EWM29287.1, cds1418 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|585111810|gb|EWM29287.1| (5 - cytosolic iii [Nannochloropsis gaditana]) HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0 Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0
Query: 1 MAAPPPPPEPPQEGLWGRLSARIVRTTQSLLESKGEEDQGERRQTQYPPPPPYGRDGLSSEGGRPPYPGAGAGPSSEQYTPPPARAGDPWRGPARSDGLYPSAPGGPQGRHPDARHLPVPPPPPPSPFSPPSGSEGAVVQEQGFGDTRAHLEGEEDLPDVFTVGDNMLLVRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAHTRATLDGLAGTLRRELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVLGTG 470
MAAPPPPPEPPQEGLWGRLSARIVRTTQSLLESKGEEDQGERRQTQYPPPPPYGRDGLSSEGGRPPYPGAGAGPSSEQYTPPPARAGDPWRGPARSDGLYPSAPGGPQGRHPDARHLPVPPPPPPSPFSPPSGSEGAVVQEQGFGDTRAHLEGEEDLPDVFTVGDNMLLVRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAHTRATLDGLAGTLRRELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVLGTG
Sbjct: 1 MAAPPPPPEPPQEGLWGRLSARIVRTTQSLLESKGEEDQGERRQTQYPPPPPYGRDGLSSEGGRPPYPGAGAGPSSEQYTPPPARAGDPWRGPARSDGLYPSAPGGPQGRHPDARHLPVPPPPPPSPFSPPSGSEGAVVQEQGFGDTRAHLEGEEDLPDVFTVGDNMLLVRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAHTRATLDGLAGTLRRELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVLGTG 470
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|299115547|emb|CBN75751.1| (Cytosolic 5\'-nucleotidase III-like protein A (cN-III-like protein A) [Ectocarpus siliculosus]) HSP 1 Score: 166.007 bits (419), Expect = 1.403e-42 Identity = 102/321 (31.78%), Postives = 169/321 (52.65%), Query Frame = 0
Query: 158 PDVFTVGDNMLLVRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQR-----TESAEGLVHEAVLMAHTRATLDGLAGTLRRELE---AATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGF--SGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVLG 468
P+V +V ++++V P L +K R F Q G+ L+V+A F+ L + A G+ T++ E H V++ + L +R ++ T +ER A E+ +KV+ +VA EG V++ ++ A+ +PLR ++ LA+R +PLTIFC GYG+V +L +P + GG P+LRLV+NFFR G + P++H + T F G+ + + + SNV LLG L D+ + +G + I++GFL+ ++ +LP + +AYDVVI+GDG M YAN ++ +V+G
Sbjct: 133 PEVISVDGSIVMVLKPNDLAKKKRKFKQDGANKLQVIATFDHCLTAFHAKDGKTPCLKTTDALEQNQH--VMLPEAAKKVRFLRSDFKRRMDEGGKTMTPDERVAALEDNLRKVYSVVAMEGGVHMNSIGPAIESQLDGIPLREGVDDMTAALAWRAIPLTIFCAGYGNVAMEVLRRGSPKITGPGGVFTPHLRLVANFFRPDDTMTIIGMYDTVPLIHEAKKSGATLLEFLRGVRQENA-------FSARSNVLLLGAELSDIGLGNGLPGVEERITVGFLKLDGHVLDKLPRYAQAYDVVILGDGDMSYANEILHEVVG 444
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|1061488064|gb|ODN05121.1| (7-methylguanosine phosphate-specific 5'-nucleotidase [Orchesella cincta]) HSP 1 Score: 117.472 bits (293), Expect = 5.980e-26 Identity = 84/293 (28.67%), Postives = 138/293 (47.10%), Query Frame = 0
Query: 180 IRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAHTRATLDGLAGTLRR----ELEAATTEEERHAKQEEFTQKVHE-IVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
+RS +G QSL+V+ F+ L Y G++ ES+ G++ + L+ T+ D + E+ + T EE+ E+ +K H+ ++ ++ L + D + V LR N + LK L +P I G G++V IL ++ L PN+++++NF + G FS PVVH N N + L+S NV L+G SLGD+ MASG V+ +GFL T + LP ++E+YDVV++ D M + N ++ V+
Sbjct: 46 LRSLVSSGPQSLQVITDFDATLSRYHV-NGKKCESSYGVIAHSPLV--TKKVKDEAIELFDKYYPIEINVSMTAEEKTPYMIEWYEKSHDSFLSSSPRLKLSQITEMAKD--AHVILRDNSHKLLKTLHKANIPALILSAGMGNLVEEILKVNSVNL--------PNVKVIANFMKFDETGTLKEFSEPVVHVYNKNEAVLHDDHTAYFEN---------LKSRPNVILMGDSLGDVNMASGVQEASAVLKIGFLNTHFE--EHLPAYMESYDVVLVDDQSMDFINSILDLVI 314
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|1169037814|ref|XP_020471242.1| (cytosolic 5'-nucleotidase 3A isoform X2 [Monopterus albus]) HSP 1 Score: 114.005 bits (284), Expect = 6.690e-25 Identity = 84/300 (28.00%), Postives = 141/300 (47.00%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMA-HTRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
+RDP + + I + G+ L+++ F+ + + A G+R + ++ L+ R L L E++ T EE++ E+ K H ++ E ++ LP V + S V LR EQ L VP+ IF G GDV+ I+ + G PN+++VSNF +GV GF G ++H N +H G +R +L+ SNV L+G SLGDL MA G + + +GFL + +L +L++YD+V++ D ++ N ++ +VL
Sbjct: 11 MRDPERVEQIICGLIKGGASKLQIITDFDMTISKF-AVNGKRYPTCHNIIDNCKLVTDECRQKLLQLKNKYYPIEIDPHLTMEEKYPFMVEWYFKSHTLLV-EQRLERDKLPEVVRE--SDVALREGFEQFFDRLQQHNVPVFIFSAGLGDVLEEIIRQA--------GVYHPNIKVVSNFMDFDDNGVLRGFKGDLIHVYN------KH--DGALRNTEYF---KQLKEYSNVILMGDSLGDLSMADGVSNKENTLKIGFLNDRVE--ERLDKYLDSYDIVLVKDETLEVPNAILQKVL 285
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|1169037812|ref|XP_020471241.1| (cytosolic 5'-nucleotidase 3A isoform X1 [Monopterus albus]) HSP 1 Score: 112.849 bits (281), Expect = 4.085e-24 Identity = 84/300 (28.00%), Postives = 141/300 (47.00%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMA-HTRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
+RDP + + I + G+ L+++ F+ + + A G+R + ++ L+ R L L E++ T EE++ E+ K H ++ E ++ LP V + S V LR EQ L VP+ IF G GDV+ I+ + G PN+++VSNF +GV GF G ++H N +H G +R +L+ SNV L+G SLGDL MA G + + +GFL + +L +L++YD+V++ D ++ N ++ +VL
Sbjct: 57 MRDPERVEQIICGLIKGGASKLQIITDFDMTISKF-AVNGKRYPTCHNIIDNCKLVTDECRQKLLQLKNKYYPIEIDPHLTMEEKYPFMVEWYFKSHTLLV-EQRLERDKLPEVVRE--SDVALREGFEQFFDRLQQHNVPVFIFSAGLGDVLEEIIRQA--------GVYHPNIKVVSNFMDFDDNGVLRGFKGDLIHVYN------KH--DGALRNTEYF---KQLKEYSNVILMGDSLGDLSMADGVSNKENTLKIGFLNDRVE--ERLDKYLDSYDIVLVKDETLEVPNAILQKVL 331
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|974048899|ref|XP_015241371.1| (PREDICTED: cytosolic 5'-nucleotidase 3A isoform X2 [Cyprinodon variegatus]) HSP 1 Score: 111.309 bits (277), Expect = 5.128e-24 Identity = 82/300 (27.33%), Postives = 142/300 (47.33%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAH-TRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
+RDP + + I + G+ L+++ F+ + + A G+R + ++ L+ R L L E++ T EE++ E+ K H ++ E ++ LP V + S V LR EQ L VP+ IF G GDV+ +++ + G PN+++VSNF +GV GF G ++H N +H G +R +LR SN+ LLG S+GDL MA G ++ +GFL + +L ++++YD+V++ D ++ N ++ +VL
Sbjct: 11 MRDPERVEQIICGLIKGGASKLQIITDFDMTISKF-AVNGKRCPTLHNIIDNCKLVTEECRQKLLQLKNKYYPIEIDPQLTIEEKYPFMVEWYFKSHSLLV-EQRLEKDKLPEVVRE--SDVALREGYEQFFDRLHQHNVPVFIFSAGLGDVLEEVISQA--------GVYHPNIKVVSNFMDFDDNGVLRGFKGELIHVYN------KH--DGALRSTDYF---KQLRDYSNIILLGDSMGDLTMADGVPNVENMLKIGFLNDKVE--ERLDKYMDSYDIVLVKDETLEVPNAILQKVL 285
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|1042312797|ref|XP_017350449.1| (PREDICTED: cytosolic 5'-nucleotidase 3A isoform X1 [Ictalurus punctatus]) HSP 1 Score: 110.923 bits (276), Expect = 8.252e-24 Identity = 82/300 (27.33%), Postives = 141/300 (47.00%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAH-TRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
++DP + + I + G+ L+++ F+ L + + G+R + ++ L+ R L L T E++ T EE++ E+ K H ++ E ++ LP V + S V LR E L VP+ IF G GDV+ I+ + G PN+++VSNF +G+ GF G ++H N +H G +R +L+ SNV LLG SLGDL MA G ++ +GFL + +L +L++YD+V++ D ++ N ++ ++L
Sbjct: 11 IKDPERVEQIICGLIKGGASKLQIITDFDMTLSKF-SINGKRCPTCHNIIDNCKLVTEECRQKLYKLKDTYYPIEIDPHLTMEEKYPFMVEWYFKSHTLLV-EQRLQKDKLPEVVRE--SDVCLREGYEHFFDRLQQHSVPVFIFSAGLGDVLEEIIRQA--------GVYHPNVKVVSNFMDFDENGILKGFKGELIHVYN------KH--DGALRNTDYF---KQLKDNSNVILLGDSLGDLNMADGVPNVGNLLKIGFLNDKVE--ERLEKYLDSYDIVLVKDETLEVPNSILQRIL 285
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|542234090|ref|XP_005455228.1| (PREDICTED: cytosolic 5'-nucleotidase 3A isoform X2 [Oreochromis niloticus] >gi|542234092|ref|XP_005455229.1| PREDICTED: cytosolic 5'-nucleotidase 3A isoform X2 [Oreochromis niloticus]) HSP 1 Score: 109.768 bits (273), Expect = 1.786e-23 Identity = 80/300 (26.67%), Postives = 140/300 (46.67%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAH-TRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
++D + +KI + G+ L+++ F+ L + + G+R + ++ L+ R L L E++ T EE++ E+ H ++ E ++ LP V + S V LR EQ L VP+ IF G GDV+ I+ + G PN+++VSNF +G+ GF G ++H N +H G +R +L+ SN+ LLG SLGDL MA G ++ +GFL + +L +L++YD+V++ D ++ N ++ ++L
Sbjct: 11 MKDHGKVEDKICGLIKGGASKLQIITDFDMTLSKF-SVNGKRCPTCHNIIDNCKLVTEECRGKLLALKNKYYPIEIDPQLTMEEKYPFMVEWYFNSHRLLV-EQRLERDKLPEVVRE--SDVALRDGFEQFFDRLHQHNVPVFIFSAGLGDVLEEIMRQA--------GVYHPNVKVVSNFMEFDENGILKGFKGELIHVYN------KH--DGALRNTEYF---KQLKEYSNIILLGDSLGDLSMADGVTNAENILKIGFLNDKVE--ERLDKYLDSYDIVLVKDETLEVPNAILQKIL 285
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|974048897|ref|XP_015240547.1| (PREDICTED: cytosolic 5'-nucleotidase 3A isoform X1 [Cyprinodon variegatus]) HSP 1 Score: 110.538 bits (275), Expect = 2.825e-23 Identity = 82/300 (27.33%), Postives = 142/300 (47.33%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAH-TRATLDGLAGTLR-RELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMNMTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
+RDP + + I + G+ L+++ F+ + + A G+R + ++ L+ R L L E++ T EE++ E+ K H ++ E ++ LP V + S V LR EQ L VP+ IF G GDV+ +++ + G PN+++VSNF +GV GF G ++H N +H G +R +LR SN+ LLG S+GDL MA G ++ +GFL + +L ++++YD+V++ D ++ N ++ +VL
Sbjct: 57 MRDPERVEQIICGLIKGGASKLQIITDFDMTISKF-AVNGKRCPTLHNIIDNCKLVTEECRQKLLQLKNKYYPIEIDPQLTIEEKYPFMVEWYFKSHSLLV-EQRLEKDKLPEVVRE--SDVALREGYEQFFDRLHQHNVPVFIFSAGLGDVLEEVISQA--------GVYHPNIKVVSNFMDFDDNGVLRGFKGELIHVYN------KH--DGALRSTDYF---KQLRDYSNIILLGDSMGDLTMADGVPNVENMLKIGFLNDKVE--ERLDKYMDSYDIVLVKDETLEVPNAILQKVL 331
BLAST of EWM29287.1 vs. NCBI_GenBank
Match: gi|677454882|gb|KFQ44296.1| (Cytosolic 5'-nucleotidase 3A [Nestor notabilis]) HSP 1 Score: 108.612 bits (270), Expect = 4.391e-23 Identity = 74/303 (24.42%), Postives = 141/303 (46.53%), Query Frame = 0
Query: 170 VRDPRGLREKIRSFAQAGSQSLEVLAAFEGGLKPYRAPGGQRTESAEGLVHEAVLMAH-TRATLDGLAGTLRR-ELEAATTEEERHAKQEEFTQKVHEIVAREGQVYLPALPRAVHDFASSVPLRTNLEQTLKMLAFRGVPLTIFCPGYGDVVAHILASSAPGLAAHGGFLPPNLRLVSNFFRAGPDGVAHGFSGPVVHALNMN---MTTARHFRSGMMRGASVGMGGGELRSPSNVFLLGGSLGDLKMASGGGMERQVISLGFLETGRDLVAQLPLFLEAYDVVIMGDGGMQYANHLIGQVL 467
++DP + E I + G+ L+++ F+ L + + G+R + ++ + L+ R L L T E++ A T EE++ E+ K H ++ +G + V + S V L+ E L+ +P+ IF G GD++ ++ + G PN+++VSNF +G+ GF G ++H N + + +F+ +L+ SN+ LLG S GDL MA G ++ +G+L D L ++++YD+V++ D ++ AN ++ ++L
Sbjct: 11 IKDPGRVEEIICGLIKGGAAKLQIITDFDMTLSRF-SYNGKRCPTCHNIIDNSKLITEECRKKLLQLKETYYAIEIDPALTTEEKYPYMVEWYNKSHALLIEQG-LQKDKFAEVVRE--SDVMLKEGYENFFDKLSEHNIPVFIFSAGIGDILEEVIHQA--------GVYHPNVKVVSNFMDFDENGILKGFKGELIHVYNKHDGALKNTEYFK--------------QLKDNSNIILLGDSQGDLSMADGVANVEHILKIGYLNDKVD--ELLEKYMDSYDIVLVKDESLEVANSILQKIL 285 The following BLAST results are available for this feature:
BLAST of EWM29287.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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