EWM29619.1, cds1054 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29619.1 vs. NCBI_GenBank
Match: gi|585112191|gb|EWM29619.1| (sentrin-specific protease 2 [Nannochloropsis gaditana]) HSP 1 Score: 1447.95 bits (3747), Expect = 0.000e+0 Identity = 712/712 (100.00%), Postives = 712/712 (100.00%), Query Frame = 0
Query: 1 MGPGRDEIWKGTDDEGQASCQARRGPLAYAKAPPAELYRAKDGGREELQDKESCTGGKEQGVAERGREREAEEAREEAAISMESCLTFLLEGAEQEAFVAARHFLGDHGGVQGRKEGARDRNEEMGESMLGGGALAALADERMGRRTRPGALSSLSPVTGPLAGGGGSKIGGKGKHYQFTEEGLQDVILRLLRDEMLSDEVLNRALDMMAHTPVAEAAVLLNTFWYEKIKEGKYVEAKAWLERALGGRSKASLRLVCVPINIANAHWVLVFADLVRNTVQEWDPASATGPLDPSRLKNVKDALEKFFGFEKLKRPPLALVPAPAGLPQQPDAVNCGVFVVIYLIQICFVREFTLILDPNDWPGRAVQDGGQGGEGGQEGGQTRLGGGPVADPPIAESARQLRGQGIATKLALVPPCMLRVSENDLLRYRLFLLALILHSQTSHLSRTDPVLLSFVSEKRRDWRMETDSLGAFPPTSTPLRSEHGVGGRGRGESDRKDMEMQRHLLLSLARDKSNDEAMQSLFLQAAMSLLNRFSSDGRIVFVSPCWYESLVAGNIRRSIAIMEKLSLANVEVLCLPIYHPGAGGWILARVSLLEEIKSIYLHGTHALGEAEHIFPFVERGLQALLEGHHKLHWRQLAQPLELVPHAHQVPVALVLLSMHILRKGPDARAPSGELTNNWGSSSMPGLRFDDQHTYFSAKVGILRWLLRHTSRA 712
MGPGRDEIWKGTDDEGQASCQARRGPLAYAKAPPAELYRAKDGGREELQDKESCTGGKEQGVAERGREREAEEAREEAAISMESCLTFLLEGAEQEAFVAARHFLGDHGGVQGRKEGARDRNEEMGESMLGGGALAALADERMGRRTRPGALSSLSPVTGPLAGGGGSKIGGKGKHYQFTEEGLQDVILRLLRDEMLSDEVLNRALDMMAHTPVAEAAVLLNTFWYEKIKEGKYVEAKAWLERALGGRSKASLRLVCVPINIANAHWVLVFADLVRNTVQEWDPASATGPLDPSRLKNVKDALEKFFGFEKLKRPPLALVPAPAGLPQQPDAVNCGVFVVIYLIQICFVREFTLILDPNDWPGRAVQDGGQGGEGGQEGGQTRLGGGPVADPPIAESARQLRGQGIATKLALVPPCMLRVSENDLLRYRLFLLALILHSQTSHLSRTDPVLLSFVSEKRRDWRMETDSLGAFPPTSTPLRSEHGVGGRGRGESDRKDMEMQRHLLLSLARDKSNDEAMQSLFLQAAMSLLNRFSSDGRIVFVSPCWYESLVAGNIRRSIAIMEKLSLANVEVLCLPIYHPGAGGWILARVSLLEEIKSIYLHGTHALGEAEHIFPFVERGLQALLEGHHKLHWRQLAQPLELVPHAHQVPVALVLLSMHILRKGPDARAPSGELTNNWGSSSMPGLRFDDQHTYFSAKVGILRWLLRHTSRA
Sbjct: 1 MGPGRDEIWKGTDDEGQASCQARRGPLAYAKAPPAELYRAKDGGREELQDKESCTGGKEQGVAERGREREAEEAREEAAISMESCLTFLLEGAEQEAFVAARHFLGDHGGVQGRKEGARDRNEEMGESMLGGGALAALADERMGRRTRPGALSSLSPVTGPLAGGGGSKIGGKGKHYQFTEEGLQDVILRLLRDEMLSDEVLNRALDMMAHTPVAEAAVLLNTFWYEKIKEGKYVEAKAWLERALGGRSKASLRLVCVPINIANAHWVLVFADLVRNTVQEWDPASATGPLDPSRLKNVKDALEKFFGFEKLKRPPLALVPAPAGLPQQPDAVNCGVFVVIYLIQICFVREFTLILDPNDWPGRAVQDGGQGGEGGQEGGQTRLGGGPVADPPIAESARQLRGQGIATKLALVPPCMLRVSENDLLRYRLFLLALILHSQTSHLSRTDPVLLSFVSEKRRDWRMETDSLGAFPPTSTPLRSEHGVGGRGRGESDRKDMEMQRHLLLSLARDKSNDEAMQSLFLQAAMSLLNRFSSDGRIVFVSPCWYESLVAGNIRRSIAIMEKLSLANVEVLCLPIYHPGAGGWILARVSLLEEIKSIYLHGTHALGEAEHIFPFVERGLQALLEGHHKLHWRQLAQPLELVPHAHQVPVALVLLSMHILRKGPDARAPSGELTNNWGSSSMPGLRFDDQHTYFSAKVGILRWLLRHTSRA 712
BLAST of EWM29619.1 vs. NCBI_GenBank
Match: gi|1032153928|gb|OAO17212.1| (sentrin-specific protease [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 66.6254 bits (161), Expect = 3.329e-8 Identity = 42/162 (25.93%), Postives = 73/162 (45.06%), Query Frame = 0
Query: 197 LSDEVLNRALDMMAHTPVAE--AAVLLNTFWYEKIKEGKYVEAKAWLERALGGRSKASLRLVCVPINIANAHWVLVFADLVRNTVQEWDPASATGPLDPSRLKNVKDALEKFF---GFEKLKRPPLALVPAPAGLPQQPDAVNCGVFVVIYLIQICFVREFT 353
L+D ++N + + + + N+F+Y+K+ E Y W ++ S +V VP+N+ N HW L D+ + ++ D S G + L+N+ D L+K E+L R +L + +PQQ + +CGVF + I C F
Sbjct: 147 LNDNIINCTVQLAQERALRKGIQCHCFNSFFYKKLSESGYSSVSRWTKKV----DLFSKDVVIVPVNLHNTHWTLAVMDMKKKEIRYCDSMSGNG---STILRNLIDYLQKESMDKKKEELNRSEWSLRDMRSTIPQQQNCSDCGVFTCMNAILSCLCLPFN 301 The following BLAST results are available for this feature:
BLAST of EWM29619.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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