EWM29227.1, cds1442 (CDS) Nannochloropsis gaditana

Overview
NameEWM29227.1
Unique Namecds1442
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:650991..651960 -
Alignment locationCM002457.1:650579..650838 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29227.1
Productelectron transfer flavoprotein
Orig transcript idgnl|cribi|Naga_100203g10.2711.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:650991..651960 -
CM002457.1supercontigCM002457.1:650579..650838 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR018206ETF_asu_C_CS
IPR014731ETF_asu_C
IPR029035DHS-like_NAD/FAD-binding_dom
IPR014729Rossmann-like_a/b/a_fold
IPR014730ETF_a/b_N
Homology
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|585111748|gb|EWM29227.1| (electron transfer flavoprotein [Nannochloropsis gaditana])

HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MGAAERRTRNSHTHEYAWTHFLVFTGTHFLANEYRVQAPGDEIASYPVCPSQPVGRPVDLTHLNTMLRRPLLTVSAQPRRFVGVLMSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            MGAAERRTRNSHTHEYAWTHFLVFTGTHFLANEYRVQAPGDEIASYPVCPSQPVGRPVDLTHLNTMLRRPLLTVSAQPRRFVGVLMSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV
Sbjct:    1 MGAAERRTRNSHTHEYAWTHFLVFTGTHFLANEYRVQAPGDEIASYPVCPSQPVGRPVDLTHLNTMLRRPLLTVSAQPRRFVGVLMSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|698814094|ref|XP_009840076.1| (hypothetical protein H257_14051 [Aphanomyces astaci] >gi|574104837|gb|ETV70364.1| hypothetical protein H257_14051 [Aphanomyces astaci])

HSP 1 Score: 379.793 bits (974), Expect = 1.801e-127
Identity = 199/324 (61.42%), Postives = 242/324 (74.69%), Query Frame = 0
Query:   86 MSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
             SR  +R ASTLVVAEH+     L+  TL  ITAA ++   +TVLV+G    N +A++AA V GV  VL A+ A ++  IAE LS  VV   K  ++SHI+APSS  SKN+ PRV A LD  P TDV+ + D+ TF RP+YAGNAIATVT+S+ +K+LTVR T FEKA  TGGS     AP    P A L+ F+SE  S S RP+L++ARVV+SGGRGLK+ E+F +L  LADKLKGAVGASRAAVD   +PNELQ+GQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQVADYGLV DLF+A+PELT+K+
Sbjct:    9 FSRASSRFASTLVVAEHNGE--ALTGGTLSAITAASKIGGDITVLVSGSNTAN-IAKEAAAVQGVKSVLHADAAQFDHAIAEELSSLVVTIQKGSNFSHIVAPSSNISKNFFPRVGAALDVAPFTDVLTVVDENTFQRPLYAGNAIATVTSSDSVKLLTVRPTGFEKAAVTGGSGVVSAAPTA--PAANLTRFVSEETSSSERPDLTAARVVVSGGRGLKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQIGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVEDLFKALPELTEKI 327          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|673051405|ref|XP_008879663.1| (hypothetical protein H310_13802 [Aphanomyces invadans] >gi|574464692|gb|ETV91737.1| hypothetical protein H310_13802 [Aphanomyces invadans])

HSP 1 Score: 375.555 bits (963), Expect = 1.164e-125
Identity = 201/324 (62.04%), Postives = 249/324 (76.85%), Query Frame = 0
Query:   86 MSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
             SR  +R ASTLVVAEH+    TL+  TL  ITAA ++   +TVLV+G     ++A++AA V GV  VL A+ A ++  IAE LS  VV   K  ++SHI+APSS  SKN++PRV A LD  P TDV+++ D+ TF RP+YAGNAIATVT+S+ +K+LTVR T FEKA +TGG+ A  V+ A A P A L+ F+SE  S S RP+L++ARVV+SGGRGLK+ E+F +L  LADKLKGAVGASRAAVD   +PNELQ+GQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQVADYGLV DLF+AVPELT+K+
Sbjct:   25 FSRASSRFASTLVVAEHNGE--TLTGGTLSAITAASKIGGDITVLVSGSN-TASIAKEAAAVQGVKAVLHADAAQFDHAIAEELSSLVVTIQKGSNFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLSVVDENTFQRPLYAGNAIATVTSSDSVKLLTVRPTGFEKAATTGGTGA--VSAAPAAPAANLTRFVSEETSSSERPDLTAARVVVSGGRGLKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQIGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVEDLFKAVPELTEKI 343          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|669157644|ref|XP_008614384.1| (electron transfer flavoprotein alpha subunit [Saprolegnia diclina VS20] >gi|530733740|gb|EQC31982.1| electron transfer flavoprotein alpha subunit [Saprolegnia diclina VS20])

HSP 1 Score: 371.703 bits (953), Expect = 2.895e-124
Identity = 201/318 (63.21%), Postives = 244/318 (76.73%), Query Frame = 0
Query:   92 RDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            R ASTLVVAEH+  K  L+  TL  ITAA ++   +TVLV+G     A+AQ+AA V GV  VL A+ A Y+  IAE ++  V A   A  +SHILAPSS  SKN+VPR+ A LD  P+TDV+A+ D+ TF RPMYAGNAIATVT+S+ +K++T+R T FEKA +TGGSA+   AP  A   A L+ F+SE  S S RP+L+SARVV+SGGRG+K+ E+F ML  LADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYGLV DLF+ VPELT+K+
Sbjct:   16 RFASTLVVAEHAGQK--LTGGTLSAITAASKIGGDITVLVSGSN-TAAIAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAPTAAP--ANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFAMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVSDYGLVDDLFKVVPELTEKI 328          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|1088926326|emb|SDZ80118.1| (electron transfer flavoprotein alpha subunit apoprotein [Microbulbifer marinus])

HSP 1 Score: 369.777 bits (948), Expect = 7.892e-124
Identity = 192/315 (60.95%), Postives = 244/315 (77.46%), Query Frame = 0
Query:   95 STLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            S LV+AEH  ++  L  +TL TI AA  +   + VLVAG  G  AV + AA++ GV+KVLVA++AAYE  +AEN+++ V    K  DYSHILAP++   KN +PRVAALLD QPI+D+IA++   TF RP+YAGN IATV +S+ +K++TVRTTAF+  P+ GGSAA E        +AG+S+F+ E ++ S RPEL+SARVVISGGRG++  ++F+ML  LADKL  AVGASRAAVD   +PN++QVGQTGK+VAPDLY+AVGISGAIQHL+GMKDSKVIVAINKD+EAPIF VADYGLVADLF+AVPEL  K+
Sbjct:    2 SILVIAEHDNAE--LKGATLNTIAAAKAMGGDIDVLVAGA-GCGAVGEAAAKIEGVNKVLVADNAAYEHQLAENVAKLVADLGK--DYSHILAPATTTGKNMLPRVAALLDVQPISDIIAVESADTFKRPIYAGNVIATVQSSDAIKVITVRTTAFDAVPAEGGSAAVESVDI--ADDAGVSSFVGEELAVSDRPELTSARVVISGGRGMQNGDNFEMLYKLADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLFEAVPELETKL 309          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|813149633|ref|XP_012200463.1| (hypothetical protein SPRG_05791 [Saprolegnia parasitica CBS 223.65] >gi|641534990|gb|KDO28920.1| hypothetical protein SPRG_05791 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 370.163 bits (949), Expect = 1.181e-123
Identity = 201/318 (63.21%), Postives = 245/318 (77.04%), Query Frame = 0
Query:   92 RDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            R ASTLVVAEH+  K  L+  TL  ITAA ++   +TVLV+G     AVAQ+AA V GV  VL A+ A Y+  IAE ++  V A   A  +SHILAPSS  SKN+VPR+ A LD  P+TDV+A+ D+ TF RPMYAGNAIATVT+S+ +K++T+R T FEKA +TGGSA+   AP  A   A L+ F+SE  S S RP+L+SARVV+SGGRG+K+ E+F+ML  LADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYG+V DLF+ VPELT+K+
Sbjct:   16 RFASTLVVAEHAGQK--LTGGTLSAITAASKIGGDITVLVSGSN-TAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAPTAAP--ANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|695430441|ref|XP_009530443.1| (hypothetical protein PHYSODRAFT_354931 [Phytophthora sojae] >gi|348673195|gb|EGZ13014.1| hypothetical protein PHYSODRAFT_354931 [Phytophthora sojae])

HSP 1 Score: 367.466 bits (942), Expect = 1.181e-122
Identity = 193/315 (61.27%), Postives = 244/315 (77.46%), Query Frame = 0
Query:   95 STLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            STLVVAEH++++  +S +TL T+TAA Q+   +T+LV G +   A A+ A +V GV  VL A    Y+  +AE +++ +VA  KA +YSH+LAPSS  SKNY+PR  A LD  PI+D++A+ D+ TF RP YAGNAIA V + + +K++TVR T FEKA + GGSA+  V+PA   P  G ++F+SE VS+S RP+L+SARVVISGGRGLK+ E+F+ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELT+K+
Sbjct:   21 STLVVAEHNQAQ--ISGATLATVTAASQIGGDITLLVLGSQAGPA-AEAATKVAGVKNVLHAADPKYDHLVAEEVAELLVAAQKAENYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGSAS--VSPAPEAPTVGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVGDLFDAVPELTEKI 330          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|568057706|gb|ETM54360.1| (hypothetical protein L914_02295 [Phytophthora parasitica])

HSP 1 Score: 367.081 bits (941), Expect = 1.846e-122
Identity = 195/315 (61.90%), Postives = 247/315 (78.41%), Query Frame = 0
Query:   95 STLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            STLVVAEH++S+  +S +TL T++AA Q+   +T+LV G +     A+ AA+V GV+ VL A    Y+  +AE +++ +VA  KAGDYSH+LAPSS  SKNY+PR  A LD  PI+D++A+ D+ TF RP YAGNAIA V + + +K++TVR T FEKA + GG+A+  V+PA   P AG ++F+SE VS+S RP+L+SARVVISGGRGLK+ E+F+ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELT+K+
Sbjct:   21 STLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQ-AGPAAEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDIVAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNAS--VSPAPEAPTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|570335646|gb|ETO83594.1| (hypothetical protein F444_02409 [Phytophthora parasitica P1976])

HSP 1 Score: 366.696 bits (940), Expect = 2.763e-122
Identity = 194/315 (61.59%), Postives = 247/315 (78.41%), Query Frame = 0
Query:   95 STLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            STLVVAEH++S+  +S +TL T++AA Q+   +T+LV G +     A+ AA+V GV+ VL A    Y+  +AE +++ +VA  KAGDYSH+LAPSS  SKNY+PR  A LD  PI+D++A+ D+ TF RP YAGNAIA + + + +K++TVR T FEKA + GG+A+  V+PA   P AG ++F+SE VS+S RP+L+SARVVISGGRGLK+ E+F+ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELT+K+
Sbjct:   21 STLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQ-AGPAAEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDIVAVADKDTFFRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAAAEGGNAS--VSPAPEAPTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330          
BLAST of EWM29227.1 vs. NCBI_GenBank
Match: gi|970642656|gb|KUF84248.1| (Electron transfer flavoprotein subunit alpha [Phytophthora nicotianae])

HSP 1 Score: 365.925 bits (938), Expect = 2.956e-122
Identity = 195/315 (61.90%), Postives = 247/315 (78.41%), Query Frame = 0
Query:   95 STLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
            STLVVAEH++S+  +S +TL T++AA Q+   +T+LV G +     A+ AA+V GV+ VL A    Y+  +AE +++ +VA  KAGDYSH+LAPSS  SKNY+PR  A LD  PI+D++A+ D+ TF RP YAGNAIA V + + +K++TVR T FEKA + GG+A+  V+PA   P AG ++F+SE VS+S RP+L+SARVVISGGRGLK+ E+F+ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELT+K+
Sbjct:    2 STLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQ-AGPAAEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNAS--VSPAPEAPTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 311          
The following BLAST results are available for this feature:
BLAST of EWM29227.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111748|gb|EWM29227.1|0.000e+0100.00electron transfer flavoprotein [Nannochloropsis ga... [more]
gi|698814094|ref|XP_009840076.1|1.801e-12761.42hypothetical protein H257_14051 [Aphanomyces astac... [more]
gi|673051405|ref|XP_008879663.1|1.164e-12562.04hypothetical protein H310_13802 [Aphanomyces invad... [more]
gi|669157644|ref|XP_008614384.1|2.895e-12463.21electron transfer flavoprotein alpha subunit [Sapr... [more]
gi|1088926326|emb|SDZ80118.1|7.892e-12460.95electron transfer flavoprotein alpha subunit apopr... [more]
gi|813149633|ref|XP_012200463.1|1.181e-12363.21hypothetical protein SPRG_05791 [Saprolegnia paras... [more]
gi|695430441|ref|XP_009530443.1|1.181e-12261.27hypothetical protein PHYSODRAFT_354931 [Phytophtho... [more]
gi|568057706|gb|ETM54360.1|1.846e-12261.90hypothetical protein L914_02295 [Phytophthora para... [more]
gi|570335646|gb|ETO83594.1|2.763e-12261.59hypothetical protein F444_02409 [Phytophthora para... [more]
gi|970642656|gb|KUF84248.1|2.956e-12261.90Electron transfer flavoprotein subunit alpha [Phyt... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1445rna1445Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications