EWM29264.1, cds1407 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|585111787|gb|EWM29264.1| (septum site-determining protein [Nannochloropsis gaditana]) HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0 Query: 1 MTIGLVRASRSIIWTGAGARACQALEHRAPRKPWGLQPAGVSMRSVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFSRGTERARSAAYLILYVLSSFYVRDQTY 343 MTIGLVRASRSIIWTGAGARACQALEHRAPRKPWGLQPAGVSMRSVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFSRGTERARSAAYLILYVLSSFYVRDQTY Sbjct: 1 MTIGLVRASRSIIWTGAGARACQALEHRAPRKPWGLQPAGVSMRSVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFSRGTERARSAAYLILYVLSSFYVRDQTY 343
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|1173931284|gb|OQR83748.1| (septum site-determining protein minD [Achlya hypogyna]) HSP 1 Score: 367.081 bits (941), Expect = 9.252e-124 Identity = 174/268 (64.93%), Postives = 219/268 (81.72%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPT-GILSMLFSR 317 +V+ +TSGKGGVGKTT +ASIG GLA KG +TC+IDFDIGLRNLDIHLG ERRVIFDF+HV+ G+C L QA+IKDKR L LLAASQT+DK+ALT D VG++L E++++FDFIICDSPAGIESGARHAM+FAD+AIIVTNPE+SSCRDSDKMIGFI+S+S RA+ G+ V Q LL+ RYD +R EECL +EDI+E+L L ++GVIPES +L ++N+GQPVI A A+ DTV RFLGEE++F+FL+P + G+ LF++ Sbjct: 40 KVVVVTSGKGGVGKTTCSASIGYGLAQKGFRTCLIDFDIGLRNLDIHLGCERRVIFDFIHVIDGNCRLSQALIKDKRLDKLSLLAASQTRDKDALTEDGVGRVLEELKQDFDFIICDSPAGIESGARHAMFFADEAIIVTNPEISSCRDSDKMIGFIASKSLRAQEGRAKVNQYLLINRYDAKRVSNEECLSVEDIQEMLALPVVGVIPESAQVLNSSNMGQPVIASKTDKAAVAFEDTVARFLGEERDFKFLTPEKSLGLFGRLFNQ 307
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|298709759|emb|CBJ31561.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 367.851 bits (943), Expect = 1.275e-123 Identity = 178/264 (67.42%), Postives = 220/264 (83.33%), Query Frame = 0 Query: 52 VLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLF 315 V+ +TSGKGGVGKTTTAAS+ GLA G +TCVIDFDIGLRN+D+HLG ERRVIFDFV+V+Q CTL QA+I+D+RNP L LLAASQTKDK ALT + V +++ E+++ FD+++CDSPAGIESGARHAMY AD+A+IVTNPE+SSCRDSDKM+GFI+S+S+RAE GQ PVRQ+LLVTRYDP RA+ E L L DI+ELLGLE+LG+IPESK +LTATNLGQPVI DA AY D V+RFLG+ + +F+ P+P G+L +F Sbjct: 72 VVVVTSGKGGVGKTTTAASLSYGLAQAGHRTCVIDFDIGLRNMDLHLGCERRVIFDFVNVIQEQCTLNQALIQDRRNPGLSLLAASQTKDKEALTQEGVTRVIRELQKSFDYVVCDSPAGIESGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASKSRRAETGQAPVRQTLLVTRYDPARAESNEMLTLADIQELLGLEVLGLIPESKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFVQPKPAGLLKRMF 335
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|669156404|ref|XP_008613764.1| (septum site-determining protein MinD [Saprolegnia diclina VS20] >gi|530734836|gb|EQC33078.1| septum site-determining protein MinD [Saprolegnia diclina VS20]) HSP 1 Score: 365.925 bits (938), Expect = 2.319e-123 Identity = 174/268 (64.93%), Postives = 216/268 (80.60%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSP-RPTGILSMLFSR 317 +V+ +TSGKGGVGKTT +ASIG GLA KG +TC+IDFDIGLRNLDIHLG ERRVIFDF+HV+ G+C L QA+IKDKR L LLAASQT+DK+ALT D V K+L E++ EFD+IICDSPAGIESGARHAM+FAD+AIIVTNPE+SSCRDSDKMIGFI+S+S RA+ G+ V Q LL+ RYD +R EECL +EDI+E+L L ++GVIPES +L ++N+GQPVI A A+ DTV RFLGEE+E +FL+P + G+ LF++ Sbjct: 41 KVVVVTSGKGGVGKTTCSASIGYGLAQKGYRTCLIDFDIGLRNLDIHLGCERRVIFDFIHVIDGNCRLSQALIKDKRLEKLSLLAASQTRDKDALTEDGVAKVLEELKHEFDYIICDSPAGIESGARHAMFFADEAIIVTNPEISSCRDSDKMIGFIASKSLRAQEGRAKVNQYLLINRYDAKRVSNEECLSVEDIQEMLALPVVGVIPESAQVLNSSNMGQPVIASKTDKAAVAFEDTVARFLGEERELKFLTPEKSMGLFGRLFNQ 308
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|831766932|ref|XP_012751945.1| (hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1] >gi|735852577|dbj|GAM24856.1| hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1]) HSP 1 Score: 365.54 bits (937), Expect = 2.532e-123 Identity = 170/271 (62.73%), Postives = 221/271 (81.55%), Query Frame = 0 Query: 45 SVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPD-QDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSML 314 +V D +++ +TSGKGG GKTT+++S GLA KG KTCVIDFDIGLRNLDIH G ERRV+FDF++VL GDCTL+QA+IKD++NPNL+LLAASQTKDK AL ++AV K+L E+R FD+I+CDSPAGIESGA HAMY++D AII TNPELSS RDSDKM+G ++S+SKRA G++P++ +LL+TRY PERA+ L ++DI+E LG++L+GV+PES+ ILT TNLG+PVI + D +AY D VERFLG+ K FRF+ P+PTG+ S + Sbjct: 28 TVPHDQKIIVVTSGKGGTGKTTSSSSFSYGLAEKGFKTCVIDFDIGLRNLDIHFGMERRVVFDFINVLNGDCTLRQALIKDRKNPNLYLLAASQTKDKTALKMEAVEKVLDELRESFDYIVCDSPAGIESGAHHAMYWSDQAIICTNPELSSVRDSDKMLGILASKSKRALEGKDPIKLNLLITRYSPERAESGGMLSVKDIQENLGIKLIGVVPESQDILTCTNLGRPVITLDKASDPAEAYRDVVERFLGDPKPFRFIEPKPTGLFSKM 298
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|568033590|gb|ETM31289.1| (septum site-determining protein MinD [Phytophthora parasitica] >gi|570311739|gb|ETO59687.1| septum site-determining protein MinD [Phytophthora parasitica P1976]) HSP 1 Score: 364.77 bits (935), Expect = 4.147e-123 Identity = 174/267 (65.17%), Postives = 216/267 (80.90%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSP-RPTGILSMLFS 316 RV+ ITSGKGGVGKTT AS+G GLA +G +TC+IDFDIGLRNLD+HLG ERRVIFDF+HV++ +C L QA+IKDKR L LLAASQT+DK ALT + V ++L E+R +FDFI+CDSPAGIESGARHAMYFADDAI+VTNPE+SSCRDSDKMIGFI+S+S RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RFLGEE+E +FL P RP G+ +FS Sbjct: 32 RVMVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|675212569|ref|XP_008915169.1| (septum site-determining protein MinD [Phytophthora parasitica INRA-310] >gi|567945548|gb|ETK71359.1| septum site-determining protein MinD [Phytophthora parasitica] >gi|567974200|gb|ETL24801.1| septum site-determining protein MinD [Phytophthora parasitica] >gi|568084622|gb|ETM99548.1| septum site-determining protein MinD [Phytophthora parasitica INRA-310] >gi|570935516|gb|ETP00773.1| septum site-determining protein MinD [Phytophthora parasitica CJ01A1] >gi|570965805|gb|ETP28924.1| septum site-determining protein MinD [Phytophthora parasitica P10297]) HSP 1 Score: 364.77 bits (935), Expect = 4.832e-123 Identity = 174/267 (65.17%), Postives = 216/267 (80.90%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSP-RPTGILSMLFS 316 RV+ ITSGKGGVGKTT AS+G GLA +G +TC+IDFDIGLRNLD+HLG ERRVIFDF+HV++ +C L QA+IKDKR L LLAASQT+DK ALT + V ++L E+R +FDFI+CDSPAGIESGARHAMYFADDAI+VTNPE+SSCRDSDKMIGFI+S+S RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RFLGEE+E +FL P RP G+ +FS Sbjct: 32 RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|566008063|gb|ETI30974.1| (septum site-determining protein MinD [Phytophthora parasitica P1569]) HSP 1 Score: 364.77 bits (935), Expect = 5.331e-123 Identity = 174/267 (65.17%), Postives = 216/267 (80.90%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSP-RPTGILSMLFS 316 RV+ ITSGKGGVGKTT AS+G GLA +G +TC+IDFDIGLRNLD+HLG ERRVIFDF+HV++ +C L QA+IKDKR L LLAASQT+DK ALT + V ++L E+R +FDFI+CDSPAGIESGARHAMYFADDAI+VTNPE+SSCRDSDKMIGFI+S+S RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RFLGEE+E +FL P RP G+ +FS Sbjct: 32 RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|568003683|gb|ETL78028.1| (septum site-determining protein MinD [Phytophthora parasitica]) HSP 1 Score: 364.385 bits (934), Expect = 6.705e-123 Identity = 174/267 (65.17%), Postives = 216/267 (80.90%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSP-RPTGILSMLFS 316 RV+ ITSGKGGVGKTT AS+G GLA +G +TC+IDFDIGLRNLD+HLG ERRVIFDF+HV++ +C L QA+IKDKR L LLAASQT+DK ALT + V ++L E+R +FDFI+CDSPAGIESGARHAMYFADDAI+VTNPE+SSCRDSDKMIGFI+S+S RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RFLGEE+E +FL P RP G+ +FS Sbjct: 32 RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
BLAST of EWM29264.1 vs. NCBI_GenBank
Match: gi|301106673|ref|XP_002902419.1| (septum site-determining protein minD [Phytophthora infestans T30-4] >gi|262098293|gb|EEY56345.1| septum site-determining protein minD [Phytophthora infestans T30-4]) HSP 1 Score: 361.303 bits (926), Expect = 9.581e-122 Identity = 172/267 (64.42%), Postives = 215/267 (80.52%), Query Frame = 0 Query: 51 RVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPR-PTGILSMLFS 316 RV+ +TSGKGGVGKTT AS+G GLA +G +TC+IDFDIGLRNLD+HLG ERRVIFDF+HV++ +C L QA+IKDKR L LLAASQT+DK ALT D V ++L E++ +FDFI+CDSPAGIESGARHAMYFADDAI+VTNPE+SSCRDSDKMIGFI+S+S RA+ G+EPV Q LLV RYD R + ++CL ++DI+E+LGL + GVIPES +LT++N+GQPVI + A A+ D V RFLGEE+E +FL P P G+ +FS Sbjct: 29 RVVVVTSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEDGVEEVLDELKSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPEPPKGLFGRIFS 295 The following BLAST results are available for this feature:
BLAST of EWM29264.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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