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Properties
| Property Name | Value |
|---|
| Product | gdp-l-galactose phosphorylase |
| Orig transcript id | gnl|cribi|Naga_100136g3.3175.mrna |
| Orig protein id | gnl|cribi|Naga_100136g3.3175 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:404234..406151 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1346 ID=rna1346|Name=rna1346|organism=Nannochloropsis gaditana|type=mRNA|length=3697bp
GTTGCAGACATTTGCAATGGGGCTTGCTCTCTTCCAGATGCCCCTCCCAA
AGGTATTCTTTACGACAAAGCCGGCATGGCCTGTGCTGACGACACCTCAA
ACAAAACCCTCTATTTATAGAACCATGGGGCCAGGGCTGTGTTTTCTTGC
CACAGCGGCCCTAATATGCTTATTGTCCAGACACGCTCTAGCCTACGAAT
GTACTATCACAAATCCACGGGTGGAGTACATGCCTTGTCCAGCTATGGGC
ATCGATGTAGCAAGCCCGCGATTCGGCTGGATAGTTGAATGTGCCTCGAC
TTCCTCCATCCATACTGCTGCATCTGGCTCCTCTTCACCTAATAGCAAGG
GCCCAAACGGGGCCGGCACACCGGTGCGAGGGACCTATCAGCAAGCTTTT
CAAATCATTGTCACGGCTGCCGATGCCGACGGTGCTGTAGTATGGGATTC
TGGACGTGTTGAGAGCATGGAGAGTCGTCACGTGGTGTTCGGCTCTGTGG
GACGAAGCCCGCAAGCTGCATTGAGCAGCGCCACGGCCTACGACTGGACC
GTTTCGGTGTGGGTCGCTACCGACGTTCCCCGCAAGAATGTAGCCTTGGA
AGGTCGGGCCAGGAATGTGGCGGGAAAGAAGATACTGAAGGTCCAGGATA
CTGGACGGCGAACCGGGAGTGCCCGGAGCCAAGCCATGCCAGCCGCGCGC
TTTGTAACCGGGATGCTGAACGTCACGCACGACCTGTCAGGGGCCCACTG
GCTGGTGGCGAAGAGCTCTGGGCAGAATCTGTGCCGGGCGCCGGTGCAGG
TGGGGGACGTGGCGGTGGAGCGCGCCGTGTTGCTAGTCGCCGGCCTGGGC
TATCACGTCGCCAGCCTGAATGGTCGGCGCGTCTCGGACGCGGAGCTCGA
GAGTGGCTGGACAGATTACGAGCGACGGGTACCTTACTCAGTGTACGACG
TGACAGGTCTGGTGCGAGGCCAGGGGGCGTGGAACGTGCTGGGCGTGGCC
CTGGGGAACGGATGGTATGCGACGTGGGGGGGGGGAGAGCCGTCCCGCGT
GCGAAAGACCTTCATTGCCAAGTTGTTCGTGAACGGGAAAGAGGTCCTAG
CCTCCACCGCGGCCACAAGAGCAGAGAAGAAAGGCCGTGGGGAAGGGGAT
GGCACCGCTGTGTCTTCGGAAAGGGGGGCCGACGACGCCCTCTGGGTCTG
TGGGGAGGGCCCGGTGGTCTACGACTCTCTGTATAATGGCGAGGTCTTCG
ACGCCAGGCGGGCGTCGCGCGTGCAAGGATGGGACACCCCTGAGTTCAAA
ATCGACTCGCATTGGGACTTCGCCATGATCGCTCCGGCACCCCCCCCGGG
GAAGTTGGTGGCCCCGAAGATGCCCCCTGTTCGTCGCGTGGCCGAGCTCC
CGGCCCTGTCGTTGAGCGAACCCGCACCCGGGGTCTTCGTCGTCGATTTC
GGGCAGAACATTGCCGGGCGGGTGGCCATCTCCTTGCCCCGGACAGGGAC
GGGAAACGTGACCTTACGCCACGCCGAGGTCTTGCAACACACGGGCATTA
CCGCACACCCCGTTCCGGGTATGATTTCTACGGACAACTTGCGCAGCGCG
CGGGCGACGGACGTGTACATGTATGGGGAAGGCCAGGGGCCAGACGGCAG
GTCTGGCCGTGGGGAAGGGGATGTGGTGGTTTACGAGCCCACGTTCACGT
ACCACGGCTTCCGCTACTTGGAAGTGCGCGGCTACGAGCCCCGTCTCAGC
GACGTCAAGGCCGTTGTCCTCCAGTCCGACGCGGCGCCCACGGGAAATAT
CGAATTTTCCGATTCACTCTTGAACCAGTTGCAAGCTGCTATTTTCTGGG
GCCAGCGGGGCAACCTGATGTCGGTCCCCACGGACTGCCCTCAGCGCGAC
GAGCGGAAGGGGTGGCTCGGGGACGCTCAGCTTTCCGGGGAGGAGGTCCT
TTTCAATTTCGACGTGGTGGCCACACTTATCAAATTCGTCCGGGATATCT
GTGACACGCAAAACGAAGTCGGTCAGATCGCGGACACGGCTCCGTTCACC
TTCGGGGGGCGTCCGGCCGACCCGTCCTGGGGCTCTGCCCTTCCCTCTCT
GGTCTTCTACCTCTTCACGGCCACCGGAGACACCCTGGTCCTCCAGGAAT
TTTATCCTTATTTGGTCAAATATCTGGACTCGCTTCTGGTGGCCGCTGAG
ATTGCGGGCCTCGCGAACCTCTACAAGTCCTACGGGGATTGGTGCGCCCT
CCCAGGGGTGCCCATGTGCTCGCCGCACTTGACCGGCTCCTTCTCTTTCT
TGGAGAATGTACGGCAAATGGCGGAGATGGCGGCTGCCTTGGGTAAGACC
CAAGATGAAAAGATATATCTGGCCTACCATCAAAGCTTCACACGGGCTTT
CCATGGGGCATTTTACCGCAATGGAACCTACGACAACGGCGTGCAGACAT
GTCTCGCCCTGCCGCTGTGGGCCGGGGCCGTACCACCCGACTTGCAGGAG
AGTATTGCCGACAAATTGGTCCGAGACTTGGTGGAGACCCACCGCTACCA
CGCCACGACTGGCATCATCGGGATGAAATACATGCTGGAGGTCCTCTCTC
GCATGGGGAAGACCGACGTGGCAGCCCGCATGCTGCAACAGCGGGACTAT
CCCTCCTTTGGCTACATGCTGACGAACCCCCACGAACCCGCCACGACCAT
CTGGGAACTCTGGAACGGCGACCAGGCGGGGCCGGAGATGAACAGCCGGA
ACCACGTCATGTTCGGAGGCTCCGTTGGGGGATGGCTGTACAAGTTCCTC
GGTGGTGTCCGCGCTGGCCCGGCCTCGCTGGCCGCCGCGGGCTATCGGGA
GGTGGAGTTTGCGCCGCCACTGGGGACGTGCATGCCCCTGACCAAGGTGT
CTACGTCCTTGCAGACCTTACAAGGGCGCGTGCGCATGGACTGGGAGCTA
GGGCCCTGCGAGGAAGCTTCACCGCCCTGGTCCTCGAAAGAGCTTCGGCC
CTCTACCAATTCCAGCAAGTCCTCTTGCCGGCGGCTCCTGACCTCGATCC
TCATCCCTCTCGGAAGCAGGGGCCACGTCATACTGGACGGTCGGACTCTT
GCACCTACGAGCCCTGCCTTTACCGTGCACATAGACGGCGTGGACGTGTT
GGAAGCCAGCCTGGAGCCCTGGGGACTGGAAGTGCTGCAGGCGACAGACA
GCCTGGTCGAGTTGAGTTTGACATCGGGCACGTGGATGATCGAGACACTC
TTTGAGGTAAATGCGGAGGCGGCTAGCCTTTGCGACACCGACACTGCCTT
CAGCTTGTCGCCAAGGGGCGGCGGTGGGGGTTACAGTGGCGGAATGCAGG
ACGCGACTGGCGCGGAGGGCGTGACCGCGACTTCCTAGCACGACAGGGGC
GGGGACTCAACGAATGGTAATAGCCACGTTACGATGATAGGGTGCAGGAA
CTAGGGTGTAGGGTGTATAACTTCTCATTGTGCGCGTGGACAATAGCGCC
TCTTCACTCTCGAATGTGGTCATTGCCAGCACATGACGGTAGACCTATGT
ATAGGGGGGGATGGGAGTTTGGCGATCAGGACATTCGAATGAAAGTATTC
AAGGACACTCCCTTTCGTAGCAAATAAAAAATTAAAGGCGATTGCTCACA
GCCAGCCGCAAAAGCGCAACACAATACAACACTAACGACAAAAATTG back to topprotein sequence of rna1346 >rna1346-protein ID=rna1346-protein|Name=rna1346|organism=Nannochloropsis gaditana|type=polypeptide|length=466bp
MSFLLLPLLVVIVHFRPHDPMTVESVDWASFWPCLVDPPEGTLAEVYGAR
GSEQDRDVFVYQKPFNFIPPQPSPPLSVKEYLLGLAGVRERCEIFDPRKL
GLGGLIKHRWDQKQKTGQFRTTVTGARIRSSQGTKSPWMVELYLNPGRSH
KPVSVPAKAVGNISQPYDPRAFSFLGAPARDVMFWYRTPRARDLQVNEHA
SEEGSKGGDGAEESWSTAMSCEPVDRATRGHARDLHAVLINPYPIGDLSG
VLVPFPFEERPQGLARSLDAITVGLTFASELLAGARRDDDRSTNLRVGFN
SIGAGASIGHLHFQFWRVVGGLDGRVPIERAPTWPPSPTSFDDVELAVIP
TNYHPIRSLVLSGRSIPALAKAAAHCVNVLMDRNIPFSLLMNGQHLYIMP
RRFANTTFPFASAGFPEAAGFLLVVNDTYWRDPSLLNADIVWDLWRESFD
VGEEMFNGILSACANA back to topmRNA from alignment at CM002457.1:404234..406151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1346 ID=rna1346|Name=rna1346|organism=Nannochloropsis gaditana|type=mRNA|length=1918bp|location=Sequence derived from alignment at CM002457.1:404234..406151- (Nannochloropsis gaditana)
CACCACAGGCTGGAAGGCTCGGGACGATGCGGTCCCGGGTCAATTTCCCC
ACGACCTTGACGGTCTCGCCTGATGATCCACACCCAGATCAGCGTGCAGG
CAGAAAGTCATGCTGGTTTATTACACGACGAGGTAGAGTGCCGTCATGGG
CCCTGGGAATTCGACGCCTCCTTGATGTTGACTGCGCCCTTAACCCATCC
ACGCAGGCACGAAGTCGTTTCAAGTGCTGACCATGTCGTTTCTCTTGCTG
CCTTTGCTGGTTGTGATCGTGCATTTCCGGCCCCACGATCCGATGACGGT
CGAAAGCGTGGACTGGGCTAGTTTCTGGCCCTGCCTCGTCGATCCTCCGG
AAGGCACTTTAGCTGAAGTATACGGAGCCCGTGGAAGCGAGCAAGACCGT
GACGTCTTCGTGTACCAGAAGCCTTTCAATTTTATTCCACCGCAACCCTC
GCCTCCTCTGTCGGTGAAGGAGTACCTTCTCGGACTGGTAAGTGGTTCAG
CCCATGCGTCGAAGCTGCCTTTGTAATGTTGATGTGAGTGGATATCTCTG
CGCCACAGGCAGGTGTGCGGGAGAGATGCGAAATCTTTGACCCTCGCAAG
CTGGGTTTGGGAGGGCTCATCAAGCACAGGTGGGACCAAAAGCAAAAGAC
GGGCCAATTCCGCACGACCGTGACAGGTGCCCGGATCCGCAGCTCCCAAG
GCACGAAATCGCCCTGGATGGTCGAGCTTTACCTGAATCCGGGTCGTTCC
CACAAGCCGGTCTCAGTGCCGGCCAAGGCCGTCGGAAACATCTCCCAGCC
CTACGATCCCCGAGCCTTCAGCTTCCTGGGAGCCCCGGCCAGGGACGTGA
TGTTCTGGTATCGAACGCCAAGGGCCCGGGACCTGCAGGTGAACGAGCAT
GCAAGCGAAGAGGGCAGCAAGGGGGGGGACGGGGCAGAGGAGTCTTGGTC
GACAGCCATGAGCTGCGAGCCAGTGGATAGGGCCACGCGCGGGCATGCGC
GCGACTTGCACGCTGTCCTCATCAATCCTTACCCCATCGGGGATCTCTCC
GGCGTTTTGGTTCCTTTTCCCTTCGAGGAACGCCCCCAGGGGCTTGCCAG
GTCCTTGGATGCGATAACTGTCGGTTTGACCTTCGCGAGTGAGCTGCTGG
CCGGGGCCAGACGGGATGACGACCGTTCGACGAATTTGCGCGTCGGTTTT
AATTCCATAGGTGCAGGGGCATCAATTGGCCACCTTCACTTTCAGTTCTG
GAGAGTTGTGGGTGGCTTGGACGGACGCGTGCCGATAGAACGAGCGCCGA
CGTGGCCACCGAGTCCGACATCTTTCGATGACGTGGAACTCGCGGTGATC
CCGACAAATTACCACCCCATCAGATCCCTGGTCTTATCTGGGCGCTCCAT
ACCTGCCTTGGCAAAAGCTGCGGCACATTGTGTCAATGTGCTGATGGATC
GAAATATTCCTTTCAGCTTGCTGATGAATGGGCAGCATTTGTACATCATG
CCCCGGCGTTTCGCGAACACAACGTTCCCATTCGCTTCCGCAGGATTCCC
TGAGGCAGCAGGATTTCTGCTGGTTGTAAACGACACTTACTGGCGGGATC
CTTCGTTGCTTAACGCGGATATTGTGTGGGATCTTTGGAGAGAATCATTT
GATGTGGGCGAGGAGATGTTTAACGGGATACTTTCAGCCTGTGCGAACGC
CTAGGAACCTGGACCAGAGTATTGTAAAATTCATTGGTACAACTAGTAAT
AATGTACACAAAAGGCAAGATGTACAAAATGCGTCCCGAATGAACTAGAA
AAGAAAGTATATAACGTATGTGCCTGTTGTACGTGCCCCCCCCCTGGGGC
AAGTTGAAGCCGAGAGACTGTTCTTCGCTGGCGTCGCAGCATCGTAATTA
AATTAATGTCTTACATCG back to topCoding sequence (CDS) from alignment at CM002457.1:404234..406151- >rna1346 ID=rna1346|Name=rna1346|organism=Nannochloropsis gaditana|type=CDS|length=2802bp|location=Sequence derived from alignment at CM002457.1:404234..406151- (Nannochloropsis gaditana)
GCAGGTGTGCGGGAGAGATGCGAAATCTTTGACCCTCGCAAGCTGGGTTT
GGGAGGGCTCATCAAGCACAGGTGGGACCAAAAGCAAAAGACGGGCCAAT
TCCGCACGACCGTGACAGGTGCCCGGATCCGCAGCTCCCAAGGCACGAAA
TCGCCCTGGATGGTCGAGCTTTACCTGAATCCGGGTCGTTCCCACAAGCC
GGTCTCAGTGCCGGCCAAGGCCGTCGGAAACATCTCCCAGCCCTACGATC
CCCGAGCCTTCAGCTTCCTGGGAGCCCCGGCCAGGGACGTGATGTTCTGG
TATCGAACGCCAAGGGCCCGGGACCTGCAGGTGAACGAGCATGCAAGCGA
AGAGGGCAGCAAGGGGGGGGACGGGGCAGAGGAGTCTTGGTCGACAGCCA
TGAGCTGCGAGCCAGTGGATAGGGCCACGCGCGGGCATGCGCGCGACTTG
CACGCTGTCCTCATCAATCCTTACCCCATCGGGGATCTCTCCGGCGTTTT
GGTTCCTTTTCCCTTCGAGGAACGCCCCCAGGGGCTTGCCAGGTCCTTGG
ATGCGATAACTGTCGGTTTGACCTTCGCGAGTGAGCTGCTGGCCGGGGCC
AGACGGGATGACGACCGTTCGACGAATTTGCGCGTCGGTTTTAATTCCAT
AGGTGCAGGGGCATCAATTGGCCACCTTCACTTTCAGTTCTGGAGAGTTG
TGGGTGGCTTGGACGGACGCGTGCCGATAGAACGAGCGCCGACGTGGCCA
CCGAGTCCGACATCTTTCGATGACGTGGAACTCGCGGTGATCCCGACAAA
TTACCACCCCATCAGATCCCTGGTCTTATCTGGGCGCTCCATACCTGCCT
TGGCAAAAGCTGCGGCACATTGTGTCAATGTGCTGATGGATCGAAATATT
CCTTTCAGCTTGCTGATGAATGGGCAGCATTTGTACATCATGCCCCGGCG
TTTCGCGAACACAACGTTCCCATTCGCTTCCGCAGGATTCCCTGAGGCAG
CAGGATTTCTGCTGGTTGTAAACGACACTTACTGGCGGGATCCTTCGTTG
CTTAACGCGGATATTGTGTGGGATCTTTGGAGAGAATCATTTGATGTGGG
CGAGGAGATGTTTAACGGGATACTTTCAGCCTGTGCGAACGCCTAGATGT
CGTTTCTCTTGCTGCCTTTGCTGGTTGTGATCGTGCATTTCCGGCCCCAC
GATCCGATGACGGTCGAAAGCGTGGACTGGGCTAGTTTCTGGCCCTGCCT
CGTCGATCCTCCGGAAGGCACTTTAGCTGAAGTATACGGAGCCCGTGGAA
GCGAGCAAGACCGTGACGTCTTCGTGTACCAGAAGCCTTTCAATTTTATT
CCACCGCAACCCTCGCCTCCTCTGTCGGTGAAGGAGTACCTTCTCGGACT
GGCAGGTGTGCGGGAGAGATGCGAAATCTTTGACCCTCGCAAGCTGGGTT
TGGGAGGGCTCATCAAGCACAGGTGGGACCAAAAGCAAAAGACGGGCCAA
TTCCGCACGACCGTGACAGGTGCCCGGATCCGCAGCTCCCAAGGCACGAA
ATCGCCCTGGATGGTCGAGCTTTACCTGAATCCGGGTCGTTCCCACAAGC
CGGTCTCAGTGCCGGCCAAGGCCGTCGGAAACATCTCCCAGCCCTACGAT
CCCCGAGCCTTCAGCTTCCTGGGAGCCCCGGCCAGGGACGTGATGTTCTG
GTATCGAACGCCAAGGGCCCGGGACCTGCAGGTGAACGAGCATGCAAGCG
AAGAGGGCAGCAAGGGGGGGGACGGGGCAGAGGAGTCTTGGTCGACAGCC
ATGAGCTGCGAGCCAGTGGATAGGGCCACGCGCGGGCATGCGCGCGACTT
GCACGCTGTCCTCATCAATCCTTACCCCATCGGGGATCTCTCCGGCGTTT
TGGTTCCTTTTCCCTTCGAGGAACGCCCCCAGGGGCTTGCCAGGTCCTTG
GATGCGATAACTGTCGGTTTGACCTTCGCGAGTGAGCTGCTGGCCGGGGC
CAGACGGGATGACGACCGTTCGACGAATTTGCGCGTCGGTTTTAATTCCA
TAGGTGCAGGGGCATCAATTGGCCACCTTCACTTTCAGTTCTGGAGAGTT
GTGGGTGGCTTGGACGGACGCGTGCCGATAGAACGAGCGCCGACGTGGCC
ACCGAGTCCGACATCTTTCGATGACGTGGAACTCGCGGTGATCCCGACAA
ATTACCACCCCATCAGATCCCTGGTCTTATCTGGGCGCTCCATACCTGCC
TTGGCAAAAGCTGCGGCACATTGTGTCAATGTGCTGATGGATCGAAATAT
TCCTTTCAGCTTGCTGATGAATGGGCAGCATTTGTACATCATGCCCCGGC
GTTTCGCGAACACAACGTTCCCATTCGCTTCCGCAGGATTCCCTGAGGCA
GCAGGATTTCTGCTGGTTGTAAACGACACTTACTGGCGGGATCCTTCGTT
GCTTAACGCGGATATTGTGTGGGATCTTTGGAGAGAATCATTTGATGTGG
GCGAGGAGATGTTTAACGGGATACTTTCAGCCTGTGCGAACGCCTAGATG
TCGTTTCTCTTGCTGCCTTTGCTGGTTGTGATCGTGCATTTCCGGCCCCA
CGATCCGATGACGGTCGAAAGCGTGGACTGGGCTAGTTTCTGGCCCTGCC
TCGTCGATCCTCCGGAAGGCACTTTAGCTGAAGTATACGGAGCCCGTGGA
AGCGAGCAAGACCGTGACGTCTTCGTGTACCAGAAGCCTTTCAATTTTAT
TCCACCGCAACCCTCGCCTCCTCTGTCGGTGAAGGAGTACCTTCTCGGAC
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