EWM29218.1, cds1492 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|585111738|gb|EWM29218.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 875.159 bits (2260), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0
Query: 1 MTSTASLACGACTAAVLVCLTTGDGVATRHIDANVGNRRTSAFLPVMPPMGTPVTGRIRSHPLEAHKMYYVCQGGTRLSQRRHERLGTRTAVMVVKTDVEISDKRDVDPEVGSSSKSTDHTGVSRFGSAMPKSAEGVGPPPAPQDNFKHKSLAGVPTDYGPYLTIKGFKINAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENIPDGPAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQCESTSKETGGA 422
MTSTASLACGACTAAVLVCLTTGDGVATRHIDANVGNRRTSAFLPVMPPMGTPVTGRIRSHPLEAHKMYYVCQGGTRLSQRRHERLGTRTAVMVVKTDVEISDKRDVDPEVGSSSKSTDHTGVSRFGSAMPKSAEGVGPPPAPQDNFKHKSLAGVPTDYGPYLTIKGFKINAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENIPDGPAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQCESTSKETGGA
Sbjct: 1 MTSTASLACGACTAAVLVCLTTGDGVATRHIDANVGNRRTSAFLPVMPPMGTPVTGRIRSHPLEAHKMYYVCQGGTRLSQRRHERLGTRTAVMVVKTDVEISDKRDVDPEVGSSSKSTDHTGVSRFGSAMPKSAEGVGPPPAPQDNFKHKSLAGVPTDYGPYLTIKGFKINAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENIPDGPAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQCESTSKETGGA 422
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|873225768|emb|CEM23232.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 221.09 bits (562), Expect = 5.445e-65 Identity = 113/267 (42.32%), Postives = 164/267 (61.42%), Query Frame = 0
Query: 163 LTIKGFKINAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDK----LDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENIP--DGPAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAF-KMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQCESTSKETGGA 422
+I G +NAFG + + W+I WA+ L+V +LE D+ LDP R ++D + LWG+ + +S+P + EN+P + V+VANHASWMD+P LP K++AKA+L KVPILG ++ ++ V+++RDDKRSQ++A R ILKTG PLFVFPEGTR G+++ F K GAFK+A + +P+VPV+I GTH MMP ++P G +H+HP I T T+ +L + ++ I ALP QQ +T A
Sbjct: 19 FSIGGLSVNAFGVLYFIETLFWSIWWALGLLVCGGVLELSDRAGLTLDPARRSIDALNRLWGFFMLTTINSMPVIVNPENLPPNNETCVYVANHASWMDIPAVGMLPRFYKFVAKAELLKVPILGLSIMLSDQVILERDDKRSQIKAYRQCQQILKTGYPLFVFPEGTRSRDGRLKPFGKGGAFKLAQQMNLPVVPVTIEGTHAMMPPTALVPLKPAAGTVKLHIHPKIHPTGFTEDQLREYVWRQIGSALPESQQPLKDDLDTNEA 285
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|1210530127|dbj|GAX11235.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Fistulifera solaris]) HSP 1 Score: 181.415 bits (459), Expect = 8.337e-50 Identity = 101/281 (35.94%), Postives = 156/281 (55.52%), Query Frame = 0
Query: 142 APQDNFKHKSLAGVPTDYGPYLTIKGFK-----INAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWG--WLTSLSTDSLPEMTG-LENIPDG--PAVFVANHASWMDVPYSAQL--PVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQ 410
A QD+ + +S + P +T+ K +NAFG + +++ A W + + + K + DP R D++ +W WL T+S+P +G +E++ G P ++VANHASW+D+P + PV K++AK +L VP +G ++ H+++DR+DKRSQ+ + L LK G P+ FPEG R G++ FK G F +ATKAGVPI+P++I+ H +MP + P GRG +HVHPAI S RT+ EL +L LP +Q
Sbjct: 39 AEQDDHRKQSYFLTLEEINPIITLNKDKSSMKVVNAFGLWCAVVSLTLAPIWTLAMSMVKMAHNMNEDFDPQRAIYDKTGKIWAKSWLAL--TNSVPTYSGEIESLRQGQGPCLYVANHASWLDIPILCTVLDPV-FKFIAKGELKNVPCIGQQLTGGDHIIIDREDKRSQLRTFKDGLNWLKNGVPIMAFPEGKRSQDGRLMDFKGGLFSMATKAGVPIIPITISHAHAVMPSVSLFPVQPGRGKLHLHVHPAIDSAGRTEAELQELVRAAFLSQLPEDQ 316
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|1210527909|dbj|GAX13440.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Fistulifera solaris]) HSP 1 Score: 179.489 bits (454), Expect = 5.142e-49 Identity = 100/279 (35.84%), Postives = 154/279 (55.20%), Query Frame = 0
Query: 144 QDNFKHKSLAGVPTDYGPYLTIKGFK-----INAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWG--WLTSLSTDSLPEMTG-LENIPDG--PAVFVANHASWMDVPYSAQL--PVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQ 410
QD+ + S + P +T+ K +NAFG + +++ A W + + + K + DP R D++ +W WL T+S+P +G +E++ G P ++VANHASW+D+P + PV K++AK +L VP +G ++ H+++DR+DKRSQ+ + L LK G P+ FPEG R G++ FK G F +ATKAGVPI+P++I+ H +MP + P GRG +HVHPAI S RT+ EL +L LP +Q
Sbjct: 42 QDDHRKHSYFLSLEEINPIITLNKDKSSIKVVNAFGLWCAVVSLTLAPIWTLAMSMVKMAHNMNEDFDPQRAIYDKTGKIWAKSWLAL--TNSIPTYSGEIESLRQGQGPCLYVANHASWLDIPILCTVLDPV-FKFIAKGELKNVPCIGQQLTGGDHIIIDREDKRSQLRTFKDGLNWLKNGVPIMAFPEGKRSQDGRLMDFKGGLFSMATKAGVPIIPITISHAHAVMPSVSLFPVQPGRGKLHLHVHPAIDSAGRTEAELQELVKAAFLSQLPEDQ 317
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|551643845|ref|XP_005824715.1| (hypothetical protein GUITHDRAFT_77798 [Guillardia theta CCMP2712] >gi|428168795|gb|EKX37735.1| hypothetical protein GUITHDRAFT_77798 [Guillardia theta CCMP2712]) HSP 1 Score: 162.155 bits (409), Expect = 3.194e-44 Identity = 85/186 (45.70%), Postives = 117/186 (62.90%), Query Frame = 0
Query: 229 SLPEMTGLENIP--DGPAVFVANHASWMDVP-YSAQLPVRAKY-LAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQ 410
S PE+ GLEN+P D + ANH SW DVP L R + AKA+L KVP+LG M A+H+L+ R+ ++SQ+E+L+SA+ L +F+FPEGTR GK++ FK GAF +A K+GV IVPV++ G ++ P +MP C GRGI + VHPAI +TD+EL + I ALP E+
Sbjct: 14 SAPEVEGLENLPPKDETVLVAANHMSWFDVPVLHGFLAGRLLWSFAKAELVKVPVLGTYMQTAEHILISRESRKSQLESLKSAIKTLSLSRNVFIFPEGTRSLDGKLRHFKGGAFTIARKSGVKIVPVTLIGNDVVFPANALMPLCPGRGIMKMVVHPAIDPEGKTDEELMEETRVAIASALPAEK 199
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|219110283|ref|XP_002176893.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411428|gb|EEC51356.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 163.31 bits (412), Expect = 2.080e-42 Identity = 89/249 (35.74%), Postives = 134/249 (53.82%), Query Frame = 0
Query: 170 INAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNVDRSSSLWG--WLTSLSTDSLPEMTG-LENIP--DGPAVFVANHASWMDVPYSAQL--PVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQ 411
+N FG + +++ W + +A+ + DP R D++ +W WLT TDS P +G ++ + GP ++VANHASW+D+P + PV K++AK +L KVP +G + H+L+DR+D+RSQ+ + + LK G P+ FPEG R GK+ FK G F +A K VPIVP++I+ TH +MP + P G G +HVH I +T +T+ EL L LP Q
Sbjct: 84 VNGFGLWCAAVSVFTGPLWVAAMSTLQAIYKINADWDPNRALYDKTGKIWSKTWLTL--TDSYPTFSGDVDRLKSSQGPCLYVANHASWLDIPVICTVLDPV-FKFIAKGELRKVPCIGQQLEGGNHILIDREDRRSQLRTFKDGIGWLKKGVPIMAFPEGMRSRDGKLMDFKGGLFSMAVKTQVPIVPITISHTHAVMPSNALFPVQTGAGKLHVHVHDPIDTTGKTEAELGALVRASFLSTLPLGQH 329
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|544210841|ref|XP_005535821.1| (1-acylglycerol-3-phosphate O-acyltransferase [Cyanidioschyzon merolae strain 10D] >gi|449016133|dbj|BAM79535.1| 1-acylglycerol-3-phosphate O-acyltransferase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 160.999 bits (406), Expect = 8.569e-42 Identity = 90/242 (37.19%), Postives = 137/242 (56.61%), Query Frame = 0
Query: 169 KINAFGFFFCFMAILWAIPWAVFLVVYKALLEFVDKLDPCRYNV-DRSSSLWGWLTSLSTDSLPEMTGLENI--PDGPAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALP 407
+IN G FF + W++P + +++ L FV LDP R V D + LW L+ LST P + G EN+ PD ++V NH S++D+ A L K+++K + +PI+G AM MA+ + ++RD +R Q+ R + L+ G L +FPEGTR G ++AFK G F+VA +AGVPIVP++I GT +MP + P + + +HPAI + D + +L + A I ALP
Sbjct: 129 RINLVGVFFLLVTFAWSLPLFIIMLI---LYPFVLILDPYRARVYDWIAMLWMRLSMLSTGIHPRVVGTENLLPPDATVLYVCNHNSYLDIYTVAFLGRFFKFVSKRSIFAIPIIGWAMGMARQIGIERDSRRDQLRVFREMVSRLEHGVSLLLFPEGTRSKDGTLRAFKQGPFRVAKQAGVPIVPLTITGTAEVMPPWALAPLRWPKQRITLTIHPAIQTADHSVTDLIEAARTAIASALP 367
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|1210512542|dbj|GAX28399.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Fistulifera solaris]) HSP 1 Score: 157.147 bits (396), Expect = 9.628e-41 Identity = 99/308 (32.14%), Postives = 163/308 (52.92%), Query Frame = 0
Query: 114 SSKSTDHTGVS-RFGSAMPKSAEGVGPPPAPQDNFKHKS-LAGVPTDYGPYLTIKGFKINAFGFFFCFMAILWAIPWAVFLVVYKALLEFV-DKLDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENI----PDGP-AVFVANHASWMDVPY-SAQLPVR-AKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQ 411
S++ T HT S F +A +E V + D + + + + T YG +N FG ++ +A+ IPW + + + + + ++ D R + +WG L T P+M GL+ + +G A+FVANH+SWMD+PY A + R K ++K +L +VPILG A+ + ++LVDR D++SQ+ L+ + L+ G L +PEGTR G++ FK GAFK+A KAG P++P+SI G MP + P G ++ + VH I S +T++EL++ + L + Q+
Sbjct: 30 STQQTFHTRQSPLFSAAAAVGSEDVSIKESKWDRVRREGGIFSIHTKYG--------GLNPFGLWYGVVAVTLGIPWYIAMTICQIFYKLTGERFDRLRRIPIFITQIWGTLLLRLTHCYPKMEGLDILRKFYKEGRCAMFVANHSSWMDIPYLGATIGWRNYKLISKKELQRVPILGKAIKVGGNILVDRQDRKSQLLTLKKGIQYLQDGVHLCTYPEGTRTRTGRLMPFKNGAFKMAHKAGAPVIPISIVGADKSMPIHWMFPYRPGHPVSRVVVHEPIESKGKTEEELAEAVRSAMISGLDDYQK 329
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|1210521995|dbj|GAX19430.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Fistulifera solaris]) HSP 1 Score: 152.91 bits (385), Expect = 4.027e-39 Identity = 86/250 (34.40%), Postives = 141/250 (56.40%), Query Frame = 0
Query: 170 INAFGFFFCFMAILWAIPWAVFLVVYKALLEFV-DKLDPCRYNVDRSSSLWGWLTSLSTDSLPEMTGLENI----PDGP-AVFVANHASWMDVPY-SAQLPVR-AKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQ 411
+N FG ++ +A+ IPW + + + + + ++ D R + +WG L T P+M GL+ + +G A+FVANH+SWMD+PY A + R K ++K +L +VPILG A+ + ++LVDR D++SQ+ L+ + L+ G L +PEGTR G++ FK GAFK+A KAG P++P+SI G MP + P G ++ + VH I S +T++EL++ + L + Q+
Sbjct: 85 LNPFGLWYGVVAVTLGIPWYIAMTICQIFYKLTGERFDRLRRIPIFITQIWGTLLLRLTHCYPKMEGLDILRKFYKEGRCAMFVANHSSWMDIPYLGATIGWRNYKLISKKELQRVPILGKAIKVGGNILVDRQDRKSQLMTLKKGIQYLQDGVHLCTYPEGTRTRTGRLMPFKNGAFKMAHKAGAPVIPISIVGADKSMPIHWMFPFRPGHPVSRVVVHEPIESKGKTEEELAEAVRSALISGLDDYQK 334
BLAST of EWM29218.1 vs. NCBI_GenBank
Match: gi|546303672|ref|XP_005712092.1| (1-acyl-sn-glycerol-3-phosphate acyltransferase [Chondrus crispus] >gi|507108463|emb|CDF32427.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Chondrus crispus]) HSP 1 Score: 148.288 bits (373), Expect = 1.614e-38 Identity = 77/194 (39.69%), Postives = 114/194 (58.76%), Query Frame = 0
Query: 231 PEMTGLENIPDG--PAVFVANHASWMDVPYSAQLPVRAKYLAKADLTKVPILGNAMSMAQHVLVDRDDKRSQMEALRSALLILKTGTPLFVFPEGTRGPGGKMQAFKMGAFKVATKAGVPIVPVSIAGTHIMMPKEVIMPQCAGRGITAIHVHPAIPSTDRTDQELSDLAFKIINDALPNEQQCESTSKETGGA 422
P + N+P P V+VANH+S++D+ A L R KY++KA++ K+PI+G AM MA ++ + R ++R QMEA R + ++K G L +FPEGTR GKM+ F+ G F+ A K PIVPV+I GT +MP +P ++ VHP + + +R+ EL D A++ I+ ALP E Q K A
Sbjct: 38 PNIVNAHNLPPKGTPVVYVANHSSYLDIFSFAYLRRRIKYVSKAEIFKLPIVGWAMEMAGNIALRRMNRRGQMEAYRKMVAVVKNGLSLVIFPEGTRSASGKMRKFQSGGFRAAKKQNAPIVPVTILGTREVMPAHAWVPLRYPTKPISLVVHPPLDTANRSVHELQDCAYEAIDSALPPEAQTRPLIKHAKNA 231 The following BLAST results are available for this feature:
BLAST of EWM29218.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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