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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100028g1.3285.mrna |
| Orig protein id | gnl|cribi|Naga_100028g1.3285 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:244008..245362 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1288 ID=rna1288|Name=rna1288|organism=Nannochloropsis gaditana|type=mRNA|length=1259bp
ATCGAGCTCCTCGAGAAGGTACAGCGGTACGTGTCCAAGGCTCGGGCTCA
GGGGGTCTCGGAGGAGAGCTTGGTCATCACCCTTGATACCCTGGGGGTCT
TTGCCTGCTCGTGAGGCAAAAGAAAGGCAGGGAAGGAAGGAGGGAGGGAG
GGAGGGAGGGGTCCTCATGAGGAAGGCGTGGTGCGGCTGGGAGGGCGGAA
GAAGGTTGGATGATCGCCATGGAGTCGGAGTCGGAGGCAGGACGTATGTA
AGATATTGTAGGATAGGGCACGATCCGATCTTCTCGCCCTGGCGGTGACG
TAGTAAGAGTGGGCGAGGGGAGGGGAGGGAGAGGGCATGCGGTGGTGACG
TGCGGAGCGAGGGGCGTCGACAAAACGTGTATAGAATGGAAGGGAGGGAG
GGTGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGGAAAGGAGAGCCTTGT
GTGTGGATTGTGGGTGCGAAGGGGGAAAGAAATTGCGCGCTGCTTCGCCT
CACCAAGGAACCGGTGAGAAGGCACACGCTGGCCACCTCGCGATCCCCGC
AAATGGCCACCCACCATGAGCTTTCCTCTCGTCCTCCCTTCGCTTTTTAT
CTCTCCTTGCCCACGCGTTCCTCCTTGGCTACCCAGTCACTCCCTCTCCC
GGCGCTTCTTCCCTCATCCAACTCTCTCTTCCCAGAGTCTTGTGCCTTTT
CCTCCCCCCCTTTCCCCTCTGGATCCCCACGCTTCCTACCATAGCCTCCC
TATCGAAACCATTTTCCCTTCCCCCCCTTCCCCCTCGTTCTCTTTTATCC
CTCGCTCTGTCTCCTCTGGCGCCTCCCTGAATTTCCCACTTGGTTTGTCA
GATACGTTACCTCCTCACCCCGCTGCTTCCCCCCCTCCCACCCGCAGCCC
TCTCTTCCTCCGACCCCCTCTCTCTTCCTCCCCCTCTCCCCCACCTGTCC
TTTCTTCCTTTACACGGTGTTTCCTCCGACTGACTTTCTTCGCCCTAAAC
CCCAGCTCTCCCAGGTGGCTCTTGCCATCTTCCCCCTTCAGGCTTCCTCC
CCTCCTTCCCTCCCTCCTTCCCGTTCCATCATCCCCCAAGCCCCTTTCTC
CCTCCTCCCTCCTCCCTCCTCCTTCCTTCCTCCCTCTCCCAGCACTGAAA
AATTTGGCCGGGTGCTTATCCTCGTCAAATTAAGGCCCGCTCCCTGCTGA
CCCCATCCCTTCAGCTCATCCCGCCTACCCTTCGTCTCCTCCACCCCTGC
CGATCCTCC back to topprotein sequence of rna1288 >rna1288-protein ID=rna1288-protein|Name=rna1288|organism=Nannochloropsis gaditana|type=polypeptide|length=375bp
MGGACENRLERGLASLEASITLFITLSPAREQPIRLHLTGPVSCLREGPQ
GCVYVPGYFGHSGATRCSSPHSVASRHELQQPIMSPMRSSPRSFPYPARK
ASFVVSVLWLLLHLSLVAHGFSPGSVIRGPRASPGCPSASSPPPPGRALR
RVRGNIYVEVSSTAYPGTSGTRGGSSTPPLPASSGVRGDPVTVQQVFICT
SRWCMQRGAGATMGSFIGLTPYGSKVRVQGVDCLGRCNRGPNLRLLRSNG
TFEELSYVDSVDKVYDVFTSQLGIRINQSSADCLKLNFQGNAHLDKNEVD
RAIECYDKAIPLSHRGQEGVLRVMRSTAYLQRAYTHFMQFRELVEQAAQP
LPDQAFLAFLQATHASSPFLTGSTA back to topmRNA from alignment at CM002457.1:244008..245362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1288 ID=rna1288|Name=rna1288|organism=Nannochloropsis gaditana|type=mRNA|length=1355bp|location=Sequence derived from alignment at CM002457.1:244008..245362- (Nannochloropsis gaditana)
ATGGGAGGGGCGTGTGAAAACAGGCTTGAGCGAGGGCTGGCGAGCCTTGA
AGCCTCTATCACCCTTTTCATCACGCTCTCACCCGCACGGGAACAACCTA
TTCGTTTACACCTGACAGGACCGGTGTCATGTCTTCGTGAAGGGCCACAA
GGTTGCGTGTACGTTCCGGGATATTTTGGTCATAGCGGAGCCACACGGTG
CTCCTCGCCACATTCGGTCGCCTCGCGTCACGAGCTTCAACAACCCATTA
TGTCACCAATGCGGTCGAGTCCGAGATCATTCCCTTACCCCGCGCGTAAG
GCCTCCTTCGTGGTTTCAGTCTTGTGGTTACTTTTGCACCTGTCTCTGGT
TGCGCATGGATTTTCGCCAGGGTCTGTCATCCGCGGGCCACGTGCCTCGC
CCGGGTGCCCGTCAGCCTCCTCACCTCCCCCTCCTGGACGTGCATTAAGG
CGCGTCCGGGGCAATATCTACGTCGAAGTCAGCTCCACGGCCTACCCTGG
CACGTCTGGGACCAGGGGAGGGAGTTCGACGCCCCCTCTACCAGCTTCCA
GCGGGGTGCGTGGAGATCCGGTGACCGTACAGCAAGTTTTTATATGCACC
AGCCGGTGGTGCATGCAGCGTGGGGCTGGCGCGACGATGGGGAGTTTCAT
TGGCTTGACGCCCTATGGAAGCAAGGTGCGGGTGCAGGGTGTGGATTGCC
TCGGACGCTGCAACAGGGGTCCGAATCTGCGTCTGCTCCGATCGAATGGC
ACCTTTGAAGAGCTGAGTTATGTGGATTCCGTGGACAAGGCAAGCAAATG
GAGGGGAAATGAGGGCTTGGGATGTGGGCGAAGAGTGTATGTTCTCGGTT
GCCAATGAGTTGAACGGTCGCAATGATTTGGGTGCATTGCAGCGGATGCT
GGCGAAACGGCGTGTTTGCGTGCCTCGACCCTGACAAGAAACCAACGACG
GCCTCCCCTCCATTCAACAGGTATACGACGTATTCACCAGCCAGCTCGGC
ATCCGCATCAACCAGTCGTCGGCGGACTGCCTCAAGCTCAACTTCCAGGG
GAACGCTCATCTAGACAAGAATGAGGTGGACCGCGCGATCGAATGCTACG
ACAAGGCCATCCCCCTCTCCCACCGCGGCCAAGAAGGCGTCCTGCGGGTC
ATGCGTTCCACGGCCTACCTCCAACGTGCCTACACGCACTTCATGCAGTT
CCGGGAGCTGGTGGAACAGGCGGCGCAACCTCTTCCCGACCAGGCTTTCC
TCGCTTTCCTGCAGGCCACCCACGCCTCCTCCCCCTTCCTCGTCCTCCCC
GTGCTCGCCCACCTCTCCCGGGCCTACCAGGCTCGAGACCGGCTCTACCG
CCTGA back to topCoding sequence (CDS) from alignment at CM002457.1:244008..245362- >rna1288 ID=rna1288|Name=rna1288|organism=Nannochloropsis gaditana|type=CDS|length=3384bp|location=Sequence derived from alignment at CM002457.1:244008..245362- (Nannochloropsis gaditana)
ACCGGCTCTACCGCCTGAGTATACGACGTATTCACCAGCCAGCTCGGCAT
CCGCATCAACCAGTCGTCGGCGGACTGCCTCAAGCTCAACTTCCAGGGGA
ACGCTCATCTAGACAAGAATGAGGTGGACCGCGCGATCGAATGCTACGAC
AAGGCCATCCCCCTCTCCCACCGCGGCCAAGAAGGCGTCCTGCGGGTCAT
GCGTTCCACGGCCTACCTCCAACGTGCCTACACGCACTTCATGCAGTTCC
GGGAGCTGGTGGAACAGGCGGCGCAACCTCTTCCCGACCAGGCTTTCCTC
GCTTTCCTGCAGGCCACCCACGCCTCCTCCCCCTTCCTCATGGGAGGGGC
GTGTGAAAACAGGCTTGAGCGAGGGCTGGCGAGCCTTGAAGCCTCTATCA
CCCTTTTCATCACGCTCTCACCCGCACGGGAACAACCTATTCGTTTACAC
CTGACAGGACCGGTGTCATGTCTTCGTGAAGGGCCACAAGGTTGCGTGTA
CGTTCCGGGATATTTTGGTCATAGCGGAGCCACACGGTGCTCCTCGCCAC
ATTCGGTCGCCTCGCGTCACGAGCTTCAACAACCCATTATGTCACCAATG
CGGTCGAGTCCGAGATCATTCCCTTACCCCGCGCGTAAGGCCTCCTTCGT
GGTTTCAGTCTTGTGGTTACTTTTGCACCTGTCTCTGGTTGCGCATGGAT
TTTCGCCAGGGTCTGTCATCCGCGGGCCACGTGCCTCGCCCGGGTGCCCG
TCAGCCTCCTCACCTCCCCCTCCTGGACGTGCATTAAGGCGCGTCCGGGG
CAATATCTACGTCGAAGTCAGCTCCACGGCCTACCCTGGCACGTCTGGGA
CCAGGGGAGGGAGTTCGACGCCCCCTCTACCAGCTTCCAGCGGGGTGCGT
GGAGATCCGGTGACCGTACAGCAAGTTTTTATATGCACCAGCCGGTGGTG
CATGCAGCGTGGGGCTGGCGCGACGATGGGGAGTTTCATTGGCTTGACGC
CCTATGGAAGCAAGGTGCGGGTGCAGGGTGTGGATTGCCTCGGACGCTGC
AACAGGGGTCCGAATCTGCGTCTGCTCCGATCGAATGGCACCTTTGAAGA
GCTGAGTTATGTGGATTCCGTGGACAAGACCGGCTCTACCGCCTGAGTAT
ACGACGTATTCACCAGCCAGCTCGGCATCCGCATCAACCAGTCGTCGGCG
GACTGCCTCAAGCTCAACTTCCAGGGGAACGCTCATCTAGACAAGAATGA
GGTGGACCGCGCGATCGAATGCTACGACAAGGCCATCCCCCTCTCCCACC
GCGGCCAAGAAGGCGTCCTGCGGGTCATGCGTTCCACGGCCTACCTCCAA
CGTGCCTACACGCACTTCATGCAGTTCCGGGAGCTGGTGGAACAGGCGGC
GCAACCTCTTCCCGACCAGGCTTTCCTCGCTTTCCTGCAGGCCACCCACG
CCTCCTCCCCCTTCCTCATGGGAGGGGCGTGTGAAAACAGGCTTGAGCGA
GGGCTGGCGAGCCTTGAAGCCTCTATCACCCTTTTCATCACGCTCTCACC
CGCACGGGAACAACCTATTCGTTTACACCTGACAGGACCGGTGTCATGTC
TTCGTGAAGGGCCACAAGGTTGCGTGTACGTTCCGGGATATTTTGGTCAT
AGCGGAGCCACACGGTGCTCCTCGCCACATTCGGTCGCCTCGCGTCACGA
GCTTCAACAACCCATTATGTCACCAATGCGGTCGAGTCCGAGATCATTCC
CTTACCCCGCGCGTAAGGCCTCCTTCGTGGTTTCAGTCTTGTGGTTACTT
TTGCACCTGTCTCTGGTTGCGCATGGATTTTCGCCAGGGTCTGTCATCCG
CGGGCCACGTGCCTCGCCCGGGTGCCCGTCAGCCTCCTCACCTCCCCCTC
CTGGACGTGCATTAAGGCGCGTCCGGGGCAATATCTACGTCGAAGTCAGC
TCCACGGCCTACCCTGGCACGTCTGGGACCAGGGGAGGGAGTTCGACGCC
CCCTCTACCAGCTTCCAGCGGGGTGCGTGGAGATCCGGTGACCGTACAGC
AAGTTTTTATATGCACCAGCCGGTGGTGCATGCAGCGTGGGGCTGGCGCG
ACGATGGGGAGTTTCATTGGCTTGACGCCCTATGGAAGCAAGGTGCGGGT
GCAGGGTGTGGATTGCCTCGGACGCTGCAACAGGGGTCCGAATCTGCGTC
TGCTCCGATCGAATGGCACCTTTGAAGAGCTGAGTTATGTGGATTCCGTG
GACAAGACCGGCTCTACCGCCTGAGTATACGACGTATTCACCAGCCAGCT
CGGCATCCGCATCAACCAGTCGTCGGCGGACTGCCTCAAGCTCAACTTCC
AGGGGAACGCTCATCTAGACAAGAATGAGGTGGACCGCGCGATCGAATGC
TACGACAAGGCCATCCCCCTCTCCCACCGCGGCCAAGAAGGCGTCCTGCG
GGTCATGCGTTCCACGGCCTACCTCCAACGTGCCTACACGCACTTCATGC
AGTTCCGGGAGCTGGTGGAACAGGCGGCGCAACCTCTTCCCGACCAGGCT
TTCCTCGCTTTCCTGCAGGCCACCCACGCCTCCTCCCCCTTCCTCATGGG
AGGGGCGTGTGAAAACAGGCTTGAGCGAGGGCTGGCGAGCCTTGAAGCCT
CTATCACCCTTTTCATCACGCTCTCACCCGCACGGGAACAACCTATTCGT
TTACACCTGACAGGACCGGTGTCATGTCTTCGTGAAGGGCCACAAGGTTG
CGTGTACGTTCCGGGATATTTTGGTCATAGCGGAGCCACACGGTGCTCCT
CGCCACATTCGGTCGCCTCGCGTCACGAGCTTCAACAACCCATTATGTCA
CCAATGCGGTCGAGTCCGAGATCATTCCCTTACCCCGCGCGTAAGGCCTC
CTTCGTGGTTTCAGTCTTGTGGTTACTTTTGCACCTGTCTCTGGTTGCGC
ATGGATTTTCGCCAGGGTCTGTCATCCGCGGGCCACGTGCCTCGCCCGGG
TGCCCGTCAGCCTCCTCACCTCCCCCTCCTGGACGTGCATTAAGGCGCGT
CCGGGGCAATATCTACGTCGAAGTCAGCTCCACGGCCTACCCTGGCACGT
CTGGGACCAGGGGAGGGAGTTCGACGCCCCCTCTACCAGCTTCCAGCGGG
GTGCGTGGAGATCCGGTGACCGTACAGCAAGTTTTTATATGCACCAGCCG
GTGGTGCATGCAGCGTGGGGCTGGCGCGACGATGGGGAGTTTCATTGGCT
TGACGCCCTATGGAAGCAAGGTGCGGGTGCAGGGTGTGGATTGCCTCGGA
CGCTGCAACAGGGGTCCGAATCTGCGTCTGCTCCGATCGAATGGCACCTT
TGAAGAGCTGAGTTATGTGGATTCCGTGGACAAG back to top
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