EWM29570.1, cds1134 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|585112141|gb|EWM29570.1| (hypothetical protein Naga_100006g31 [Nannochloropsis gaditana]) HSP 1 Score: 920.998 bits (2379), Expect = 0.000e+0 Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0 Query: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPSPPQLSPSPSLHFPRLVPISFLRGFYRVFVSSGCLEGQGRRYVPPSCSEICRRPLPLLPPSLLSLFSCRRSDGHVHAPATGRLGRNKNRASRPVGTHRRRVESGFLPRHPREAL 458 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPSPPQLSPSPSLHFPRLVPISFLRGFYRVFVSSGCLEGQGRRYVPPSCSEICRRPLPLLPPSLLSLFSCRRSDGHVHAPATGRLGRNKNRASRPVGTHRRRVESGFLPRHPREAL Sbjct: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPSPPQLSPSPSLHFPRLVPISFLRGFYRVFVSSGCLEGQGRRYVPPSCSEICRRPLPLLPPSLLSLFSCRRSDGHVHAPATGRLGRNKNRASRPVGTHRRRVESGFLPRHPREAL 458
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|585112140|gb|EWM29569.1| (hypothetical protein Naga_100006g31 [Nannochloropsis gaditana]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 Query: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-GPS 345 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL GP+ Sbjct: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPT 346
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1200561428|gb|OUW72662.1| (hypothetical protein CBD70_00895 [Actinobacteria bacterium TMED210]) HSP 1 Score: 166.777 bits (421), Expect = 4.205e-44 Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 0 Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRR--DKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPS 345 +SPS FKTCP+ ++F +++K+ EP +EV +G+ VH AL++LF P E R+ E LH++FR W K R D++ +LF S E++R +G+ GLKLL+NY+ +E P PL RE +R D ++ GILDR+D GE ++VDYK+GKAP KY + +FF LK+YALL+++ P LKLIYL S Sbjct: 4 NLSPSRASQFKTCPKQFKFANVDKLKEPTNEVQAKGTTVHQALEDLFDLPKEDRNXEKLHNLFREAWTKVRGTDEHHDLFSSVEEEREWGVDGLKLLNNYMTIEDPTSFNPLERERWVRGSIED-LNLRGILDRMD-RNEKGELIIVDYKSGKAPMAKYKEP--------RFFALKLYALLIKEELGEMPAELKLIYLKNS 194
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1200575562|gb|OUW86072.1| (hypothetical protein CBD81_00675 [bacterium TMED221]) HSP 1 Score: 164.081 bits (414), Expect = 3.709e-43 Identity = 88/201 (43.78%), Postives = 127/201 (63.18%), Query Frame = 0 Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW--LKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPS 345 +SPS FKTCP+ ++F +++KI EP + V +G+ VH AL++L+ P ++R+ EVL+D+FR W ++ D+++ LF S ED+R +G GL LL NYLK+E P + EPL +E +R D ++ GILDR+D E G ++VDYK+GKAP KY + +FF LK+YALL+ TP LKLIYL S Sbjct: 4 NLSPSRASQFKTCPKQFKFSNVDKIKEPTNLVQAKGTTVHQALEDLYDLPIDQRTPEVLYDLFRKAWSNVRGNDEHVNLFDSIEDEREWGQEGLNLLHNYLKLEDPQKLEPLEQERWVRGSIED-LNLRGILDRMD-EDKDGNLIIVDYKSGKAPMAKYKEP--------RFFALKLYALLIRDEIGVTPKELKLIYLKNS 194
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1082232830|gb|OFW53503.1| (hypothetical protein A2V75_08180 [Actinobacteria bacterium RBG_16_70_17]) HSP 1 Score: 162.155 bits (409), Expect = 4.021e-43 Identity = 92/210 (43.81%), Postives = 129/210 (61.43%), Query Frame = 0 Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLK-RRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-GPSPPQLSPSPS 354 T+SPS GDFK CP+L+RFR ++++PEPP+ RG+ H AL LF P +R+ E L+D+FR W++ R +Y +LF S E++RA+G+ L++L+NY VE P+ +PL RE + DG ++ GILDR++ P G + DYKTGKAP ER FF LK YALL+ + R P L+LIYL GP QL +P+ Sbjct: 5 TLSPSRAGDFKHCPQLFRFRAIDRLPEPPTTYQARGTTSHLALQRLFDLPASQRTPEALYDLFRRAWVEVRGTEYPDLFTSVEEERAWGLESLQILANYFAVEDPSTFDPLAREMDLLEDL-DGITIRGILDRMENTP-DGRLAISDYKTGKAPP--------ERYALPAFFALKTYALLVRRRTGRAPDLLRLIYLNGPVVYQLEVNPA 204
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1082263851|gb|OFW67348.1| (hypothetical protein A2Z12_06495 [Actinobacteria bacterium RBG_16_68_21]) HSP 1 Score: 158.688 bits (400), Expect = 1.007e-41 Identity = 88/201 (43.78%), Postives = 123/201 (61.19%), Query Frame = 0 Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLE-LFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-GPS 345 T+SPS DFK CP+L++FR ++++PEP + RG+ H AL LF P E+R+ + L+D+FR W + R E LF S ED+RA+G+ L+LL+NY +E P +PL RE M DG + GILDR++ P G V+ DYKTGKAP +Y+ FF LK+YALL+ + RTP +KL+YL GP+ Sbjct: 5 TLSPSRASDFKHCPQLFKFRAIDRLPEPATVYQARGTTAHLALQRLFDLPAEQRTPDTLYDLFRQAWAEIRGIEFEGLFSSVEDERAWGLESLELLANYFSIEDPTSFDPLDRELDMLEDL-DGIIIRGILDRMEEAP-DGSLVITDYKTGKAPPERYALPA--------FFALKIYALLIRRRTGRTPAEIKLMYLNGPT 195
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1200596495|gb|OUX06068.1| (hypothetical protein CBE04_02620 [Actinobacteria bacterium TMED244]) HSP 1 Score: 155.606 bits (392), Expect = 5.409e-40 Identity = 84/199 (42.21%), Postives = 123/199 (61.81%), Query Frame = 0 Query: 149 SPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW--LKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLGPS 345 SPS F TCP+ ++F +++KI EP + V +G+ VH A ++L+S P E+R+ + L+++FR W ++ D+++ LF S E++R +G GL LL NYLK+E P EPL +E +R D ++ GILDR+D E G V+VDYK+GK+P KY + +FF LK+YALL+ TP LKLIYL S Sbjct: 6 SPSRASQFXTCPKQFKFSNVDKIKEPTNLVQAKGTTVHQAXEDLYSLPSEERTSDTLYNLFRKAWSNVRGNDEHVNLFNSIEEEREWGQEGLNLLHNYLKLENPKTLEPLEQERWVRGSIED-LNLRGILDRMD-EDKDGNLVIVDYKSGKSPLAKYKEP--------RFFALKLYALLIRDELGVTPVELKLIYLKNS 194
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1155045427|ref|WP_078950466.1| (recombinase RecB [Streptomyces lavendulae]) HSP 1 Score: 146.747 bits (369), Expect = 5.257e-37 Identity = 88/221 (39.82%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 131 TIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFPSTEDQRAFGMA-----GLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLG 343 T P A +P+ PT++SPS GDF CP LYRFR ++K+PE PS RG++VH L+ LF P +R+ V + W L+ + + ELFP E G+A L+ + +E P EP+ REF + G + GI+DRVDV P SGE +VDYKTGKAP +Y++ FQ+K YAL++ ++KQ P RL+L+YLG Sbjct: 2 TTIPGADPSPAAARPTSLSPSRAGDFMQCPLLYRFRVIDKLPEKPSAAATRGTLVHAVLERLFDHPAAERTAPVAKALVPGQWDRLLQAKPELAELFP--EGDEGAGLARWLTEAEALVERWFTLEDPTRLEPVEREFFVETELESGLRLRGIIDRVDVAP-SGEVRIVDYKTGKAPRPEYAEGA--------LFQMKFYALVVWRLKQVVPRRLQLVYLG 211
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1158991215|ref|WP_079161029.1| (recombinase RecB [Streptomyces sp. NRRL S-98]) HSP 1 Score: 144.821 bits (364), Expect = 2.273e-36 Identity = 85/216 (39.35%), Postives = 120/216 (55.56%), Query Frame = 0 Query: 139 APSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFPSTEDQRAFGMAGL--------KLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLG 343 +PS P+++SPS DF CP LYRFR ++K+PE PS RG++VH L+ LF P ++R+ ++ W L R + ELFP + G AGL L+ + +E P EP+ REF + G + GI+DRVDV P +GE +VDYKTGKAP +Y+D FQ+K YAL++ ++KQ P RL+L+YLG Sbjct: 16 SPSAVAPSSLSPSRASDFMQCPLLYRFRVIDKLPEKPSAAATRGTLVHAVLERLFDHPAQERTAPRAKELIPGQWDRLLGSRPELAELFPEGD-----GGAGLARWLTEAEALVERWFTLEDPTRLEPVEREFFVETELESGLRLRGIIDRVDVAP-TGEVRIVDYKTGKAPRAEYADGA--------LFQMKFYALVVWRLKQVVPRRLQLVYLG 217
BLAST of EWM29570.1 vs. NCBI_GenBank
Match: gi|1155054397|ref|WP_078959436.1| (recombinase RecB [Streptomyces erythrochromogenes]) HSP 1 Score: 145.591 bits (366), Expect = 2.627e-36 Identity = 82/212 (38.68%), Postives = 120/212 (56.60%), Query Frame = 0 Query: 138 IAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFPSTEDQRAFG---MAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLG 343 +APS P+++SPS DF CP LYRFR ++K+PE PS RG++VH L+ LF P ++R+ ++ W L+ R + ELFP ++ A L+ + +E P EP+ REF + G + GI+DRVDV P +GE +VDYKTGKAP +Y++ FQ+K YAL++ ++KQ P RL+L+YLG Sbjct: 28 VAPSAVAPSSLSPSRASDFMQCPLLYRFRVIDKLPEKPSAAATRGTLVHAVLERLFDHPAQERTAPRAKELIPGQWDRLLESRPELTELFPEGDEGAALARWLTEAEALVERWFTLEDPTRLEPVEREFFVETELESGLRLRGIIDRVDVAP-TGEVRIVDYKTGKAPRPEYAEGA--------LFQMKFYALVVWRLKQVVPRRLQLVYLG 230 The following BLAST results are available for this feature:
BLAST of EWM29570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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