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Properties
| Property Name | Value |
|---|
| Product | septum site-determining protein |
| Orig transcript id | gnl|cribi|Naga_100029g16.9521.mrna |
| Orig protein id | gnl|cribi|Naga_100029g16.9521 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:568147..569881 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1409 ID=rna1409|Name=rna1409|organism=Nannochloropsis gaditana|type=mRNA|length=1755bp
ATGTGCTTATGTGTGTCTTGTCATGGTTGCCATCGGCAGGATGAGGTGGT
CCGGGTATCAGTAGCGAAACAGGAAGCCCACTCGCGCGTGGGGGCTTGGC
CTTGCGACCGTTTTCCTAAGATGGGAGACGACGCCTACCGCCATAATACG
CATCATCACCACGCAGGGCACAAAAAGGGGAGCTTTCTCAACAAGCTTTT
TGCGCGTCAAAGTAGTTTAAAGGCGGCAATTGGATATGGGCCCAGCAGGG
GCGATCATGAGTGCAGCGAAAAGGATGACGAGGGCAGGGCATCCTCACCT
TCGCGTCAGCAGGGAGAGCATCAGGGGTCCAGGTTCCATTTCCCGCATTC
TCCTTTAAGTTCTTCTACACCCATTTTCTCAAGCATACGAACTCGGGCTG
GGACGAAGGTGGGGACCGAAGGCCTCACCGGAGGAAGAGGGGGAACGAGG
GAGAAGTCGGGCGCGATTCGAGATTGTGGCACCGGAGAGGAAAGGCTCAC
GGGAAGATTTCTCCCTCCTCTGACTCCAGCAGCAAGTGCATCAGTCAAGA
CTGCATTGGATTTTTTGGGATCGACAGCCCTAGGTGTGGAGGGACTTTAT
CGGGTTTCTGGCAACAAGTTGGACGTGGATAGCCTCAAGGCCCTGATGGC
GGAAGGGCTGCTCGTCTCGGCGGAGACGCTCAGATCGCACTACCCGGACA
AGCACGTGGTGGCGGGGGCCATCAAAAAGGTCTTGCAGGAGCACGAACCC
CTTCTCTCCTACCGGCTGTACGCGGACTTTGTGGCGGCAAGCTTCAACCC
AACCGCAGGCCCGCTCGAAGGGAACGAGGGGGATAGGGCTTGCAAAGAGG
AGTCTGGCGGCAAGGAGGGTCGGTACAGGGCCCTGGTGCAAGATCTCAGT
CCCGCCCCCCGCGACCTGCTCGGGCACCTCATGCGGCACCTGGTCCGGGT
GGCGGAGCGGAAGGAAGCGAACCGGATGACGCCGGAGAACCTGGCGGTGA
CGGTGGGCCTGCACTTGTTGCGGAAATCGGAATCTGTGACGGAGGTCAGC
ATCCATCAATTGGAGAAAGAGAGGGCCGTTATAATGGATCTGATTGCGCT
TTGTCCCGTTCTGTTTCCAGCGGACGCGCAAGCGAGCAAGAAGCAGGCCC
CAGCCAAGCCCTTCCACCTCCCGCGCTCCGTCAAATCTGCTCCCCCCGGA
CGTGAGGCCTGCCACTTCTTCTCTTTGACGGACGAGATGGCGAGAAGGAC
CGCCCCTCTCTCAATGAGGACGGCGGAAGAAGGGATTGATGGTGAGCACT
GTGCGGGTGCATCGGTGACGCTCAAGCCGCCTCCTAAACCCCTGGGAAGG
CCCCCGAATCCCCTCATGACCGGCAGCAGCAGCAGACAAGAGCATTGTTT
GAAAATGGATCATGGAAGAAACAGAAGTCACGTCAACCAGGGCAATATGG
CTACTGGCCACGTGATGGACTGCGCGATGAACAGGGAGGAAATCAGGAAA
AAGGATCTTGCCATTGCACCCGAGGTTTGGAAGGTGTCGACAGGGTTACC
GTCATTCCCTGGGATTAGCCCGCAGCACCCTCCAGCGAAGCCCTCGCGGA
CAACACCACAATGTACTCCTTCCATTGAGCCATCCGTCATCTTTTGGACG
CGGGCGATATTGGCGAGACTTGAGGGGCTCGAGGAAACGTACGCCGCATG
GTCTCTTGTGAATAATTTAACCAACGCGAGATGCTCAAATTGCACTGCAT
GCTGA back to topprotein sequence of rna1409 >rna1409-protein ID=rna1409-protein|Name=rna1409|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MTIGLVRASRSIIWTGAGARACQALEHRAPRKPWGLQPAGVSMRSVASDS
RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGA
ERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAV
GKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDS
DKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELL
GLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEF
RFLSPRPTGILSMLFSRGTERARSAAYLILYVLSSFYVRDQTY back to topmRNA from alignment at CM002457.1:568147..569881- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1409 ID=rna1409|Name=rna1409|organism=Nannochloropsis gaditana|type=mRNA|length=1735bp|location=Sequence derived from alignment at CM002457.1:568147..569881- (Nannochloropsis gaditana)
ATGACAATTGGACTGGTTCGGGCATCTAGGTCAATAATTTGGACCGGCGC
TGGGGCCAGGGCATGCCAAGCTTTGGAGCACAGGGCGCCTCGCAAGCCTT
GGGGGTTGCAGCCTGCGGGGGTCAGCATGCGGAGCGTCGCCAGTGATTCT
CGGGTGCTATGCATCACGTCCGGTAAAGGCGGCGTGGGGAAAACGACGAC
AGCAGCCAGCATTGGGATGGGTCTGGCTTTGAAGGGAAAGAAAACCTGCG
TTATCGATTTCGATATAGGCCTCCGCAACTTGGACATTCACTTGGTACGG
GGCCCAACGGGAGGGGACAGGTGTAAGATTGTATCGTTGCCATATCAGTA
ACGGCGGGCAGACTCGTCTGTGCCCTTTGTCTCGAATGCTCTGGTCCTGC
TGATTCCTGTTTGCGTGCCATCCTAGTCAGAGTGTTCTCAGGACATGGGT
CAGGCCCAAGGTCGCCTGACCTCTAAACCTCACCCTCTCTCTTCTCGCCG
CACTCCCTTCGCTTCCTCCAGGGCGCGGAACGACGAGTAATATTCGACTT
CGTCCACGTGCTGCAGGGGGACTGCACGCTCAAGCAGGCGATGATCAAGG
ACAAGCGGAACCCGAACCTTTTCCTGCTCGCGGCCTCCCAGACCAAGGAT
AAGAACGCCTTGACCGTGGACGCAGTCGGCAAGATGCTGGCAGAGATGCG
CCGTGAGTTCGACTTTATCATCTGCGACTCTCCCGCCGGGATCGAGAGCG
GGGCCAGGCACGCCATGTACTTCGCGGACGACGCCATCATCGTGACGAAT
CCGGAGCTCAGCTCTTGTCGGTAGGTGGGCAGGAAGGCGCGCGACAAGCT
CCGTCGGGATGTCCATGTGGAAAATGCTGCCTGCGCGGGGGGACGGGGGT
ATGGTGGGAAGTCGGGGTGACAGTTGGGTCGCACACAGGCTGACGATATC
TCTTGTGGTCCTTCCCCCGCCCACAGCGACAGCGACAAGATGATAGGCTT
CATTTCCAGCAGATCGAAACGGGCGGAGCTCGGGCAAGAGCCTGTGCGCC
AGTCTCTCCTTGTCACGCGCTACGACCCCGAGCGCGCCCAGAAGGAGGAG
TGCCTGCGTCTGGAGGACATCAAGGTGAGCGGCCCGGGGGCAGCCCTTGG
AGATTCGCCGTCGACTGCCGGTTCCTCACAATCCCTTCACTCGGCACAGG
AACTACTGGGGCTGGAGCTGCTGGGCGTGATCCCGGAGAGCAAGTGCATC
CTCACGGCCACCAACCTGGGCCAGCCGGTCATCTGCATGCCCGATCAGGA
CGCCGGTCAAGGTCTGTGCCCGGCGAGGGAGTCGCGGTGGGGGGCTTTGT
GCCTGTTACTCCCTGCGGTTGATTACGATTTCAGTGGCGGTTTATCGGAC
AAGACGCTCGCTCACTCAATGCTTGCCCCCGCAATCTTTTCACAGCCTAC
ATGGACACCGTGGAGCGCTTTCTCGGCGAGGAGAAAGAATTCCGCTTCCT
ATCCCCCAGGCCGACGGGCATCCTCTCGATGCTTTTCTCGCGCGGTACCT
AGAAGAAAGGGATTGGGTGGGTCGCACGGGTGCTAAGGCAAAGTTGGGTG
GGGAGTGGGGAAGGACTGCCGGGGATGTGCATGGCGCGCAACTCGGGCAC
GCTAGGCACCGAGCGGGCTCGTAGTGCTGCCTACCTGATACTGTACGTAT
TAAGTTCGTTTTATGTCCGCGATCAGACCTACTGA back to topCoding sequence (CDS) from alignment at CM002457.1:568147..569881- >rna1409 ID=rna1409|Name=rna1409|organism=Nannochloropsis gaditana|type=CDS|length=6192bp|location=Sequence derived from alignment at CM002457.1:568147..569881- (Nannochloropsis gaditana)
GCACCGAGCGGGCTCGTAGTGCTGCCTACCTGATACTGTACGTATTAAGT
TCGTTTTATGTCCGCGATCAGACCTACTGACCTACATGGACACCGTGGAG
CGCTTTCTCGGCGAGGAGAAAGAATTCCGCTTCCTATCCCCCAGGCCGAC
GGGCATCCTCTCGATGCTTTTCTCGCGCGGAACTACTGGGGCTGGAGCTG
CTGGGCGTGATCCCGGAGAGCAAGTGCATCCTCACGGCCACCAACCTGGG
CCAGCCGGTCATCTGCATGCCCGATCAGGACGCCGGTCAAGCGACAGCGA
CAAGATGATAGGCTTCATTTCCAGCAGATCGAAACGGGCGGAGCTCGGGC
AAGAGCCTGTGCGCCAGTCTCTCCTTGTCACGCGCTACGACCCCGAGCGC
GCCCAGAAGGAGGAGTGCCTGCGTCTGGAGGACATCAAGGGCGCGGAACG
ACGAGTAATATTCGACTTCGTCCACGTGCTGCAGGGGGACTGCACGCTCA
AGCAGGCGATGATCAAGGACAAGCGGAACCCGAACCTTTTCCTGCTCGCG
GCCTCCCAGACCAAGGATAAGAACGCCTTGACCGTGGACGCAGTCGGCAA
GATGCTGGCAGAGATGCGCCGTGAGTTCGACTTTATCATCTGCGACTCTC
CCGCCGGGATCGAGAGCGGGGCCAGGCACGCCATGTACTTCGCGGACGAC
GCCATCATCGTGACGAATCCGGAGCTCAGCTCTTGTCGATGACAATTGGA
CTGGTTCGGGCATCTAGGTCAATAATTTGGACCGGCGCTGGGGCCAGGGC
ATGCCAAGCTTTGGAGCACAGGGCGCCTCGCAAGCCTTGGGGGTTGCAGC
CTGCGGGGGTCAGCATGCGGAGCGTCGCCAGTGATTCTCGGGTGCTATGC
ATCACGTCCGGTAAAGGCGGCGTGGGGAAAACGACGACAGCAGCCAGCAT
TGGGATGGGTCTGGCTTTGAAGGGAAAGAAAACCTGCGTTATCGATTTCG
ATATAGGCCTCCGCAACTTGGACATTCACTTGGCACCGAGCGGGCTCGTA
GTGCTGCCTACCTGATACTGTACGTATTAAGTTCGTTTTATGTCCGCGAT
CAGACCTACTGACCTACATGGACACCGTGGAGCGCTTTCTCGGCGAGGAG
AAAGAATTCCGCTTCCTATCCCCCAGGCCGACGGGCATCCTCTCGATGCT
TTTCTCGCGCGGAACTACTGGGGCTGGAGCTGCTGGGCGTGATCCCGGAG
AGCAAGTGCATCCTCACGGCCACCAACCTGGGCCAGCCGGTCATCTGCAT
GCCCGATCAGGACGCCGGTCAAGCGACAGCGACAAGATGATAGGCTTCAT
TTCCAGCAGATCGAAACGGGCGGAGCTCGGGCAAGAGCCTGTGCGCCAGT
CTCTCCTTGTCACGCGCTACGACCCCGAGCGCGCCCAGAAGGAGGAGTGC
CTGCGTCTGGAGGACATCAAGGGCGCGGAACGACGAGTAATATTCGACTT
CGTCCACGTGCTGCAGGGGGACTGCACGCTCAAGCAGGCGATGATCAAGG
ACAAGCGGAACCCGAACCTTTTCCTGCTCGCGGCCTCCCAGACCAAGGAT
AAGAACGCCTTGACCGTGGACGCAGTCGGCAAGATGCTGGCAGAGATGCG
CCGTGAGTTCGACTTTATCATCTGCGACTCTCCCGCCGGGATCGAGAGCG
GGGCCAGGCACGCCATGTACTTCGCGGACGACGCCATCATCGTGACGAAT
CCGGAGCTCAGCTCTTGTCGATGACAATTGGACTGGTTCGGGCATCTAGG
TCAATAATTTGGACCGGCGCTGGGGCCAGGGCATGCCAAGCTTTGGAGCA
CAGGGCGCCTCGCAAGCCTTGGGGGTTGCAGCCTGCGGGGGTCAGCATGC
GGAGCGTCGCCAGTGATTCTCGGGTGCTATGCATCACGTCCGGTAAAGGC
GGCGTGGGGAAAACGACGACAGCAGCCAGCATTGGGATGGGTCTGGCTTT
GAAGGGAAAGAAAACCTGCGTTATCGATTTCGATATAGGCCTCCGCAACT
TGGACATTCACTTGGCACCGAGCGGGCTCGTAGTGCTGCCTACCTGATAC
TGTACGTATTAAGTTCGTTTTATGTCCGCGATCAGACCTACTGACCTACA
TGGACACCGTGGAGCGCTTTCTCGGCGAGGAGAAAGAATTCCGCTTCCTA
TCCCCCAGGCCGACGGGCATCCTCTCGATGCTTTTCTCGCGCGGAACTAC
TGGGGCTGGAGCTGCTGGGCGTGATCCCGGAGAGCAAGTGCATCCTCACG
GCCACCAACCTGGGCCAGCCGGTCATCTGCATGCCCGATCAGGACGCCGG
TCAAGCGACAGCGACAAGATGATAGGCTTCATTTCCAGCAGATCGAAACG
GGCGGAGCTCGGGCAAGAGCCTGTGCGCCAGTCTCTCCTTGTCACGCGCT
ACGACCCCGAGCGCGCCCAGAAGGAGGAGTGCCTGCGTCTGGAGGACATC
AAGGGCGCGGAACGACGAGTAATATTCGACTTCGTCCACGTGCTGCAGGG
GGACTGCACGCTCAAGCAGGCGATGATCAAGGACAAGCGGAACCCGAACC
TTTTCCTGCTCGCGGCCTCCCAGACCAAGGATAAGAACGCCTTGACCGTG
GACGCAGTCGGCAAGATGCTGGCAGAGATGCGCCGTGAGTTCGACTTTAT
CATCTGCGACTCTCCCGCCGGGATCGAGAGCGGGGCCAGGCACGCCATGT
ACTTCGCGGACGACGCCATCATCGTGACGAATCCGGAGCTCAGCTCTTGT
CGATGACAATTGGACTGGTTCGGGCATCTAGGTCAATAATTTGGACCGGC
GCTGGGGCCAGGGCATGCCAAGCTTTGGAGCACAGGGCGCCTCGCAAGCC
TTGGGGGTTGCAGCCTGCGGGGGTCAGCATGCGGAGCGTCGCCAGTGATT
CTCGGGTGCTATGCATCACGTCCGGTAAAGGCGGCGTGGGGAAAACGACG
ACAGCAGCCAGCATTGGGATGGGTCTGGCTTTGAAGGGAAAGAAAACCTG
CGTTATCGATTTCGATATAGGCCTCCGCAACTTGGACATTCACTTGGCAC
CGAGCGGGCTCGTAGTGCTGCCTACCTGATACTGTACGTATTAAGTTCGT
TTTATGTCCGCGATCAGACCTACTGACCTACATGGACACCGTGGAGCGCT
TTCTCGGCGAGGAGAAAGAATTCCGCTTCCTATCCCCCAGGCCGACGGGC
ATCCTCTCGATGCTTTTCTCGCGCGGAACTACTGGGGCTGGAGCTGCTGG
GCGTGATCCCGGAGAGCAAGTGCATCCTCACGGCCACCAACCTGGGCCAG
CCGGTCATCTGCATGCCCGATCAGGACGCCGGTCAAGCGACAGCGACAAG
ATGATAGGCTTCATTTCCAGCAGATCGAAACGGGCGGAGCTCGGGCAAGA
GCCTGTGCGCCAGTCTCTCCTTGTCACGCGCTACGACCCCGAGCGCGCCC
AGAAGGAGGAGTGCCTGCGTCTGGAGGACATCAAGGGCGCGGAACGACGA
GTAATATTCGACTTCGTCCACGTGCTGCAGGGGGACTGCACGCTCAAGCA
GGCGATGATCAAGGACAAGCGGAACCCGAACCTTTTCCTGCTCGCGGCCT
CCCAGACCAAGGATAAGAACGCCTTGACCGTGGACGCAGTCGGCAAGATG
CTGGCAGAGATGCGCCGTGAGTTCGACTTTATCATCTGCGACTCTCCCGC
CGGGATCGAGAGCGGGGCCAGGCACGCCATGTACTTCGCGGACGACGCCA
TCATCGTGACGAATCCGGAGCTCAGCTCTTGTCGATGACAATTGGACTGG
TTCGGGCATCTAGGTCAATAATTTGGACCGGCGCTGGGGCCAGGGCATGC
CAAGCTTTGGAGCACAGGGCGCCTCGCAAGCCTTGGGGGTTGCAGCCTGC
GGGGGTCAGCATGCGGAGCGTCGCCAGTGATTCTCGGGTGCTATGCATCA
CGTCCGGTAAAGGCGGCGTGGGGAAAACGACGACAGCAGCCAGCATTGGG
ATGGGTCTGGCTTTGAAGGGAAAGAAAACCTGCGTTATCGATTTCGATAT
AGGCCTCCGCAACTTGGACATTCACTTGGCACCGAGCGGGCTCGTAGTGC
TGCCTACCTGATACTGTACGTATTAAGTTCGTTTTATGTCCGCGATCAGA
CCTACTGACCTACATGGACACCGTGGAGCGCTTTCTCGGCGAGGAGAAAG
AATTCCGCTTCCTATCCCCCAGGCCGACGGGCATCCTCTCGATGCTTTTC
TCGCGCGGAACTACTGGGGCTGGAGCTGCTGGGCGTGATCCCGGAGAGCA
AGTGCATCCTCACGGCCACCAACCTGGGCCAGCCGGTCATCTGCATGCCC
GATCAGGACGCCGGTCAAGCGACAGCGACAAGATGATAGGCTTCATTTCC
AGCAGATCGAAACGGGCGGAGCTCGGGCAAGAGCCTGTGCGCCAGTCTCT
CCTTGTCACGCGCTACGACCCCGAGCGCGCCCAGAAGGAGGAGTGCCTGC
GTCTGGAGGACATCAAGGGCGCGGAACGACGAGTAATATTCGACTTCGTC
CACGTGCTGCAGGGGGACTGCACGCTCAAGCAGGCGATGATCAAGGACAA
GCGGAACCCGAACCTTTTCCTGCTCGCGGCCTCCCAGACCAAGGATAAGA
ACGCCTTGACCGTGGACGCAGTCGGCAAGATGCTGGCAGAGATGCGCCGT
GAGTTCGACTTTATCATCTGCGACTCTCCCGCCGGGATCGAGAGCGGGGC
CAGGCACGCCATGTACTTCGCGGACGACGCCATCATCGTGACGAATCCGG
AGCTCAGCTCTTGTCGATGACAATTGGACTGGTTCGGGCATCTAGGTCAA
TAATTTGGACCGGCGCTGGGGCCAGGGCATGCCAAGCTTTGGAGCACAGG
GCGCCTCGCAAGCCTTGGGGGTTGCAGCCTGCGGGGGTCAGCATGCGGAG
CGTCGCCAGTGATTCTCGGGTGCTATGCATCACGTCCGGTAAAGGCGGCG
TGGGGAAAACGACGACAGCAGCCAGCATTGGGATGGGTCTGGCTTTGAAG
GGAAAGAAAACCTGCGTTATCGATTTCGATATAGGCCTCCGCAACTTGGA
CATTCACTTGGCACCGAGCGGGCTCGTAGTGCTGCCTACCTGATACTGTA
CGTATTAAGTTCGTTTTATGTCCGCGATCAGACCTACTGACCTACATGGA
CACCGTGGAGCGCTTTCTCGGCGAGGAGAAAGAATTCCGCTTCCTATCCC
CCAGGCCGACGGGCATCCTCTCGATGCTTTTCTCGCGCGGAACTACTGGG
GCTGGAGCTGCTGGGCGTGATCCCGGAGAGCAAGTGCATCCTCACGGCCA
CCAACCTGGGCCAGCCGGTCATCTGCATGCCCGATCAGGACGCCGGTCAA
GCGACAGCGACAAGATGATAGGCTTCATTTCCAGCAGATCGAAACGGGCG
GAGCTCGGGCAAGAGCCTGTGCGCCAGTCTCTCCTTGTCACGCGCTACGA
CCCCGAGCGCGCCCAGAAGGAGGAGTGCCTGCGTCTGGAGGACATCAAGG
GCGCGGAACGACGAGTAATATTCGACTTCGTCCACGTGCTGCAGGGGGAC
TGCACGCTCAAGCAGGCGATGATCAAGGACAAGCGGAACCCGAACCTTTT
CCTGCTCGCGGCCTCCCAGACCAAGGATAAGAACGCCTTGACCGTGGACG
CAGTCGGCAAGATGCTGGCAGAGATGCGCCGTGAGTTCGACTTTATCATC
TGCGACTCTCCCGCCGGGATCGAGAGCGGGGCCAGGCACGCCATGTACTT
CGCGGACGACGCCATCATCGTGACGAATCCGGAGCTCAGCTCTTGTCGAT
GACAATTGGACTGGTTCGGGCATCTAGGTCAATAATTTGGACCGGCGCTG
GGGCCAGGGCATGCCAAGCTTTGGAGCACAGGGCGCCTCGCAAGCCTTGG
GGGTTGCAGCCTGCGGGGGTCAGCATGCGGAGCGTCGCCAGTGATTCTCG
GGTGCTATGCATCACGTCCGGTAAAGGCGGCGTGGGGAAAACGACGACAG
CAGCCAGCATTGGGATGGGTCTGGCTTTGAAGGGAAAGAAAACCTGCGTT
ATCGATTTCGATATAGGCCTCCGCAACTTGGACATTCACTTG back to top
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