlorella variabilis]) HSP 1 Score: 172.94 bits (437), Expect = 7.111e-52 Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
D G PT+FDKI+ K+IP+ IYED+ +AF D+SPQGPVHFLVIPK R GL++LSKA+E HK LLGHLLYVA QVAKQEGL G+RV INDGP+G QSVYHLH+H+IGGRQ P
Sbjct: 16 DTGAPTIFDKIIAKQIPAQIIYEDEQALAFRDISPQGPVHFLVIPKVRNGLTQLSKAKEEHKPLLGHLLYVAAQVAKQEGLS-QGYRVAINDGPNGCQSVYHLHLHIIGGRQMSWPPG 132
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|302828612|ref|XP_002945873.1| (hypothetical protein VOLCADRAFT_102824 [Volvox carteri f. nagariensis] >gi|300268688|gb|EFJ52868.1| hypothetical protein VOLCADRAFT_102824, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 171.785 bits (434), Expect = 7.565e-51 Identity = 83/110 (75.45%), Postives = 94/110 (85.45%), Query Frame = 0
Query: 68 EP-TVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQ 176
EP T+FDKIV KEIP+N IYEDD+ +AF D+SPQ PVHFLVIPK R+GL+RLSKA E HKALLGHLLYVAQ VA +E L GFRVVINDGP+G QSVYHLH+HV+GGRQ
Sbjct: 50 EPLTIFDKIVSKEIPANVIYEDDEALAFRDISPQAPVHFLVIPKKRSGLTRLSKATEGHKALLGHLLYVAQLVAMKENL-GEGFRVVINDGPNGCQSVYHLHLHVMGGRQ 158
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|255084700|ref|XP_002504781.1| (predicted protein [Micromonas commoda] >gi|226520050|gb|ACO66039.1| predicted protein [Micromonas commoda]) HSP 1 Score: 168.318 bits (425), Expect = 3.070e-50 Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 0
Query: 64 ADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
A++GEPT+FDKI+ KEIPS+ IYED+ C+AF D++PQ HFLVIPK R+GL++LSKAEE HK LLGHLLY AQ+VAKQE L GFRVVINDG +G QSVYHLHIHV+GG+Q P
Sbjct: 2 ANSGEPTIFDKIIAKEIPSDVIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKL-DKGFRVVINDGVEGCQSVYHLHIHVVGGQQLSWPPG 119
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|1004144108|gb|KXZ52089.1| (hypothetical protein GPECTOR_10g1112 [Gonium pectorale]) HSP 1 Score: 167.548 bits (423), Expect = 9.102e-50 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
D PT+FDKIV K+IP+ IYEDD +AF D+SPQ PVHFLVIPK+R+GL+RLSKA E HKALLGHLL+VAQ+VA E L GFRV INDGP+G QSVYHLH+HV+GGRQ P
Sbjct: 17 DQDPPTIFDKIVAKQIPATIIYEDDQALAFRDISPQAPVHFLVIPKNRSGLTRLSKATEEHKALLGHLLFVAQKVAMAENLGE-GFRVTINDGPNGCQSVYHLHLHVMGGRQLTWPPG 133
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|159476202|ref|XP_001696200.1| (protein kinase C binding protein [Chlamydomonas reinhardtii] >gi|158282425|gb|EDP08177.1| protein kinase C binding protein [Chlamydomonas reinhardtii]) HSP 1 Score: 166.777 bits (421), Expect = 2.133e-49 Identity = 78/118 (66.10%), Postives = 92/118 (77.97%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
D PT+FDKIV KEIP+N IYEDD+ +AF D+ PQ PVHFLVIPK R GL+RLSKA HKALLGHL++VAQ VA +E L GFRVV+NDGP+G QSVYHLH+H++GGRQ P
Sbjct: 16 DTEPPTIFDKIVSKEIPANIIYEDDEALAFRDIQPQAPVHFLVIPKKRNGLTRLSKASPEHKALLGHLMWVAQHVAMKENLG-DGFRVVVNDGPNGCQSVYHLHLHIMGGRQLTWPPG 132
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|1200531145|gb|OUW43830.1| (histidine triad nucleotide-binding protein [bacterium TMED181]) HSP 1 Score: 165.622 bits (418), Expect = 3.238e-49 Identity = 80/119 (67.23%), Postives = 96/119 (80.67%), Query Frame = 0
Query: 64 ADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
A++GE T+FDKI+ KEIPS+ IYED+ C+AF D++PQ HFLVIPK R+GL++LSKAEE HK LLGHLLY AQ+VAKQE L GFRVVINDG +G QSVYHLHIHV+GG+Q P
Sbjct: 2 ANSGEATIFDKIIAKEIPSDIIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKL-DQGFRVVINDGVEGCQSVYHLHIHVVGGQQLSWPPG 119
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|303283059|ref|XP_003060821.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226458292|gb|EEH55590.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 165.236 bits (417), Expect = 5.891e-49 Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0
Query: 65 DAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
++GEPT+FDKIV KEIP+ IYED+ C+AF D++PQ HFLVIPK RAGL+RLS AEE HKALLGHLL+ AQ+VAK EGL GFRVVINDG G QSVYHLH+HV+GG+Q P
Sbjct: 3 NSGEPTIFDKIVAKEIPATVIYEDNLCLAFRDVAPQAKTHFLVIPKIRAGLTRLSNAEEEHKALLGHLLFTAQRVAKDEGLGE-GFRVVINDGVQGCQSVYHLHLHVLGGQQLTWPPG 119
BLAST of EWM29205.1 vs. NCBI_GenBank
Match: gi|116792646|gb|ABK26444.1| (unknown [Picea sitchensis] >gi|148910222|gb|ABR18192.1| unknown [Picea sitchensis] >gi|224284605|gb|ACN40035.1| unknown [Picea sitchensis]) HSP 1 Score: 164.851 bits (416), Expect = 2.612e-48 Identity = 85/157 (54.14%), Postives = 108/157 (68.79%), Query Frame = 0
Query: 26 VRLSRTTRRCLVTGNQANTMADEVAESRKAAAKKMEEAADAGEPTVFDKIVKKEIPSNFIYEDDDCVAFHDLSPQGPVHFLVIPKDRAGLSRLSKAEESHKALLGHLLYVAQQVAKQEGLVPGGFRVVINDGPDGSQSVYHLHIHVIGGRQNMCTPA 182
+RL VT NQA+ MA E K AA + D G+PT+FDKI++KEIPS +YED+ +AF D++PQ P H ++IPK R GL+ LS+AEE H+ +LGHLLY A+ +AKQEGL GFR+VINDGP G QSVYHLHIH++GGRQ P
Sbjct: 11 LRLKVLGSHLGVTFNQAHHMASE-----KEAA--LAATPDDGKPTIFDKILQKEIPSTVVYEDEKVLAFRDIAPQAPTHIIIIPKVRDGLTGLSQAEERHEDILGHLLYTAKVIAKQEGL-SDGFRIVINDGPSGCQSVYHLHIHLLGGRQMNWPPG 159 The following BLAST results are available for this feature:
BLAST of EWM29205.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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