|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100006g1.8607.mrna |
| Orig protein id | gnl|cribi|Naga_100006g1.8607 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1365419..1366605 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1163 ID=rna1163|Name=rna1163|organism=Nannochloropsis gaditana|type=mRNA|length=921bp
ACTGTCCTGTGCGATTTTGTGTGTCGGTCGTCTCGGGGTCGGGAGGAAGG
AATGCGATAATTTGCGTCTAGTTAATGGAATGGTCAGGGGCTGTGACCGG
AGGGATGGATGCACTCGTACTATTTGCATTTCTTCCAGCCATCGAGAGCC
CCCCCCTTCTGCTATGTTTTTTTCTCTAGGCTAGCGAGAGCGCTCACCGT
TCCTCCTAACATATTCACCAACCCACCATTTACATCAGTCCAAGACATTG
TACCATGGGCAAGGACACGCGAGTCACTTACCAACGGCGTCATGCTTACG
CGACCAGGTCAAATGGGCGTGTTATTGTCAAGACTCCAGGTGGCCGACTG
ACTCTTCATCAAATTAAGAAGAAAACGCGCGGCCCTCACTGTGGTGACTG
CAAGATTGCCCTGCCAGGCATCAAGCACCTCAAAACCAAGGAATACAAGA
ACCTACACAAGCGAGAGCGCACGGTATCTAGGGCTTACGGTGGATCGCGA
TGCGCTTCCTGCGTCCGAAGTCGGATTGTGCGCGCGTTCTTAATCGAGGA
GCAAAAGATTGTGAAGCGAGTCTTGAACGAGAAGAAGTCCAAGAAGTAAC
GGGAGGGCGGATAGCAACAAGGGGGTGGACGAGGAGGGAAAAAACGCGAC
GAGAAGAGGAAGGTCGGGCGTCTGTATTGCAGCAGCGCATGGCTTGGCCC
GTCGGAGAGGGGCTGGTGGCTTTCGATGACGTTCGACGACGACCATAGGG
GAGGGAGGCCATGTAGCCCATCCGGAGGTACCAAGGGAAAGGAGCAGGGA
AGAAGATACAACAAATGGAGGACAGACAAGGCCTGCGTCCCAGAAAGAAT
GGGTGTGGGCCGGGCTGGCGGGAAGCAATTTTGTTTGCTTTGGCGGAAGC
ACAGTGCACGCACCTTTTCTT back to topprotein sequence of rna1163 >rna1163-protein ID=rna1163-protein|Name=rna1163|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
MPHGSLGSPSAHSQADLEAGGISPRAYRDGRAAEEQQGTVDGPGRETDRG
TDAHRKNGQAREERSPHLDRAVAKTFVGVGESSGGRERGAFPLPRDALPG
HDGGGGGRLDPTPGGPTAGEGTEEERGVGAVPRQPWGAGRRPKKKGAVTP
AAAGLGDKRSTSWDPAGRKGF back to topmRNA from alignment at CM002456.1:1365419..1366605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1163 ID=rna1163|Name=rna1163|organism=Nannochloropsis gaditana|type=mRNA|length=1187bp|location=Sequence derived from alignment at CM002456.1:1365419..1366605- (Nannochloropsis gaditana)
CGCCCGTCCTCCAGATCCAATGCCTCACGGATCGCTTGGAAGTCCTTCGG
CCCATTCTCAAGCTGATCTGGAAGCGGGAGGAATTTCTCCGAGAGCGTAC
AGAGGTATGTTCCATCGCCAGAAAATTACCATGCACACGCAAGCCACAGC
AACAAAAAGAGGGAAGGGACGTAAGCTCAGCACGTGCTTTTTCTTTCCCC
CCCCCGCCCTCCCTCCCTCCCCTCTTCCCCCTCCGGGGCCTGGCTCAGAT
GGAAGAGCTGCAGAAGAACAGCAAGGCACGGTTGACGGACCGGGGAGGGA
AACGGATCGAGGAACTGATGCGCATCGAAAAAATGGACAAGCACGTGAAG
AAAGATCTCCCCATCTTGACCGAGCGGTTGCGAAAACGTTTGTTGGAGTG
GGAGAAAGCTCCGGAGGAAGGGAACGGGGCGCCTTTCCTCTACCAAGGGA
TGCCCTACCTGGACACGATGGAGGCGGAGGAGGACGCCTGGATCCGACAC
CGGGAGGCCCAACGGCTGGAGAAGGAACAGAAGAAGAAAGAGGAGTTGGA
GCGGTACCGCGACAGCCATGGGGGGCCGGGCGGAGGTGTGGGGGGAGGGC
GGGAAGGAGGGCGGGAAGGTGGCGGCAACTTGTTGCCGCGTGCCTCCCTG
ATGGGCAGTGGGGTGAAAACTCCGGGAAAAAAAGCCGGAAGCGTCCTTCC
CTTGTCCGCCAGGAAAGGGGAAGGAGGAAGGGGAGGAGGGCGGGTCACCC
CCAGCAAAGTCCTGGGAGGGGAGCGCGGAGGACTCAAGACGCCGGTGGCC
GCCGTGAGAAGAGCCGTGGCAGCGGCGACGGCGGCCACCGGCGCGGCGTC
GGGGGCGGGGGATGAGAACCTGAGTGTGTGTAGCGGGACGTTCTCCGAGG
TCTCTTCCTCCTCCTCCTCTTCCTTCGCGTGAGGAGGGGGGGGAGGAGGA
GGCAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGTGACGGGGGGTGTACAA
TAGGAAAGCAAAGCGTGCGAGCCAGCGGCTGGGGAGGGACCAAGAGAATG
AAAAGTGAATTGATGGTGCCTGTGTTTTCATGTAATGCCAAAGACCAAAG
AAAAAGGGGGCCGTGACACCCGCCGCCGCCGGCCTCGGAGACAAGCGAAG
CACGTCCTGGGACCCTGCAGGGAGAAAGGGCTTCTGA back to topCoding sequence (CDS) from alignment at CM002456.1:1365419..1366605- >rna1163 ID=rna1163|Name=rna1163|organism=Nannochloropsis gaditana|type=CDS|length=1548bp|location=Sequence derived from alignment at CM002456.1:1365419..1366605- (Nannochloropsis gaditana)
ACCAAAGAAAAAGGGGGCCGTGACACCCGCCGCCGCCGGCCTCGGAGACA
AGCGAAGCACGTCCTGGGACCCTGCAGGGAGAAAGGGCTTCTGAATGGAA
GAGCTGCAGAAGAACAGCAAGGCACGGTTGACGGACCGGGGAGGGAAACG
GATCGAGGAACTGATGCGCATCGAAAAAATGGACAAGCACGTGAAGAAAG
ATCTCCCCATCTTGACCGAGCGGTTGCGAAAACGTTTGTTGGAGTGGGAG
AAAGCTCCGGAGGAAGGGAACGGGGCGCCTTTCCTCTACCAAGGGATGCC
CTACCTGGACACGATGGAGGCGGAGGAGGACGCCTGGATCCGACACCGGG
AGGCCCAACGGCTGGAGAAGGAACAGAAGAAGAAAGAGGAGTTGGAGCGG
TACCGCGACAGCCATGGGGGGCCGGGCGGAGATGCCTCACGGATCGCTTG
GAAGTCCTTCGGCCCATTCTCAAGCTGATCTGGAAGCGGGAGGAATTTCT
CCGAGAGCGTACAGAGACCAAAGAAAAAGGGGGCCGTGACACCCGCCGCC
GCCGGCCTCGGAGACAAGCGAAGCACGTCCTGGGACCCTGCAGGGAGAAA
GGGCTTCTGAATGGAAGAGCTGCAGAAGAACAGCAAGGCACGGTTGACGG
ACCGGGGAGGGAAACGGATCGAGGAACTGATGCGCATCGAAAAAATGGAC
AAGCACGTGAAGAAAGATCTCCCCATCTTGACCGAGCGGTTGCGAAAACG
TTTGTTGGAGTGGGAGAAAGCTCCGGAGGAAGGGAACGGGGCGCCTTTCC
TCTACCAAGGGATGCCCTACCTGGACACGATGGAGGCGGAGGAGGACGCC
TGGATCCGACACCGGGAGGCCCAACGGCTGGAGAAGGAACAGAAGAAGAA
AGAGGAGTTGGAGCGGTACCGCGACAGCCATGGGGGGCCGGGCGGAGATG
CCTCACGGATCGCTTGGAAGTCCTTCGGCCCATTCTCAAGCTGATCTGGA
AGCGGGAGGAATTTCTCCGAGAGCGTACAGAGACCAAAGAAAAAGGGGGC
CGTGACACCCGCCGCCGCCGGCCTCGGAGACAAGCGAAGCACGTCCTGGG
ACCCTGCAGGGAGAAAGGGCTTCTGAATGGAAGAGCTGCAGAAGAACAGC
AAGGCACGGTTGACGGACCGGGGAGGGAAACGGATCGAGGAACTGATGCG
CATCGAAAAAATGGACAAGCACGTGAAGAAAGATCTCCCCATCTTGACCG
AGCGGTTGCGAAAACGTTTGTTGGAGTGGGAGAAAGCTCCGGAGGAAGGG
AACGGGGCGCCTTTCCTCTACCAAGGGATGCCCTACCTGGACACGATGGA
GGCGGAGGAGGACGCCTGGATCCGACACCGGGAGGCCCAACGGCTGGAGA
AGGAACAGAAGAAGAAAGAGGAGTTGGAGCGGTACCGCGACAGCCATGGG
GGGCCGGGCGGAGATGCCTCACGGATCGCTTGGAAGTCCTTCGGCCCATT
CTCAAGCTGATCTGGAAGCGGGAGGAATTTCTCCGAGAGCGTACAGAG back to top
|