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Properties
| Property Name | Value |
|---|
| Product | tryptophanyl-trna synthetase |
| Orig transcript id | gnl|cribi|Naga_100083g10.6787.mrna |
| Orig protein id | gnl|cribi|Naga_100083g10.6787 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:101664..103948 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1226 ID=rna1226|Name=rna1226|organism=Nannochloropsis gaditana|type=mRNA|length=216bp
ATGTTTACACATCTCCTTTCCACGACACGATCGCACAGAGATAGGTTTCG
TCCCCAACAAAAAGACGACGCGGTCGCTGCCGCCTTGTTGCCAGGAATAC
ATCAAATTGTGTCAAGGAGTTTAGCTACGCTGCTGCTTCAGTACTTCAAG
GGAAACCCCTCTCTGCATACTTACGTTCCGCGCGATAACCATGCGCCGTT
CAGCGCGAAGAGCTGA back to topprotein sequence of rna1226 >rna1226-protein ID=rna1226-protein|Name=rna1226|organism=Nannochloropsis gaditana|type=polypeptide|length=435bp
MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAACALRASHACHLSPTLAF
ASLKTLSSTSRRRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSG
VQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQE
TIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQ
FKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRD
IARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAEN
DGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVT
EGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEH
IEKILTRGATDADAIASQTLGWAKDAMGFYSLGRK back to topmRNA from alignment at CM002457.1:101664..103948+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1226 ID=rna1226|Name=rna1226|organism=Nannochloropsis gaditana|type=mRNA|length=2285bp|location=Sequence derived from alignment at CM002457.1:101664..103948+ (Nannochloropsis gaditana)
GTGCGATCGTGTCGTGGAAAGGAGATGTGTAAACATTTAAGTCGATAATG
CGGCAGAGTGCTCTGCTCGCTTTTTGTGTGGCTgagtgggcggagggcgt
TACATGCGTCAAAAAGGTTATCGTACActggcgtgggaggagagctgAAT
GTTTACCCGATTGCTTCATGCTTGGAAAGCATTCTTCTCGCGTGGATGCC
TGACGACTTTTGCCTCACGGTTGGCATGCGTTTTGGGGGCTTACAAGCTT
GATCATACCATACGCTTtactacctcccccccctcgtaTCTAAGCTCTCT
CCCATATACTCGTGGTATTTTTTAACCCGCAACGCAAAATACAGGGATAC
GTCTCCGTTCCTGCTTTTTAGTTTATTTTCGTGCGCAAGTTTGCAGCTTG
CTGCGTTTTCGCATCGATCGTATGCTGAAAGTTGCGTCtcattccttttt
cttcaagGCTTTCATGATTGGCAGCTTAATCAGGGCTACAGCAGCTGAAA
TTTTCCACACTTCAGCTGCGTGTGCTTTAAGGGCTAGCCATGCTTGTCAT
CTTTCCCCAACTCTAGCATTTGCCTCGTTGAAAACCCTCAGCTCTACGTC
CAGAAGAAGACGGATCGGCCGGTACGGTGGCATGGCAACAATGGAGGCGA
GTGGCACTGATAGCGCAGCTCCAGGGAAGGCTGAACAACAGCCCGAGCGG
CGAAAGCGTGTGCTATCCGGCGTCCAGCCGACAGGATCATTGCACCTCGG
TAATTACTTAGGGGCAATTCGACAATGGGTCAAAAATCAAGACGAGTACG
AGTCTTTCTTTTGTGTCGTGGATCTTCACGCCATCACGGTACGTGAATAC
TCTCGCTTTTATCGCTTCCTGGTTCGCAGTATCCCTTCTTTCAGTCTGCA
TCCGATGACCATAACTTGTGCTGGATCCACATGGTACGTGTCGAtcacct
ctcttcctccctctttctcctccatcccccttttcctctccctccccagg
caccCCACGATCCCAAACGCCTTCGGCAGGAGACCATCGAGGCCGCTGCC
TTGTACCTGGCTGCAGGTATCGATCCGAGTAAAAGCACGATTTTTGTCCA
GTCCCACGTCTTGGCCCATACCGAGCTGACCTGGTTGTTGAACTGCGTCA
CGCCTATGAACTGGTTGGAGCGCATGATTCAGTTCAAGGAAAAGGCGATC
AAGCAAGGAGAGAACGTCGGCGTGGGCCTTTTCGACTACCCGATCTTAAT
GGCTGCCGACATTTTGCTGTACCAGGCTGACTTGGTGCCCGTGGGGGAAG
ACCAACGGCAGCACTTGGAGTTGACCCGCGATATAGCCCGACGTTTCAAC
GACCAATTCTGCAACAAGAAGgccaaaagaagaaaggtatTGGAGGCTTG
ATGCCTTTGCGCCTTTGCAAATGTCAGGCTCGTGCATTTTTCCCTGTGTG
AACGTGAGGGCATGTGTCGCTCCTAGTGCCTGGGGTAGGGCCGTGGGAGC
GAGGCCGAGACGTTCTGTCCCGGCCTCTGCGTTCTATGGCATGAACTTCT
CGTCTgaacccccttccccccctcgtccttttcctttgtcgCTCTCTGCC
TCGTTCTTTCTCCTTTGGATCTTGTCTCCCGCTTTTTGGCCAGGTGTTCC
GAGACCCAGCGGCCTTGATCGTCACGGAAGGTGCCCGAGTGATGTCCCTC
TTGGACGGAACTAGCAAGATGAGCAAAAGCGCGGAAAACGACGGGAGCCG
CATCAATCTCTTGGACAGCCCCGACACGATTCGCGCCAAAATCAAACGCT
GCAAGACAGACGCGTCGCTGGGCTTGGAATGGGACAACCCCGCCCGTCCG
GAATGCACAAATTTGTTGAACATCTACCTGGCCGTGacggaaggggcggg
ggcgacgaaggagagcgtgttggaggaggtggcggggatgAATTGGGGGG
CGTTCAAACCTTTGTTGACcgaggccgtggtggcgcaTTTGGAGCCGATC
CAACGGAAGTAccgggaggtgatggaggatCCCGAGCACATTGAAAAAAT
CTTGACCCGAGGTGCGACGGACGCCGACGCGATTGCGAGTCAGACGTTGG
GATGGGCGAAGGACGCCATGGGCTTCTATTCGCTGGGCAGGAAGTGagga
gcgggggaagggagggagggagggagggcggggagggagggtgctcGGAT
GCGTATGCGGGGACTTGGCAGGGGCGTGCACTGATTTAACAAAGTTTATC
CGCATGAAAGAAAGGAGTTTAAGTGACTCAAGCAC back to topCoding sequence (CDS) from alignment at CM002457.1:101664..103948+ >rna1226 ID=rna1226|Name=rna1226|organism=Nannochloropsis gaditana|type=CDS|length=3924bp|location=Sequence derived from alignment at CM002457.1:101664..103948+ (Nannochloropsis gaditana)
ATGCTGAAAGTTGCGTCtcattcctttttcttcaagGCTTTCATGATTGG
CAGCTTAATCAGGGCTACAGCAGCTGAAATTTTCCACACTTCAGCTGCGT
GTGCTTTAAGGGCTAGCCATGCTTGTCATCTTTCCCCAACTCTAGCATTT
GCCTCGTTGAAAACCCTCAGCTCTACGTCCAGAAGAAGACGGATCGGCCG
GTACGGTGGCATGGCAACAATGGAGGCGAGTGGCACTGATAGCGCAGCTC
CAGGGAAGGCTGAACAACAGCCCGAGCGGCGAAAGCGTGTGCTATCCGGC
GTCCAGCCGACAGGATCATTGCACCTCGGTAATTACTTAGGGGCAATTCG
ACAATGGGTCAAAAATCAAGACGAGTACGAGTCTTTCTTTTGTGTCGTGG
ATCTTCACGCCATCACGgcaccCCACGATCCCAAACGCCTTCGGCAGGAG
ACCATCGAGGCCGCTGCCTTGTACCTGGCTGCAGGTATCGATCCGAGTAA
AAGCACGATTTTTGTCCAGTCCCACGTCTTGGCCCATACCGAGCTGACCT
GGTTGTTGAACTGCGTCACGCCTATGAACTGGTTGGAGCGCATGATTCAG
TTCAAGGAAAAGGCGATCAAGCAAGGAGAGAACGTCGGCGTGGGCCTTTT
CGACTACCCGATCTTAATGGCTGCCGACATTTTGCTGTACCAGGCTGACT
TGGTGCCCGTGGGGGAAGACCAACGGCAGCACTTGGAGTTGACCCGCGAT
ATAGCCCGACGTTTCAACGACCAATTCTGCAACAAGAAGgccaaaagaag
aaagGTGTTCCGAGACCCAGCGGCCTTGATCGTCACGGAAGGTGCCCGAG
TGATGTCCCTCTTGGACGGAACTAGCAAGATGAGCAAAAGCGCGGAAAAC
GACGGGAGCCGCATCAATCTCTTGGACAGCCCCGACACGATTCGCGCCAA
AATCAAACGCTGCAAGACAGACGCGTCGCTGGGCTTGGAATGGGACAACC
CCGCCCGTCCGGAATGCACAAATTTGTTGAACATCTACCTGGCCGTGacg
gaaggggcgggggcgacgaaggagagcgtgttggaggaggtggcggggat
gAATTGGGGGGCGTTCAAACCTTTGTTGACcgaggccgtggtggcgcaTT
TGGAGCCGATCCAACGGAAGTAccgggaggtgatggaggatCCCGAGCAC
ATTGAAAAAATCTTGACCCGAGGTGCGACGGACGCCGACGCGATTGCGAG
TCAGACGTTGGGATGGGCGAAGGACGCCATGGGCTTCTATTCGCTGGGCA
GGAAGTGaATGCTGAAAGTTGCGTCtcattcctttttcttcaagGCTTTC
ATGATTGGCAGCTTAATCAGGGCTACAGCAGCTGAAATTTTCCACACTTC
AGCTGCGTGTGCTTTAAGGGCTAGCCATGCTTGTCATCTTTCCCCAACTC
TAGCATTTGCCTCGTTGAAAACCCTCAGCTCTACGTCCAGAAGAAGACGG
ATCGGCCGGTACGGTGGCATGGCAACAATGGAGGCGAGTGGCACTGATAG
CGCAGCTCCAGGGAAGGCTGAACAACAGCCCGAGCGGCGAAAGCGTGTGC
TATCCGGCGTCCAGCCGACAGGATCATTGCACCTCGGTAATTACTTAGGG
GCAATTCGACAATGGGTCAAAAATCAAGACGAGTACGAGTCTTTCTTTTG
TGTCGTGGATCTTCACGCCATCACGgcaccCCACGATCCCAAACGCCTTC
GGCAGGAGACCATCGAGGCCGCTGCCTTGTACCTGGCTGCAGGTATCGAT
CCGAGTAAAAGCACGATTTTTGTCCAGTCCCACGTCTTGGCCCATACCGA
GCTGACCTGGTTGTTGAACTGCGTCACGCCTATGAACTGGTTGGAGCGCA
TGATTCAGTTCAAGGAAAAGGCGATCAAGCAAGGAGAGAACGTCGGCGTG
GGCCTTTTCGACTACCCGATCTTAATGGCTGCCGACATTTTGCTGTACCA
GGCTGACTTGGTGCCCGTGGGGGAAGACCAACGGCAGCACTTGGAGTTGA
CCCGCGATATAGCCCGACGTTTCAACGACCAATTCTGCAACAAGAAGgcc
aaaagaagaaagGTGTTCCGAGACCCAGCGGCCTTGATCGTCACGGAAGG
TGCCCGAGTGATGTCCCTCTTGGACGGAACTAGCAAGATGAGCAAAAGCG
CGGAAAACGACGGGAGCCGCATCAATCTCTTGGACAGCCCCGACACGATT
CGCGCCAAAATCAAACGCTGCAAGACAGACGCGTCGCTGGGCTTGGAATG
GGACAACCCCGCCCGTCCGGAATGCACAAATTTGTTGAACATCTACCTGG
CCGTGacggaaggggcgggggcgacgaaggagagcgtgttggaggaggtg
gcggggatgAATTGGGGGGCGTTCAAACCTTTGTTGACcgaggccgtggt
ggcgcaTTTGGAGCCGATCCAACGGAAGTAccgggaggtgatggaggatC
CCGAGCACATTGAAAAAATCTTGACCCGAGGTGCGACGGACGCCGACGCG
ATTGCGAGTCAGACGTTGGGATGGGCGAAGGACGCCATGGGCTTCTATTC
GCTGGGCAGGAAGTGaATGCTGAAAGTTGCGTCtcattcctttttcttca
agGCTTTCATGATTGGCAGCTTAATCAGGGCTACAGCAGCTGAAATTTTC
CACACTTCAGCTGCGTGTGCTTTAAGGGCTAGCCATGCTTGTCATCTTTC
CCCAACTCTAGCATTTGCCTCGTTGAAAACCCTCAGCTCTACGTCCAGAA
GAAGACGGATCGGCCGGTACGGTGGCATGGCAACAATGGAGGCGAGTGGC
ACTGATAGCGCAGCTCCAGGGAAGGCTGAACAACAGCCCGAGCGGCGAAA
GCGTGTGCTATCCGGCGTCCAGCCGACAGGATCATTGCACCTCGGTAATT
ACTTAGGGGCAATTCGACAATGGGTCAAAAATCAAGACGAGTACGAGTCT
TTCTTTTGTGTCGTGGATCTTCACGCCATCACGgcaccCCACGATCCCAA
ACGCCTTCGGCAGGAGACCATCGAGGCCGCTGCCTTGTACCTGGCTGCAG
GTATCGATCCGAGTAAAAGCACGATTTTTGTCCAGTCCCACGTCTTGGCC
CATACCGAGCTGACCTGGTTGTTGAACTGCGTCACGCCTATGAACTGGTT
GGAGCGCATGATTCAGTTCAAGGAAAAGGCGATCAAGCAAGGAGAGAACG
TCGGCGTGGGCCTTTTCGACTACCCGATCTTAATGGCTGCCGACATTTTG
CTGTACCAGGCTGACTTGGTGCCCGTGGGGGAAGACCAACGGCAGCACTT
GGAGTTGACCCGCGATATAGCCCGACGTTTCAACGACCAATTCTGCAACA
AGAAGgccaaaagaagaaagGTGTTCCGAGACCCAGCGGCCTTGATCGTC
ACGGAAGGTGCCCGAGTGATGTCCCTCTTGGACGGAACTAGCAAGATGAG
CAAAAGCGCGGAAAACGACGGGAGCCGCATCAATCTCTTGGACAGCCCCG
ACACGATTCGCGCCAAAATCAAACGCTGCAAGACAGACGCGTCGCTGGGC
TTGGAATGGGACAACCCCGCCCGTCCGGAATGCACAAATTTGTTGAACAT
CTACCTGGCCGTGacggaaggggcgggggcgacgaaggagagcgtgttgg
aggaggtggcggggatgAATTGGGGGGCGTTCAAACCTTTGTTGACcgag
gccgtggtggcgcaTTTGGAGCCGATCCAACGGAAGTAccgggaggtgat
ggaggatCCCGAGCACATTGAAAAAATCTTGACCCGAGGTGCGACGGACG
CCGACGCGATTGCGAGTCAGACGTTGGGATGGGCGAAGGACGCCATGGGC
TTCTATTCGCTGGGCAGGAAGTGa back to top
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