EWM29320.1, cds1353 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|585111846|gb|EWM29320.1| (TRM112-like protein [Nannochloropsis gaditana]) HSP 1 Score: 354.755 bits (909), Expect = 6.433e-124 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MKNPISQGKVVLMLLVGCLEIFSLIPPCSRPPRIPLNSTKKYHQHAPTTVVMRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEVA 174
MKNPISQGKVVLMLLVGCLEIFSLIPPCSRPPRIPLNSTKKYHQHAPTTVVMRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEVA
Sbjct: 1 MKNPISQGKVVLMLLVGCLEIFSLIPPCSRPPRIPLNSTKKYHQHAPTTVVMRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEVA 174
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|1150692982|ref|XP_020257429.1| (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Asparagus officinalis] >gi|1141994336|gb|ONK75555.1| uncharacterized protein A4U43_C03F18120 [Asparagus officinalis]) HSP 1 Score: 168.318 bits (425), Expect = 7.539e-51 Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV +G+PLRIEA + KE +FN++F++N+ PK+DWPAL A+K LG +LPEE + + D FL+ H LL+VHV EG+LVCPETGRRFP+N GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLASNIKGVTSGYPLRIEAHQSAAKEADFNADFLRNVFPKIDWPALVSAAKTLGYGDLPEEAEPSMLESDEFLRRFHHALLEVHVEEGALVCPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|951020785|ref|XP_014512492.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Vigna radiata var. radiata]) HSP 1 Score: 165.236 bits (417), Expect = 1.098e-49 Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV+NGFPLRIEAEKV K E NSEF++ + KVDW A AS+ +G ELPEE+D + D FL H LL++H+ EG+LVCPETGRRFP+N GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSSNIKGVVNGFPLRIEAEKVVEKTVEMNSEFLKKMFEKVDWKAFVDASRAMGYTELPEEVDSSILDSDEFLNRFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|743773080|ref|XP_010916870.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Elaeis guineensis]) HSP 1 Score: 164.851 bits (416), Expect = 1.898e-49 Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML N+KGV NGFPLR+EAEK KE E N++F++ + PK++W AL GA++ +G D+LP+E D + D FL+ H LL++HV EG+LVCPETGRRFPIN GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSCNIKGVSNGFPLRLEAEKWVEKEVELNADFLRGIFPKIEWKALAGAARAIGYDQLPDEADASMLDSDDFLRRFHHALLELHVEEGALVCPETGRRFPINKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|1044555045|ref|XP_017413643.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Vigna angularis] >gi|920692585|gb|KOM35810.1| hypothetical protein LR48_Vigan02g196000 [Vigna angularis] >gi|965607895|dbj|BAT94386.1| hypothetical protein VIGAN_08098500 [Vigna angularis var. angularis]) HSP 1 Score: 164.466 bits (415), Expect = 2.049e-49 Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV+NGFPLRIEAEKV K E N EF++ + KVDW AL AS+ +G ELPEE+D + D FL H LL++H+ EG+LVCPETGRRFP+N GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSSNIKGVVNGFPLRIEAEKVVEKTVEMNGEFLKKMFEKVDWKALVDASRAMGYTELPEEVDSSILDSDEFLNRFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|593685906|ref|XP_007143624.1| (hypothetical protein PHAVU_007G087400g [Phaseolus vulgaris] >gi|543177129|gb|AGV54586.1| hypothetical protein [Phaseolus vulgaris] >gi|561016814|gb|ESW15618.1| hypothetical protein PHAVU_007G087400g [Phaseolus vulgaris]) HSP 1 Score: 163.696 bits (413), Expect = 5.021e-49 Identity = 77/122 (63.11%), Postives = 91/122 (74.59%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV+NGFPLRIEAEKV K E N EF++ + KVDW A ASK +G ELPEE D + D FL H LL++H+ EG+LVCPETGRRFP++ GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSSNIKGVVNGFPLRIEAEKVAEKTVEMNGEFLKKMFEKVDWKAFVDASKAMGYTELPEEADSSMLDSDEFLNRFHHALLELHLEEGALVCPETGRRFPVSKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|1150091935|ref|XP_020231659.1| (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cajanus cajan] >gi|1012339813|gb|KYP51039.1| TRM112-like protein At1g78190 family [Cajanus cajan]) HSP 1 Score: 162.925 bits (411), Expect = 9.889e-49 Identity = 76/122 (62.30%), Postives = 91/122 (74.59%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV+NGFPLRIEAEKV K E N EF++ + K+DW A AS+ +G ELPEE D + D FL H LL++H+ EG+LVCPETGRRFP+N GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSSNIKGVVNGFPLRIEAEKVVEKTVEMNGEFLKKMFEKIDWKAFVDASRAMGYTELPEEADSSMLDSDEFLNRFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|596187860|ref|XP_007223437.1| (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Prunus persica] >gi|1139802500|gb|ONI35118.1| hypothetical protein PRUPE_1G517100 [Prunus persica]) HSP 1 Score: 162.155 bits (409), Expect = 1.948e-48 Identity = 74/122 (60.66%), Postives = 98/122 (80.33%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML SN+KGV NGFPLRIE EKV K+ +FN++F++N+ PK++W AL GA++ LG ELPEE++ + + FL+ H LL++H+ EG+LVCPETGRRFP++ GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSSNIKGVTNGFPLRIEIEKVVEKQVDFNADFLRNMFPKIEWKALVGAARTLGYVELPEEVEPSRLDSEDFLRKFHHALLELHLEEGALVCPETGRRFPVSKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|1201314501|gb|OVA14209.1| (Uncharacterized protein family UPF0434/Trm112 [Macleaya cordata]) HSP 1 Score: 161.77 bits (408), Expect = 3.185e-48 Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRL+THNML N+KGV NGFPLR+E EK KE EFNS+F++N+ K++W AL A++ +G +ELPEE D + D FL+ H LL++H+ EG+L+CPETGRRFP+N GIPNMLLHEDEV
Sbjct: 1 MRLLTHNMLSCNIKGVTNGFPLRLEVEKFVEKEVEFNSDFLKNMFVKIEWKALVNAARSMGYEELPEEADSSMLDSDEFLKKFHHALLELHLEEGALICPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29320.1 vs. NCBI_GenBank
Match: gi|351727645|ref|NP_001236144.1| (uncharacterized protein LOC100500562 [Glycine max] >gi|571562428|ref|XP_006605309.1| PREDICTED: uncharacterized protein LOC100500562 isoform X1 [Glycine max] >gi|571562432|ref|XP_006605310.1| PREDICTED: uncharacterized protein LOC100500562 isoform X1 [Glycine max] >gi|255630635|gb|ACU15677.1| unknown [Glycine max] >gi|734312603|gb|KHN00781.1| TRM112-like protein [Glycine soja] >gi|947042049|gb|KRG91773.1| hypothetical protein GLYMA_20G173300 [Glycine max]) HSP 1 Score: 160.999 bits (406), Expect = 5.383e-48 Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 0
Query: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
MRLITHNML SN+KGV+NGFPLRIEAEKV K E N EF++ + K+DW A AS+ +G ELPEE D + D FL H LL++H+ EG LVCPETGRRFP++ GIPNMLLHEDEV
Sbjct: 1 MRLITHNMLSSNIKGVVNGFPLRIEAEKVVEKTVEMNGEFLKKMFEKIDWKAFVDASRAMGYTELPEEADSSMLDSDEFLNRFHHALLELHLEEGVLVCPETGRRFPVSKGIPNMLLHEDEV 122 The following BLAST results are available for this feature:
BLAST of EWM29320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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