EWM29528.1, cds1096 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|585112099|gb|EWM29528.1| (hypothetical protein Naga_100006g70 [Nannochloropsis gaditana]) HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query: 1 MRQRTIIIPTTLWTLVMQLVVGNCAATRCSSSCFLSSSALFSSVHGGRKVPLHQQFRLHSRNMMAYSNKHGSTGRRRVKDVLRPPLPPQTAVQGNKWAEEISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSEEPGRQRG 379
MRQRTIIIPTTLWTLVMQLVVGNCAATRCSSSCFLSSSALFSSVHGGRKVPLHQQFRLHSRNMMAYSNKHGSTGRRRVKDVLRPPLPPQTAVQGNKWAEEISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSEEPGRQRG
Sbjct: 1 MRQRTIIIPTTLWTLVMQLVVGNCAATRCSSSCFLSSSALFSSVHGGRKVPLHQQFRLHSRNMMAYSNKHGSTGRRRVKDVLRPPLPPQTAVQGNKWAEEISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSEEPGRQRG 379
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|585112234|gb|EWM29660.1| (hypothetical protein Naga_100112g16 [Nannochloropsis gaditana]) HSP 1 Score: 183.726 bits (465), Expect = 2.803e-49 Identity = 109/271 (40.22%), Postives = 154/271 (56.83%), Query Frame = 0
Query: 105 SLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPG---GINFFFPFAAAGLALTNTAFLPYLILRP--LHKVDKPVMQEEVPEIELKLGESK-PLLSVYGVAGLYSIWWAFFGRPEFGG--LTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLL 367
SL + +P ++ +PL + + +VF+S APG LD A V L+LN++ V+P+L P +P P +EG+FNLLLA+AAL SGF+VDG+ A + G N F P+ LTN +LPYL+LR D+P + LGESK P L GV GL S+ WA R E G L+ERW SF ++++DRL F+F+V+ + +W+FQGWL+DDD+ RR + + K +PFLGL Y++ RPPLL
Sbjct: 266 SLIGRLLDEP-RKAVPLAAFIFYCWFVFLSTVAPGPNALSLDPATWAEVRDLSLNFWLVMPSLAPQSSPVLHPCLEGLFNLLLAWAALFSGFMVDGKVAGESTQARKTGEGRGGAKNAFLPYVLGMQLLTNAVYLPYLVLRKNVWKPADEPAGEGYTLTKAEALGESKIPPLVFIGV-GLLSLAWAGLARGEVYGVELSERWRSFVQILTTDRLTFSFAVDLLYFWVFQGWLLDDDIERRGGEVGKISLSLFKAIPFLGLGAYLMTRPPLL 534
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|1210229271|dbj|BAZ48292.1| (conserved hypothetical membrane protein [Nostoc sp. NIES-4103]) HSP 1 Score: 163.696 bits (413), Expect = 2.048e-44 Identity = 99/275 (36.00%), Postives = 150/275 (54.55%), Query Frame = 0
Query: 101 ISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILR---PLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSE 372
I S QK T ++ T + +VGY+ +S PG + S L+ + GL+LN++ VLP + P++AP +P +EG+FN+++ +A L GF++DGR P PF LTN FLP+L LR P D E K+ ES+ L + G+ + S+ W F RPE+G LT R+++ +L+S+DRL ++F ++ ++W+FQ WLV DDM RR + V+ W+ + VPFLGL VY+ RPPL QQ +
Sbjct: 10 IKTFSFPQKDTSVTLSKIFLWSTWLIYVGYLLLSDLPPGLSLLHITSETLQEIWGLSLNFWLVLPIVSPNVAPVLNPALEGLFNIVVTWAILFWGFVIDGRNQRFPI-------------IPFLIGTALLTNVFFLPWLALRQPNPQPPTDSLTFVE-------KIAESRILPAFLGMIFVVSLVWGAFARPEYGDLTTRFSALLELLSTDRLAYSFLIDFFVFWLFQSWLVKDDMARRNWCNPTVL-WVVRLVPFLGLVVYLWRRPPLAVQQMK 263
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|397568380|gb|EJK46109.1| (hypothetical protein THAOC_35242 [Thalassiosira oceanica]) HSP 1 Score: 168.318 bits (425), Expect = 3.853e-43 Identity = 111/272 (40.81%), Postives = 155/272 (56.99%), Query Frame = 0
Query: 105 SLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNM----LDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWI---AKTVPFLGLFVYMLWRPPLLSQ 369
++K KF +P R IPL V +VGY+F A G +P + L+ + V L+LN+F V P L AP P +EGVFNLLL++AAL +GFL D R+ D P + F P LT+ LPYL LR ++ ++ E++ K+ E +PL + G G SIWW FGRPEFG L+ER+ASF DL+S DR+ +F V+ V++ +FQ W VDDD++RR + + +P + AK VPF GL Y+ RPPL S+
Sbjct: 348 TVKAKFVAEPV-RFIPL---VIWVGYMFELFIADGPLPGVNALALEQRTWEEVRDLSLNFFLVSPILQLPFAPTVHPCLEGVFNLLLSWAALFAGFLSDERK---------DKPNLLPFG-PMLVGMQFLTSGFLLPYLFLRTPETSEEVYREDIDGELQAKVAEWRPLGPMLGSVGSLSIWWFLFGRPEFGELSERYASFMDLLSIDRVGSSFLVDLVIFAVFQSWFVDDDLQRR-GIGKDELPLLRNTAKYVPFFGLASYLTVRPPLASR 604
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|917774367|ref|WP_052288308.1| (hypothetical protein [Lyngbya confervoides]) HSP 1 Score: 152.14 bits (383), Expect = 5.076e-40 Identity = 97/281 (34.52%), Postives = 146/281 (51.96%), Query Frame = 0
Query: 88 PQTAVQGNKWAEEISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSA--VLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPL 366
P TA Q + ISP S P+QR + V +VGY+ +S PG P++L ++ L+ G L+LN++ VLP L P AP P +EG+FN+++ + L GF ++GRQ P PF LTN +LP+L LR + D+P E + ES+ + L +I W +GR +FG +++RW +V SDRL ++F ++ +++W+FQGWLV DDM RR + V W A+ +P GL +Y L RPP+
Sbjct: 10 PATASQPA--SANISPVSEAASTHSSPWQRGGVWLAWVVYVGYLLLSDLPPG--PSLLHTSPDTLREAGALSLNFWFVLPALFPAQAPTLHPALEGLFNVVVTWGLLFWGFAIEGRQQRVP-------------MLPFLIGTAFLTNVFYLPWLGLRQSRR-DRPTRPLNRLE---TITESRAYPIALMIILLAAIAWGLWGRADFGSISDRWTDLVQIVQSDRLAYSFWIDLLVFWLFQGWLVPDDMARRQW-QDPVALWSARLIPAFGLVIYFLRRPPI 268
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|746959185|gb|KIF16724.1| (hypothetical protein QP59_26885 [Aphanocapsa montana BDHKU210001] >gi|746986039|gb|KIF41731.1| hypothetical protein QQ91_19835 [Lyngbya confervoides BDU141951]) HSP 1 Score: 149.058 bits (375), Expect = 5.365e-39 Identity = 92/268 (34.33%), Postives = 141/268 (52.61%), Query Frame = 0
Query: 101 ISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSA--VLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPL 366
+SP S P+QR + V +VGY+ +S PG P++L ++ L+ G L+LN++ VLP L P AP P +EG+FN+++ + L GF ++GRQ P PF LTN +LP+L LR + D+P E + ES+ + L +I W +GR +FG +++RW +V SDRL ++F ++ +++W+FQGWLV DDM RR + V W A+ +P GL +Y L RPP+
Sbjct: 1 MSPVSEAASTHSSPWQRGGVWLAWVVYVGYLLLSDLPPG--PSLLHTSPDTLREAGALSLNFWFVLPALFPAQAPTLHPALEGLFNVVVTWGLLFWGFAIEGRQQRVP-------------MLPFLIGTAFLTNVFYLPWLGLRQSRR-DRPTRPLNRLE---TITESRAYPIALMIILLAAIAWGLWGRADFGSISDRWTDLVQIVQSDRLAYSFWIDLLVFWLFQGWLVPDDMARRQW-QDPVALWSARLIPAFGLVIYFLRRPPI 248
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|497242530|ref|WP_009556752.1| (hypothetical protein [Oscillatoriales cyanobacterium JSC-12] >gi|410712338|gb|EKQ69844.1| hypothetical protein OsccyDRAFT_2489 [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 149.058 bits (375), Expect = 6.875e-39 Identity = 86/240 (35.83%), Postives = 131/240 (54.58%), Query Frame = 0
Query: 125 VTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRP 364
+ +VGY+ +S PG+ + L+T L+LN++ VLP L P+LAP +P +EG+FN+++A+ L GFL+DGR P PF LTN +LP+L LR + + + +E + ES+ + + S+ WA F RPEF + RW S L++ DRL ++F + ++W+FQ WLV DDM+RR ++ WIA+ VPF GL +Y+LWRP
Sbjct: 31 IGYVGYLLLSDLPPGNSLLHSEPETLQTAIALSLNFWFVLPVLFPNLAPVLNPALEGLFNIVVAWGLLFWGFLLDGRNQRVP-------------MIPFLLGTALLTNVFYLPWLGLR---QPNPAPATTALTRLE-RFAESRMIPIALSLVFGASLAWAAFARPEFSTWSNRWNSLLTLITGDRLAYSFWFDLWVFWVFQAWLVPDDMQRRNG-HNSILIWIARLVPFFGLVIYLLWRP 252
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|1011382362|ref|WP_062295112.1| (hypothetical protein [Nostoc piscinale] >gi|930352131|gb|ALF54576.1| hypothetical protein ACX27_19760 [Nostoc piscinale CENA21]) HSP 1 Score: 148.673 bits (374), Expect = 8.581e-39 Identity = 84/249 (33.73%), Postives = 138/249 (55.42%), Query Frame = 0
Query: 125 VTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSEE 373
+ +VGY+ +S PG + + L+ + L++N++ VLP + P AP +P +EG+FN+++++ L GF++DGR P F LTN FLP+L LR + + + + +E K+GES+ L V + S+ WA GRPE+G +T RW +L+ SDRL ++F V+ +++W+FQ WLV DDM RR +E ++ W+ + +PF GL +Y+ RP L ++ E
Sbjct: 30 LVYVGYLLLSDIPPGESLLHITTKTLEEIFNLSMNFWLVLPIIFPTEAPVSNPTLEGLFNIVMSWGLLFWGFIIDGRNQRFPI-------------ITFLLGTALLTNVFFLPWLGLR---QANPQAPKNALTFVE-KVGESRVLPLVLAGVFVVSLSWAVLGRPEYGDITTRWQGLLELLFSDRLAYSFVVDMLVFWLFQSWLVKDDMARRQWNNEKIL-WLVRLIPFWGLIIYLWLRPSLKLEEQEN 260
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|1056306743|ref|WP_067764201.1| (hypothetical protein [Nostoc sp. NIES-3756] >gi|953508955|dbj|BAT51643.1| hypothetical protein NOS3756_05700 [Nostoc sp. NIES-3756]) HSP 1 Score: 147.132 bits (370), Expect = 3.414e-38 Identity = 91/271 (33.58%), Postives = 140/271 (51.66%), Query Frame = 0
Query: 102 SPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQSE 372
SP LK+ + R++ + ++GY+ +S PG + S L+ + L+ N++ VLP + P AP +P +EG+FN+++ + L GF++DGR PF LTN FLP+L LR P + I K+GES+ SV + + WA F RPE+G L RW + +L+ +DRL ++F ++ +++W+FQ WLV DDM RR +E V+ WI + VPF GL +Y RP L QS+
Sbjct: 4 SPNFLKKDISLT-LSRILIWTVWLIYIGYLLLSDLPPGLSLLHITSQTLQEIIDLSWNFWFVLPLISPTEAPVNNPALEGLFNIVVTWGLLFWGFVIDGRNQRFSI-------------IPFLIGTAFLTNLFFLPWLGLRQ----PNPQVSTNDLTIAEKVGESRIFTSVLALVFVLCCIWAGFARPEYGDLPTRWEALLNLLFTDRLAYSFLIDMLVFWLFQSWLVKDDMARRQWHNEQVL-WIVRLVPFWGLIIYFWQRPSLTIAQSK 255
BLAST of EWM29528.1 vs. NCBI_GenBank
Match: gi|740238361|ref|WP_038079474.1| (hypothetical protein [Tolypothrix bouteillei] >gi|744451668|gb|KIE12337.1| hypothetical protein DA73_0212400 [Tolypothrix bouteillei VB521301]) HSP 1 Score: 145.591 bits (366), Expect = 1.469e-37 Identity = 85/242 (35.12%), Postives = 131/242 (54.13%), Query Frame = 0
Query: 125 VTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKPVMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRRAAVSEGVVPWIAKTVPFLGLFVYMLWRPPL 366
+ ++GY+ +S PG + + L+LN++ V+P L P AP +P +EG+FN+++ + L GFLVDGR P PF LTN +LP+L +R + + ++ + +E K+ ES+ V + S+ WA RPEFG LT RW S ++S+DRL ++F ++ V++WIFQ WLV DDM RR + + WI + VPF+GL V++L RP L
Sbjct: 33 IIYIGYLLLSDLPPGLSVLHIQPKTFQEALDLSLNFWFVMPLLSPSTAPVINPALEGLFNIVITWGLLFWGFLVDGRNQRFPM-------------LPFLIGTALLTNVFYLPWLAIR---QPNTQPPKDSLNTLE-KIAESRAFPLVLTGVVVASLAWAMLARPEFGNLTARWTSLIKILSTDRLAYSFLIDFVVFWIFQSWLVPDDMARRHW-QDPTILWIVRFVPFVGLVVFLLRRPSL 256 The following BLAST results are available for this feature:
BLAST of EWM29528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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