EWM29518.1, cds1162 (CDS) Nannochloropsis gaditana

Overview
NameEWM29518.1
Unique Namecds1162
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1366502..1366586 -
Alignment locationCM002456.1:1366021..1366357 -
Alignment locationCM002456.1:1365419..1365512 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29518.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g1.8607.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1366502..1366586 -
CM002456.1supercontigCM002456.1:1366021..1366357 -
CM002456.1supercontigCM002456.1:1365419..1365512 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29518.1 vs. NCBI_GenBank
Match: gi|585112089|gb|EWM29518.1| (hypothetical protein Naga_100006g1 [Nannochloropsis gaditana])

HSP 1 Score: 329.331 bits (843), Expect = 8.183e-114
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MPHGSLGSPSAHSQADLEAGGISPRAYRDGRAAEEQQGTVDGPGRETDRGTDAHRKNGQAREERSPHLDRAVAKTFVGVGESSGGRERGAFPLPRDALPGHDGGGGGRLDPTPGGPTAGEGTEEERGVGAVPRQPWGAGRRPKKKGAVTPAAAGLGDKRSTSWDPAGRKGF 171
            MPHGSLGSPSAHSQADLEAGGISPRAYRDGRAAEEQQGTVDGPGRETDRGTDAHRKNGQAREERSPHLDRAVAKTFVGVGESSGGRERGAFPLPRDALPGHDGGGGGRLDPTPGGPTAGEGTEEERGVGAVPRQPWGAGRRPKKKGAVTPAAAGLGDKRSTSWDPAGRKGF
Sbjct:    1 MPHGSLGSPSAHSQADLEAGGISPRAYRDGRAAEEQQGTVDGPGRETDRGTDAHRKNGQAREERSPHLDRAVAKTFVGVGESSGGRERGAFPLPRDALPGHDGGGGGRLDPTPGGPTAGEGTEEERGVGAVPRQPWGAGRRPKKKGAVTPAAAGLGDKRSTSWDPAGRKGF 171
The following BLAST results are available for this feature:
BLAST of EWM29518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112089|gb|EWM29518.1|8.183e-114100.00hypothetical protein Naga_100006g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1163rna1163Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications