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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100128g4.9396.mrna |
| Orig protein id | gnl|cribi|Naga_100128g4.9396 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:2819..5441 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1193 ID=rna1193|Name=rna1193|organism=Nannochloropsis gaditana|type=mRNA|length=594bp
ATGACTGCTTTAATTGAAGAGGTAAAATCTTGTGATGAGAAGAATGCCAA
GGGTAACTTCACGCTCAAGAAGTACCTGAAAGGAGCGGCAGCGAATCTTA
CCGGAAAATTCCGCTTGGATAAAGATGGAGCTGGTGCGCTTAAAGCACTC
ACAGACAAATATGAATTGAGAGGGGAAACGCAAAAAGCGTTACTCATGTC
TGAATTTAGTCACCTTACCTTCGATGAGAATGGTGACCCAAGTGAGACTT
TTGAAGCAGCGGAAGAACTTGCCAGAAAGATAAAGCATCGATTCGATTTG
GAAATCGATGAATCTATGCTACTGACTCACTTGATTAATAAAATTCCATC
GGCATATGGAATGGTAAGAGTGAGTTTGGAAACTCAAGATTCTATGACGT
ATCCTAATTTGAAGCCCAAAATGATCAACCATTTTGGGACGAATCTAACC
AATAAGGTCAAGAATGACCAGTGCTTAACAGGTAATTTTAACGGGTACTG
CAATTGGTGGAGAAAATACGGGCATAAAGAACAGGAATGCCTCGTAAAGA
AAAATGGTGGAGGTCGAGTAGGACCTCCTAACAATGGAAAATAG back to topprotein sequence of rna1193 >rna1193-protein ID=rna1193-protein|Name=rna1193|organism=Nannochloropsis gaditana|type=polypeptide|length=356bp
MLLSRLPRNKSKFYIHKMLLRLTIPQAISHRTQGCLRRAHAAVGHTAAYT
INSGSFKLVFISTIMVNTSDDRDMPSSRSQGLGLEKLDSDYEESASRFSS
SLPSVDMNAAINTLKRCEDRYKTEITKIGRNLRTFFETQLDPSSPSSTDK
TLESMYSDYNLTIFSHSLIGGAFGYVLARSVTTRLGPSSRLFAVVSFTGL
SSMLAASAATSLATTDLVKKAMEVVAADGSKKEGTQKSWPYLLTCRPVLQ
LKECVDGPCRDLLLGGKVQGGVGFVQAYHQCRRRADLWATQDEFLAIQEE
EGLRDVYEDEEELESENTIEQECSKEQGPPPWRENDKRKHEARASGDSSN
AGQGWR back to topmRNA from alignment at CM002457.1:2819..5441- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1193 ID=rna1193|Name=rna1193|organism=Nannochloropsis gaditana|type=mRNA|length=2623bp|location=Sequence derived from alignment at CM002457.1:2819..5441- (Nannochloropsis gaditana)
GCAGTAAGTGCAGTTGCTGATCGAAACCATCATCAGGACGGCTCATTCCT
TGGCACCTCCCCTTGAGTCTGCTTCGGCGAGACGGTTCTGCTCCTCGCAA
GGATCTTGTCGAGCATAATGTATTTGACTGTATCACAGTTATTAAATGCT
CCTATCTCGACTTCCACGGAACAAGAGTAAATTCTATATTCATAAAATGC
TCCTGCGATTGACAATTCCTCAAGCTATCTCACATCGTACACAGGGTTGT
CTACGACGTGCACACGCAGCGGTTGGGCATACAGCTGCATATACCATCAA
CTCGGGCTCTTTTAAACTCGTTTTCATTTCCACGATCATGGTCAATACGA
GCGATGACCGTGATATGCCTTCTTCCAGGAGTCAGGGTCTTGGACTTGAA
AAGTTGGACTCCGATTACGAAGAGTCCGCTTCCAGATTTTCCTCATCCCT
TCCTTCCGTTGACATGAATGCTGCTATAAACACACTCAAGCGTTGCGAGG
ACCGCTATAAAACTGAGATCACAAAGATTGGTCGTAATCTTCGGACATTC
TTCGAGACACAATTGGATCCCAGCTCGCCGTCTTCGACAGACAAGACCCT
CGAGAGCATGTACAGCGACTACAACCTCACGATTTTCTCACACTCCCTCA
TTGGAGGAGCTTTCGGCTATGTCTTGGCCCGCTCTGTTACCACGCGACTT
GGACCTTCGTCACGTTTATTCGCCGTCGTCTCCTTTACCGGGCTAAGCTC
CATGCTTGCCGCAAGTGCAGCTACCAGTCTGGCCACCACAGACCTTGTCA
AAAAGGCAATGGAGGTCGTCGCCGCGGATGGCAGCAAGAAAGAGGGGACA
CAGAAGTCTTGGCCTTACCTGCTAACTTGTCGACCTGTCTTACAATTGAA
GGAGTGTGTGGATGGGCCATGTCGTGATCTTTTACTGGGAGGCAAGGTGC
AGGGAGGAGTAGGCTTCGTCCAAGCATATCACCAATGCCGGCGTCGAGCA
GACTTGTGGGCGACTCAGGATGAGTTTTTGGCAATTCAAGAAGAGGAAGG
GCTCAGGGACGTGTACGAAGATGAAGAAGAACTAGAATCAGAAAATACCA
TTGAGCAAGAATGCTCTAAAGAGCAGGGCCCTCCCCCCTGGAGAGAGAAT
GATAAGCGAAAGCACGAGGCGAGAGCTAGCGGCGACAGTAGCAATGCTGG
TCAAGGATGGCGATGACACTATGAATATAAAATGGCTGAACCTGCTCTTT
GAATTTTAAGGGGAATCTGAAGCCAAAGATACACGAGGAACGCAGCACGG
CCCAGAAGCAGTATGACTGGAGATTTGTACGACCCAGAAAAAGCAAGATG
ACAACAAAAAGATTAACCTCTTCCCCCCTCCTTTATGACCGCAATTTTAG
GGTTAGCGTTTCTTGTGTGCGGTTGATGATAAACATTTGACGCGTGGTGG
GCCCATTTTGTCTAGGCACCTATAAGTCATGGTATCCGAACGGCGAGAGT
ACTGAAAGAGTCATGTCTAATCTGGGAGGTGACCTTTTCCTCCATGAAGG
CACGCTTGATCGGTCAAATCGACAGTGGTACTTGATTTGGCGCTCATGAT
AAGGCAAAGGAGGGATTATGTTATCGCGCAAAGGAAAACGAGCCTTTACA
CTGTCCACATAGCCTGATCAAAGTTCAACTTTTGGGAGAGCATTTTAAAG
AGTCACGTCAACTATAGAAGGATGATATTAGAGAATGGACCTACCTCTTC
AATCAACGTTATGTATTACATGTCCTCAAATGGTCTTTCAATTAGCACTC
TGGTATCTGAGCACCTCTGATTTGAACATCGGCCTCCGGGAAGCAAGAAA
AAAGCAAGTTCTCTCCATGGCTTTTCGGGTACGGTCATCACTTCCACTAA
GCCAAGTGGACCCCTCCTCTGTGAGAAGAACGGGCTGATCTACGCCAATG
AGAGCTAATAAATCGCTGAGAGCCTGGCGGCAGCAGCAGCAGACATAATG
GATCTGGCGAAAACGGACTGCAGCATCCTTACGCGAGGGTCGGGCTTCGG
AAAGCTGATTGCCTGGCTGAATATGCGCTGGCAGAATGTTTGGTGGCTCT
CGCCAGGGGAGCCTGACTTGCACGCGTGCGGGGCAAGGTCGTACGTGCAG
CCAGAGAACCTTGCGGACAAGTCGAGCCACCTGTAAAAGAGGAATCAGAG
AAGCGGGAAGGAAGGAAGAAGCACTACGACTTATTTCAAGTGATCTTGTA
CCTTATAGTACATGCGGAGATGACTAAATTGATAAAATTTGCCTTCCTGC
ACAAGAGCCGCGGATGCCGTCGGCTACTTAGAGAAAGCGTCTTAGGCCAA
GAGAGAGAGCACGCTTCAGGGAGCTAGAAATCGAAGGGGGCTCCGTTACG
TTTAGGTTATCGAATAAGCAACTCATTCGTTCATATTATAGCAGTGTTCA
CCGCTATAATATAACCATTTCCGCCGTGCAATCCTTTGTCACGACAACTT
CCATTACGGCCTCCACGGCCTCCATTTCCCCGTCCGAAATCATTGCGCCG
GCCTTTGCCAGGGCCATTGTTGGGTTTGCCACCTACACACTCATACCGGC
CGAATCTATTTTCCATTGTTAGG back to topCoding sequence (CDS) from alignment at CM002457.1:2819..5441- >rna1193 ID=rna1193|Name=rna1193|organism=Nannochloropsis gaditana|type=CDS|length=1071bp|location=Sequence derived from alignment at CM002457.1:2819..5441- (Nannochloropsis gaditana)
ATGCTCCTATCTCGACTTCCACGGAACAAGAGTAAATTCTATATTCATAA
AATGCTCCTGCGATTGACAATTCCTCAAGCTATCTCACATCGTACACAGG
GTTGTCTACGACGTGCACACGCAGCGGTTGGGCATACAGCTGCATATACC
ATCAACTCGGGCTCTTTTAAACTCGTTTTCATTTCCACGATCATGGTCAA
TACGAGCGATGACCGTGATATGCCTTCTTCCAGGAGTCAGGGTCTTGGAC
TTGAAAAGTTGGACTCCGATTACGAAGAGTCCGCTTCCAGATTTTCCTCA
TCCCTTCCTTCCGTTGACATGAATGCTGCTATAAACACACTCAAGCGTTG
CGAGGACCGCTATAAAACTGAGATCACAAAGATTGGTCGTAATCTTCGGA
CATTCTTCGAGACACAATTGGATCCCAGCTCGCCGTCTTCGACAGACAAG
ACCCTCGAGAGCATGTACAGCGACTACAACCTCACGATTTTCTCACACTC
CCTCATTGGAGGAGCTTTCGGCTATGTCTTGGCCCGCTCTGTTACCACGC
GACTTGGACCTTCGTCACGTTTATTCGCCGTCGTCTCCTTTACCGGGCTA
AGCTCCATGCTTGCCGCAAGTGCAGCTACCAGTCTGGCCACCACAGACCT
TGTCAAAAAGGCAATGGAGGTCGTCGCCGCGGATGGCAGCAAGAAAGAGG
GGACACAGAAGTCTTGGCCTTACCTGCTAACTTGTCGACCTGTCTTACAA
TTGAAGGAGTGTGTGGATGGGCCATGTCGTGATCTTTTACTGGGAGGCAA
GGTGCAGGGAGGAGTAGGCTTCGTCCAAGCATATCACCAATGCCGGCGTC
GAGCAGACTTGTGGGCGACTCAGGATGAGTTTTTGGCAATTCAAGAAGAG
GAAGGGCTCAGGGACGTGTACGAAGATGAAGAAGAACTAGAATCAGAAAA
TACCATTGAGCAAGAATGCTCTAAAGAGCAGGGCCCTCCCCCCTGGAGAG
AGAATGATAAGCGAAAGCACGAGGCGAGAGCTAGCGGCGACAGTAGCAAT
GCTGGTCAAGGATGGCGATGA back to top
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