EWM29460.1, cds1225 (CDS) Nannochloropsis gaditana

Overview
NameEWM29460.1
Unique Namecds1225
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:102085..102501 +
Alignment locationCM002457.1:102663..103049 +
Alignment locationCM002457.1:103307..103810 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29460.1
Producttryptophanyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100083g10.6787.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:102085..102501 +
CM002457.1supercontigCM002457.1:102663..103049 +
CM002457.1supercontigCM002457.1:103307..103810 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006436tryptophanyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003723RNA binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004830tryptophan-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR024109Trp-tRNA-ligase_bac-type
IPR001412aa-tRNA-synth_I_CS
IPR014729Rossmann-like_a/b/a_fold
IPR002305aa-tRNA-synth_Ic
IPR002306Trp-tRNA-ligase
Homology
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|585111996|gb|EWM29460.1| (tryptophanyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 905.975 bits (2340), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSLGRK 435
            MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSLGRK
Sbjct:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSLGRK 435          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|553192567|ref|XP_005855599.1| (tryptophanyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526] >gi|422293462|gb|EKU20762.1| tryptophanyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0
Identity = 405/407 (99.51%), Postives = 406/407 (99.75%), Query Frame = 0
Query:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTR 407
            MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDS APGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGI+PSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTR
Sbjct:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAFASLKTLSSTSRRRRIGRYGGMATMEASGTDSGAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIEPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTR 407          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|551654695|ref|XP_005830123.1| (hypothetical protein GUITHDRAFT_73319 [Guillardia theta CCMP2712] >gi|428174246|gb|EKX43143.1| hypothetical protein GUITHDRAFT_73319 [Guillardia theta CCMP2712])

HSP 1 Score: 506.908 bits (1304), Expect = 9.159e-177
Identity = 245/359 (68.25%), Postives = 284/359 (79.11%), Query Frame = 0
Query:   76 ASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKK---AKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYS 431
            A+  DS    K  Q+   RKRVLSGVQPTG+LHLGNYLGAIRQWVKNQDEYE++FCVVDLHAITAPH P  L++ +++ AALYLA+GIDP+KS +F+QSHV AH EL WLLNCVTPMNW+E+MIQ+KEKA KQGE+V +GLFDYPILMAADILLYQA LVPVGEDQRQHLEL RDIARRFNDQ+C KK   AK R+VFR+P ALIV EGARVMSL DGTSKMSKS  +D SRINLLD P+ I  +I           EWDNP RPECTNLLNIY +VT   G +KE +L EV  M WG FKPLL+EAV+AHL PIQ KY+++MED  +++++L  GA  AD IA QTL W K+AMGF S
Sbjct:    4 ATTVDSTDEQK--QESSVRKRVLSGVQPTGNLHLGNYLGAIRQWVKNQDEYENYFCVVDLHAITAPHVPSELQKSSLDIAALYLASGIDPAKSKVFIQSHVPAHAELCWLLNCVTPMNWMEKMIQYKEKAKKQGESVSIGLFDYPILMAADILLYQAQLVPVGEDQRQHLELARDIARRFNDQYCKKKSMPAKGRRVFREPEALIVKEGARVMSLQDGTSKMSKSDPSDLSRINLLDPPEVIGGRI-----------EWDNPERPECTNLLNIYQSVT---GKSKEDILSEVQHMQWGQFKPLLSEAVIAHLAPIQVKYKDLMEDQTYLKQVLLDGANSADLIAGQTLSWTKNAMGFTS 346          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|298706521|emb|CBJ29491.1| (tryptophanyl-tRNA synthetase [Ectocarpus siliculosus])

HSP 1 Score: 506.523 bits (1303), Expect = 5.819e-176
Identity = 244/367 (66.49%), Postives = 283/367 (77.11%), Query Frame = 0
Query:   70 GMATMEASGTDSA---APGKAEQ-QPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSL 432
            GM +M AS   S+   APGK    +   +KR++SGVQPTG+LH GNYLGAI+QWV NQD+Y++FF VVDLHAIT P DPK L+   I AAA YLAAGIDP KS +FVQSHV AH ELTWLL C TP+NWLE+MIQFKEK  KQGENVG GL  YP+LMA+DILLY+ DLVPVGEDQRQHLELTRD+ARRFNDQFC    +RRK F+DP ALIV EGARVMSL DGTSKMSKS   +GSRINL DSPD I  K++RCKTD   GLEWDNP RPECTNLL IY AVT   G T+E V  EV  M+WG FKPLL +A V HL P+Q +Y++++ED  ++ K+L  GA  AD +AS+TLGWAK+AMG  SL
Sbjct:   35 GMTSMSASEVASSTDVAPGKETSLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCK---RRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKLRRCKTDMHQGLEWDNPDRPECTNLLTIYQAVT---GKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSL 395          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|676392631|ref|XP_009039593.1| (hypothetical protein AURANDRAFT_70285 [Aureococcus anophagefferens] >gi|323449869|gb|EGB05754.1| hypothetical protein AURANDRAFT_70285 [Aureococcus anophagefferens])

HSP 1 Score: 492.656 bits (1267), Expect = 2.572e-171
Identity = 236/336 (70.24%), Postives = 276/336 (82.14%), Query Frame = 0
Query:   94 RKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGF 429
            R+RVLSGVQPTGSLHLGNYLGAIRQWV+ Q EY+S FCVVDLHAIT PHD K L +ET++AAALY+AAG++P  + IFVQSHV AH EL WLLNC+TPMNWLERMIQ+KEK  KQGENV VGLFDYP+LMAADILLYQADLVPVGEDQRQHLELTRDIARRF+D +C +K   R+VFR+P ALIV EGARVMSL DG +KMSKSA  DGSRINL+DSPD I +KIK+CKTD   GLEWDNP RPE TNLLNIY +VT   G  +E +L +V+ ++WGAFKP LT+A++AHL+PIQR Y+E+  D   + + L +GA  AD IA++TL  AK AMG 
Sbjct:    7 RERVLSGVQPTGSLHLGNYLGAIRQWVEYQHEYDSLFCVVDLHAITMPHDAKSLSRETLDAAALYIAAGVEPDIAPIFVQSHVSAHAELAWLLNCMTPMNWLERMIQYKEKKQKQGENVAVGLFDYPVLMAADILLYQADLVPVGEDQRQHLELTRDIARRFHDLYCKRK---RRVFREPKALIVKEGARVMSLADGKAKMSKSAPIDGSRINLVDSPDLIASKIKKCKTDQLKGLEWDNPNRPEATNLLNIYQSVT---GLEREVILRDVSDLSWGAFKPRLTDAIIAHLDPIQRAYKELAADQLFLSQTLKQGAHRADEIATKTLDDAKGAMGI 336          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|1210529205|dbj|GAX12351.1| (tryptophanyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 494.582 bits (1272), Expect = 8.465e-171
Identity = 248/377 (65.78%), Postives = 284/377 (75.33%), Query Frame = 0
Query:   76 ASGTDSAAPGKAEQQPERR-KRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYES------------FFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFC--NKKAK--------RRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGF 429
            A+  DS+AP  A+  P+ R KRVLSGVQPTGSLHLGNYLGAIRQWV+ QD  E+            FFCVVDLHAIT PHDP  L + T+ +AALYLAAGIDPSKS +FVQSHV AH ELTWLLNC+TPMNWLERMIQFKEKA KQGE+VGVGLFDYP+LMAADILLYQAD +PVGEDQRQHLEL RDI+RRF+D FC  NK  K         R VF +P A+IV  GAR+MSL DG SKMSKS  ND SRIN+LD PD IR KIK+CKTDA +GLEWDNP RPE TNLL I+ AV    G T+E +L EV  M WG FKP+L +A+V HLEPIQ +Y+ + ED E++ ++L  GA  AD IAS+TL  AK AMGF
Sbjct:   49 ATSADSSAP--ADSAPKTRIKRVLSGVQPTGSLHLGNYLGAIRQWVEFQDNAETQDEEGNLIRTENFFCVVDLHAITMPHDPTELTESTLSSAALYLAAGIDPSKSRVFVQSHVTAHAELTWLLNCITPMNWLERMIQFKEKARKQGESVGVGLFDYPVLMAADILLYQADQIPVGEDQRQHLELARDISRRFHDLFCKGNKYKKLCKAAGVPSRPVFVEPNAMIVKSGARIMSLSDGNSKMSKSDPNDASRINILDPPDVIREKIKKCKTDAQVGLEWDNPDRPEATNLLTIFQAVQ--PGRTREDILNEVGDMTWGQFKPVLADAIVNHLEPIQERYKAIREDDEYLWQVLKDGADAADEIASRTLKHAKIAMGF 421          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|676397413|ref|XP_009041984.1| (hypothetical protein AURANDRAFT_39388 [Aureococcus anophagefferens] >gi|323447381|gb|EGB03304.1| hypothetical protein AURANDRAFT_39388 [Aureococcus anophagefferens])

HSP 1 Score: 487.263 bits (1253), Expect = 1.440e-168
Identity = 239/366 (65.30%), Postives = 280/366 (76.50%), Query Frame = 0
Query:   64 RIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGF 429
            R G  G   +   S T   A   + +   RR+RVLSGVQPTGSLHLGNYLGAIRQWV+ Q EY+S FCVVD+HAIT PHD K L  ET++AAALY+AAG+DP  + IFVQSHV AH EL WLLNC+TP+NWLERMIQ+KEK  KQGE V VGLFDYP+LMAADILLYQA LVPVG+DQRQHLELTRDIARRF+D +C +K   ++VFR+P ALIV EG+RVMSL DGT KMSKSA  D SRINL D PD I +KIK+CKTD   GLEWDNP RPE  NLLNIY +VT   G   E++L EV+ ++WGAFKP LT+AVVAHLEPIQR Y+E+  D  ++ + L +GA  AD IA++TL  AK AMG 
Sbjct:   23 RYGPAGRGVSQSRSSTFVRASDASSEANLRRQRVLSGVQPTGSLHLGNYLGAIRQWVEYQHEYDSLFCVVDMHAITVPHDAKTLSSETMDAAALYIAAGVDPDIAPIFVQSHVSAHAELAWLLNCITPINWLERMIQYKEKKEKQGELVAVGLFDYPVLMAADILLYQAGLVPVGDDQRQHLELTRDIARRFHDMYCKRK---QRVFREPKALIVKEGSRVMSLTDGTVKMSKSAPLDNSRINLSDPPDLIASKIKKCKTDQVKGLEWDNPDRPEAANLLNIYQSVT---GLEHEAILREVSDLSWGAFKPRLTDAVVAHLEPIQRAYKEIAADQHYLSQTLKQGAYRADEIATRTLDDAKSAMGI 382          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|1210520161|dbj|GAX21044.1| (tryptophanyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 488.034 bits (1255), Expect = 2.063e-168
Identity = 248/402 (61.69%), Postives = 290/402 (72.14%), Query Frame = 0
Query:   51 ASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERR-KRVLSGVQPTGSLHLGNYLGAIRQWVKNQD------------EYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFC--NKKAK--------RRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGF 429
            A+   L+    R  I R+     + ++ T + +   A   P+ R KRVLSGVQPTGSLHLGNYLGAIRQWV+ QD            + E+FFCVVDLHAIT PHDP  L + T+ +AALYLAAGIDPSKS +FVQSHV AH ELTWLLNC+TPMNWLERMIQFKEKA KQGE+VGVGLFDYP+LMAADILLYQAD +PVGEDQRQHLEL RDI+RRF+D FC  NK  K         R VF +P A+IV  GAR+MSL DG SKMSKS  ND SRIN+LD PD IR KIK+CKTDA +GLEWDNP RPE TNLL I+ AV    G T+E +L EV  M WG FKP+L +A+V HL PIQ +Y+ + ED E++ ++L  GA  AD IAS+TL  AK AMGF
Sbjct:   10 AAFSPLAVRPHRGLISRHSPF-LLHSTATSADSSATAGSAPKTRIKRVLSGVQPTGSLHLGNYLGAIRQWVEFQDNAETQDEEGNLIQTENFFCVVDLHAITMPHDPTELTESTLSSAALYLAAGIDPSKSRVFVQSHVTAHAELTWLLNCITPMNWLERMIQFKEKARKQGESVGVGLFDYPVLMAADILLYQADQIPVGEDQRQHLELARDISRRFHDLFCKGNKYKKLCKAAGVPSRPVFVEPNAMIVKSGARIMSLSDGNSKMSKSDPNDASRINILDPPDVIREKIKKCKTDAQVGLEWDNPDRPEATNLLTIFQAVQ--PGRTREDILNEVRDMTWGQFKPVLADAIVNHLGPIQERYKAIREDDEYLWQVLKDGADAADEIASRTLKHAKIAMGF 408          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|873236094|emb|CEL99506.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 490.345 bits (1261), Expect = 1.902e-166
Identity = 224/341 (65.69%), Postives = 285/341 (83.58%), Query Frame = 0
Query:   93 RRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIK-QGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSL 432
            +R+RVLSG+QPTG+LHLGNY+GAIRQWVKNQD+Y+SFFC VDLHAIT PH P +LRQET++A ALY+A GIDP +S++FVQSHV AHTELTWLLNC+TP+ WLERMIQFKEK+ K   EN+GVGLF YP+LMA+DILLY+A++VPVGEDQ QH+ELTRD+ARRFND FC K+ +R+ VF +P  L+V EGARVMSLLDGT+KMSKS  N+GSRINLLD+P+TI+ KIK+CKTD   GLE+ NP RPECTNLL +  A+++      +++L++   + WGAFKP+LT+A+V HL PIQ++YR ++ DP +++ IL +GA  A+A+ASQTL  AKDAMG+ SL
Sbjct:   99 KRQRVLSGIQPTGALHLGNYVGAIRQWVKNQDKYDSFFCAVDLHAITLPHTPSKLRQETLQATALYVACGIDPDRSSVFVQSHVPAHTELTWLLNCITPVGWLERMIQFKEKSRKLSAENIGVGLFGYPVLMASDILLYKAEVVPVGEDQVQHIELTRDVARRFNDLFC-KRQRRKDVFVEPETLLVKEGARVMSLLDGTAKMSKSDPNEGSRINLLDTPETIQKKIKKCKTDPVQGLEYGNPDRPECTNLLTMLSAISD---QPVDAILQQYGDLGWGAFKPVLTDALVEHLGPIQQRYRNLVSDPSYLQSILRQGAEKANAVASQTLSEAKDAMGYLSL 435          
BLAST of EWM29460.1 vs. NCBI_GenBank
Match: gi|1072226988|gb|OEU11728.1| (tryptophanyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 477.633 bits (1228), Expect = 1.721e-164
Identity = 238/363 (65.56%), Postives = 279/363 (76.86%), Query Frame = 0
Query:   88 EQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWV--KNQDEY---------ESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFC--NKKAKR--------RKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGF 429
            +++P R +RVLSGVQPTGSLHLGNYLGAIRQWV  +N+D++         E+FFCVVDLHAIT PHDPK L++ T+ +AALYLAAGIDP+KS IFVQSHV AH+EL WLLNC+TPM WLERMIQFKEKA KQGE+VGVGLF YPILMAADI+LYQ+  VPVGEDQRQHLELTRDI RRFND FC  N   KR        R VF +P A+I+ EGARVMSL DG+SKMSKS  +D SRIN+LD P TIR KIKRCKTDA  G+EWDNP RPE TNLLNIY AV +    TKE +L+EV  M WG FKP++ +A+V HL PIQ +Y EV  DP+ + +IL +GA  A+ +A +TL   K AMGF
Sbjct:   25 KKKPIRPERVLSGVQPTGSLHLGNYLGAIRQWVDFQNEDQFNDDGEVVPVENFFCVVDLHAITMPHDPKDLQESTLSSAALYLAAGIDPTKSKIFVQSHVPAHSELAWLLNCITPMGWLERMIQFKEKAKKQGESVGVGLFSYPILMAADIMLYQSTKVPVGEDQRQHLELTRDIVRRFNDLFCKGNPYKKRCKAAGVPSRPVFVEPDAIILKEGARVMSLTDGSSKMSKSDPSDASRINVLDDPKTIRDKIKRCKTDAIPGIEWDNPDRPEATNLLNIYSAV-QPTKRTKEEILKEVGEMTWGEFKPVIADAIVNHLTPIQDRYYEVRNDPDALNEILKQGADAANEVAERTLLNTKVAMGF 386          
The following BLAST results are available for this feature:
BLAST of EWM29460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111996|gb|EWM29460.1|0.000e+0100.00tryptophanyl-trna synthetase [Nannochloropsis gadi... [more]
gi|553192567|ref|XP_005855599.1|0.000e+099.51tryptophanyl-tRNA synthetase, partial [Nannochloro... [more]
gi|551654695|ref|XP_005830123.1|9.159e-17768.25hypothetical protein GUITHDRAFT_73319 [Guillardia ... [more]
gi|298706521|emb|CBJ29491.1|5.819e-17666.49tryptophanyl-tRNA synthetase [Ectocarpus siliculos... [more]
gi|676392631|ref|XP_009039593.1|2.572e-17170.24hypothetical protein AURANDRAFT_70285 [Aureococcus... [more]
gi|1210529205|dbj|GAX12351.1|8.465e-17165.78tryptophanyl-tRNA synthetase [Fistulifera solaris][more]
gi|676397413|ref|XP_009041984.1|1.440e-16865.30hypothetical protein AURANDRAFT_39388 [Aureococcus... [more]
gi|1210520161|dbj|GAX21044.1|2.063e-16861.69tryptophanyl-tRNA synthetase [Fistulifera solaris][more]
gi|873236094|emb|CEL99506.1|1.902e-16665.69unnamed protein product [Vitrella brassicaformis C... [more]
gi|1072226988|gb|OEU11728.1|1.721e-16465.56tryptophanyl-tRNA synthetase [Fragilariopsis cylin... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1226rna1226Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications